RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 RPL36ALQ969Q0 106 aaKnown RBP8.59□□□□□ -1.03
LSM5-201ENST00000223084 PGLYRP4Q96LB8 373 aa8.59□□□□□ -1.03
LSM5-201ENST00000223084 HECTD4Q9Y4D8 3996 aa8.58□□□□□ -1.04
LSM5-201ENST00000223084 TRBV7-3A0A075B6L6 115 aa8.58□□□□□ -1.04
LSM5-201ENST00000223084 TRAV9-2A0A087WT02 112 aa8.58□□□□□ -1.04
LSM5-201ENST00000223084 RPL23P62829 140 aaKnown RBP8.58□□□□□ -1.04
LSM5-201ENST00000223084 TWIST1Q15672 202 aa8.58□□□□□ -1.04
LSM5-201ENST00000223084 FAM74A3Q4VXF1 159 aa8.58□□□□□ -1.04
LSM5-201ENST00000223084 SUMO4Q6EEV6 95 aa8.58□□□□□ -1.04
LSM5-201ENST00000223084 WDR73Q6P4I2 378 aa8.58□□□□□ -1.04
LSM5-201ENST00000223084 UQCC3Q6UW78 93 aa8.58□□□□□ -1.04
LSM5-201ENST00000223084 OR10G8Q8NGN5 311 aa8.58□□□□□ -1.04
LSM5-201ENST00000223084 OSTCQ9NRP0 149 aa8.58□□□□□ -1.04
LSM5-201ENST00000223084 TRGC1P0CF51 173 aa8.57□□□□□ -1.04
LSM5-201ENST00000223084 FOXA3P55318 350 aaPredicted RBP8.57□□□□□ -1.04
LSM5-201ENST00000223084 ADIRFQ15847 76 aa8.57□□□□□ -1.04
LSM5-201ENST00000223084 CT83Q5H943 113 aa8.57□□□□□ -1.04
LSM5-201ENST00000223084 LINC01556Q5JQF7 62 aa8.57□□□□□ -1.04
LSM5-201ENST00000223084 Q6ZRN7 208 aaPredicted RBP8.57□□□□□ -1.04
LSM5-201ENST00000223084 ISOC2Q96AB3 205 aa8.57□□□□□ -1.04
LSM5-201ENST00000223084 CNFNQ9BYD5 112 aa8.57□□□□□ -1.04
LSM5-201ENST00000223084 DPH3P1Q9H4G8 78 aa8.57□□□□□ -1.04
LSM5-201ENST00000223084 NAT8Q9UHE5 227 aa8.57□□□□□ -1.04
LSM5-201ENST00000223084 A0A087WWC5 75 aa8.56□□□□□ -1.04
LSM5-201ENST00000223084 M0QY20 66 aa8.56□□□□□ -1.04
LSM5-201ENST00000223084 COMMD7Q86VX2 200 aa8.56□□□□□ -1.04
LSM5-201ENST00000223084 TSKUQ8WUA8 353 aa8.56□□□□□ -1.04
LSM5-201ENST00000223084 V9GYV3 84 aa8.56□□□□□ -1.04
LSM5-201ENST00000223084 PKD1P98161 4303 aa8.56□□□□□ -1.04
LSM5-201ENST00000223084 DNAH11Q96DT5 4516 aa8.56□□□□□ -1.04
LSM5-201ENST00000223084 HIGD1CA8MV81 97 aa8.55□□□□□ -1.04
LSM5-201ENST00000223084 BTF3P20290 206 aaKnown RBP8.55□□□□□ -1.04
LSM5-201ENST00000223084 C10orf126Q8N4M7 172 aa8.55□□□□□ -1.04
LSM5-201ENST00000223084 C15orf54Q8N8G6 183 aa8.55□□□□□ -1.04
LSM5-201ENST00000223084 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
LSM5-201ENST00000223084 PKHD1P08F94 4074 aa8.54□□□□□ -1.04
LSM5-201ENST00000223084 TRAV26-2A0A0B4J265 109 aa8.53□□□□□ -1.04
LSM5-201ENST00000223084 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
LSM5-201ENST00000223084 H7C1H1 209 aa8.53□□□□□ -1.04
LSM5-201ENST00000223084 K7EP13 123 aa8.53□□□□□ -1.04
LSM5-201ENST00000223084 RASL11AQ6T310 242 aa8.53□□□□□ -1.04
LSM5-201ENST00000223084 DAZ4Q86SG3 579 aaKnown RBP8.53□□□□□ -1.04
LSM5-201ENST00000223084 GFRA4Q9GZZ7 299 aa8.53□□□□□ -1.04
LSM5-201ENST00000223084 Q9HAA7 133 aa8.53□□□□□ -1.04
LSM5-201ENST00000223084 DAZ3Q9NR90 486 aaKnown RBP8.53□□□□□ -1.04
LSM5-201ENST00000223084 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.05
LSM5-201ENST00000223084 A0A1B0GUT8 65 aa8.52□□□□□ -1.05
LSM5-201ENST00000223084 NDUFA5Q16718 116 aa8.52□□□□□ -1.05
LSM5-201ENST00000223084 NTM-AS1Q6ZSK4 140 aa8.52□□□□□ -1.05
LSM5-201ENST00000223084 SMIM15Q7Z3B0 74 aa8.52□□□□□ -1.05
LSM5-201ENST00000223084 NFE4Q86UQ8 179 aa8.52□□□□□ -1.05
LSM5-201ENST00000223084 NIT1Q86X76 327 aa8.52□□□□□ -1.05
LSM5-201ENST00000223084 GATD1Q8NB37 220 aa8.52□□□□□ -1.05
LSM5-201ENST00000223084 NUP35Q8NFH5 326 aa8.52□□□□□ -1.05
LSM5-201ENST00000223084 DEFB104AQ8WTQ1 72 aa8.52□□□□□ -1.05
LSM5-201ENST00000223084 BORCS7Q96B45 105 aa8.52□□□□□ -1.05
LSM5-201ENST00000223084 DNAJC30Q96LL9 226 aa8.52□□□□□ -1.05
LSM5-201ENST00000223084 FAM231BA6NCW3 169 aa8.51□□□□□ -1.05
LSM5-201ENST00000223084 NIT2Q9NQR4 276 aa8.51□□□□□ -1.05
LSM5-201ENST00000223084 TMEM262E9PQX1 116 aa8.5□□□□□ -1.05
LSM5-201ENST00000223084 SPATA12Q7Z6I5 190 aa8.5□□□□□ -1.05
LSM5-201ENST00000223084 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.5□□□□□ -1.05
LSM5-201ENST00000223084 RPL39LQ96EH5 51 aaKnown RBP8.5□□□□□ -1.05
LSM5-201ENST00000223084 URGCP-MRPS24S4R325 110 aa8.5□□□□□ -1.05
LSM5-201ENST00000223084 SMIM27A0A1W2PRY6 76 aa8.49□□□□□ -1.05
LSM5-201ENST00000223084 TMEM218A2RU14 115 aa8.49□□□□□ -1.05
LSM5-201ENST00000223084 GAS8-AS1O95177 125 aa8.49□□□□□ -1.05
LSM5-201ENST00000223084 FUSP35637 526 aaKnown RBP eCLIP8.49□□□□□ -1.05
LSM5-201ENST00000223084 KRTAP10-2P60368 255 aa8.49□□□□□ -1.05
LSM5-201ENST00000223084 CHCHD5Q9BSY4 110 aa8.49□□□□□ -1.05
LSM5-201ENST00000223084 NAT8BQ9UHF3 227 aa8.49□□□□□ -1.05
LSM5-201ENST00000223084 KLK12Q9UKR0 248 aa8.49□□□□□ -1.05
LSM5-201ENST00000223084 A0A087WX48 190 aa8.48□□□□□ -1.05
LSM5-201ENST00000223084 RIGQ13278 110 aa8.48□□□□□ -1.05
LSM5-201ENST00000223084 RNF185Q96GF1 192 aa8.48□□□□□ -1.05
LSM5-201ENST00000223084 SEC11CQ9BY50 192 aa8.48□□□□□ -1.05
LSM5-201ENST00000223084 TMEM191AQ9H0A3 160 aa8.48□□□□□ -1.05
LSM5-201ENST00000223084 TRBV25-1A0A075B6N4 114 aa8.47□□□□□ -1.05
LSM5-201ENST00000223084 A0A087WTM6 91 aa8.47□□□□□ -1.05
LSM5-201ENST00000223084 C16orf90A8MZG2 172 aa8.47□□□□□ -1.05
LSM5-201ENST00000223084 PSCAO43653 123 aa8.47□□□□□ -1.05
LSM5-201ENST00000223084 PNRC1Q12796 327 aaPredicted RBP8.47□□□□□ -1.05
LSM5-201ENST00000223084 GAGE6Q13070 117 aa8.47□□□□□ -1.05
LSM5-201ENST00000223084 LAGE3Q14657 143 aa8.47□□□□□ -1.05
LSM5-201ENST00000223084 MPV17L2Q567V2 206 aa8.47□□□□□ -1.05
LSM5-201ENST00000223084 TMEM97Q5BJF2 176 aa8.47□□□□□ -1.05
LSM5-201ENST00000223084 KCNIP4Q6PIL6 250 aa8.47□□□□□ -1.05
LSM5-201ENST00000223084 ATRAIDQ6UW56 229 aa8.47□□□□□ -1.05
LSM5-201ENST00000223084 AMN1Q8IY45 258 aa8.47□□□□□ -1.05
LSM5-201ENST00000223084 IGHV1-24A0A0C4DH33 117 aa8.46□□□□□ -1.06
LSM5-201ENST00000223084 ADCYAP1P18509 176 aa8.46□□□□□ -1.06
LSM5-201ENST00000223084 RAB4AP20338 218 aa8.46□□□□□ -1.06
LSM5-201ENST00000223084 IQCJQ1A5X6 159 aa8.46□□□□□ -1.06
LSM5-201ENST00000223084 Q8N976 141 aa8.46□□□□□ -1.06
LSM5-201ENST00000223084 UBE2WQ96B02 151 aa8.46□□□□□ -1.06
LSM5-201ENST00000223084 CHCHD7Q9BUK0 85 aa8.46□□□□□ -1.06
LSM5-201ENST00000223084 TRAV8-3A0A0A6YYJ7 113 aa8.45□□□□□ -1.06
LSM5-201ENST00000223084 F8W036 122 aa8.45□□□□□ -1.06
LSM5-201ENST00000223084 SMKR1H3BMG3 65 aa8.45□□□□□ -1.06
LSM5-201ENST00000223084 CAMPP49913 170 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms