RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 IGKV1D-37A0A075B6S9 117 aa8.15□□□□□ -1.1
VPS18-201ENST00000220509 IGHV4-39P01824 125 aa8.15□□□□□ -1.1
VPS18-201ENST00000220509 CRYGDP07320 174 aa8.15□□□□□ -1.1
VPS18-201ENST00000220509 GP9P14770 177 aa8.15□□□□□ -1.1
VPS18-201ENST00000220509 MRPL35Q9NZE8 188 aaKnown RBP8.15□□□□□ -1.1
VPS18-201ENST00000220509 TRAV21A0A0B4J279 112 aa8.15□□□□□ -1.1
VPS18-201ENST00000220509 SPANXCQ9NY87 97 aa8.15□□□□□ -1.1
VPS18-201ENST00000220509 TMEM14CQ9P0S9 112 aa8.15□□□□□ -1.11
VPS18-201ENST00000220509 ZNF492Q9P255 531 aa8.15□□□□□ -1.11
VPS18-201ENST00000220509 C19orf71A6NCJ1 209 aa8.14□□□□□ -1.11
VPS18-201ENST00000220509 LINC01548A6NM66 108 aa8.14□□□□□ -1.11
VPS18-201ENST00000220509 FGF6P10767 208 aa8.14□□□□□ -1.11
VPS18-201ENST00000220509 CT83Q5H943 113 aa8.14□□□□□ -1.11
VPS18-201ENST00000220509 PRR25Q96S07 402 aa8.14□□□□□ -1.11
VPS18-201ENST00000220509 GFRA4Q9GZZ7 299 aa8.14□□□□□ -1.11
VPS18-201ENST00000220509 J3QQQ9 107 aa8.14□□□□□ -1.11
VPS18-201ENST00000220509 SMCPP49901 116 aaPredicted RBP8.14□□□□□ -1.11
VPS18-201ENST00000220509 MLST8Q9BVC4 326 aa8.14□□□□□ -1.11
VPS18-201ENST00000220509 BSNQ9UPA5 3926 aa8.14□□□□□ -1.11
VPS18-201ENST00000220509 IGHV4-30-2A0A087WSY4 118 aa8.14□□□□□ -1.11
VPS18-201ENST00000220509 A0A1W2PPR1 153 aa8.14□□□□□ -1.11
VPS18-201ENST00000220509 DPH3Q96FX2 82 aa8.14□□□□□ -1.11
VPS18-201ENST00000220509 HOXA3O43365 443 aaPredicted RBP8.13□□□□□ -1.11
VPS18-201ENST00000220509 IGHV4-38-2P0DP08 117 aa8.13□□□□□ -1.11
VPS18-201ENST00000220509 C9orf139Q6ZV77 190 aa8.13□□□□□ -1.11
VPS18-201ENST00000220509 Q8N9W7 124 aa8.13□□□□□ -1.11
VPS18-201ENST00000220509 GAS8-AS1O95177 125 aa8.13□□□□□ -1.11
VPS18-201ENST00000220509 IGLV11-55A0A075B6I3 123 aa8.13□□□□□ -1.11
VPS18-201ENST00000220509 SYNJ2BPP57105 145 aa8.13□□□□□ -1.11
VPS18-201ENST00000220509 BLCAPP62952 87 aa8.13□□□□□ -1.11
VPS18-201ENST00000220509 DYNAPQ8N1N2 210 aa8.13□□□□□ -1.11
VPS18-201ENST00000220509 SCGB3A1Q96QR1 104 aa8.13□□□□□ -1.11
VPS18-201ENST00000220509 TRAV12-3A0A0B4J271 114 aa8.12□□□□□ -1.11
VPS18-201ENST00000220509 CTSGP08311 255 aa8.12□□□□□ -1.11
VPS18-201ENST00000220509 PIP4P2Q8N4L2 257 aa8.12□□□□□ -1.11
VPS18-201ENST00000220509 LINC01549A6NIU2 74 aa8.12□□□□□ -1.11
VPS18-201ENST00000220509 OVOL1O14753 267 aa8.12□□□□□ -1.11
VPS18-201ENST00000220509 DSCR9P59020 149 aa8.12□□□□□ -1.11
VPS18-201ENST00000220509 C14orf178Q8N769 122 aaPredicted RBP8.12□□□□□ -1.11
VPS18-201ENST00000220509 LINC00526Q96FQ7 95 aa8.12□□□□□ -1.11
VPS18-201ENST00000220509 USMG5Q96IX5 58 aa8.12□□□□□ -1.11
VPS18-201ENST00000220509 NPBQ8NG41 125 aa8.12□□□□□ -1.11
VPS18-201ENST00000220509 FAM223BA6NKX1 122 aa8.11□□□□□ -1.11
VPS18-201ENST00000220509 FAM223AQ8IWN6 122 aa8.11□□□□□ -1.11
VPS18-201ENST00000220509 LINC01356Q8N9X3 169 aa8.11□□□□□ -1.11
VPS18-201ENST00000220509 NTN5Q8WTR8 489 aaPredicted RBP8.11□□□□□ -1.11
VPS18-201ENST00000220509 HIGD1BQ9P298 99 aa8.11□□□□□ -1.11
VPS18-201ENST00000220509 INS-IGF2F8WCM5 200 aa8.11□□□□□ -1.11
VPS18-201ENST00000220509 IGHG4P01861 327 aa8.11□□□□□ -1.11
VPS18-201ENST00000220509 FANCD2OSQ96PS1 177 aa8.11□□□□□ -1.11
VPS18-201ENST00000220509 DAZ1Q9NQZ3 744 aaKnown RBP8.11□□□□□ -1.11
VPS18-201ENST00000220509 ZNF815PA8K554 130 aa8.1□□□□□ -1.11
VPS18-201ENST00000220509 EGR2P11161 476 aaPredicted RBP8.1□□□□□ -1.11
VPS18-201ENST00000220509 F6UB75 175 aa8.1□□□□□ -1.11
VPS18-201ENST00000220509 HLA-DRB4P13762 266 aa8.1□□□□□ -1.11
VPS18-201ENST00000220509 SLC25A16P16260 332 aa8.1□□□□□ -1.11
VPS18-201ENST00000220509 TMEM170BQ5T4T1 132 aa8.1□□□□□ -1.11
VPS18-201ENST00000220509 Q5XG85 94 aa8.1□□□□□ -1.11
VPS18-201ENST00000220509 HLA-DRB4X5D2U9 266 aa8.1□□□□□ -1.11
VPS18-201ENST00000220509 NDUFC2O95298 119 aa8.1□□□□□ -1.11
VPS18-201ENST00000220509 IGHV4-59P01825 116 aa8.1□□□□□ -1.11
VPS18-201ENST00000220509 CRIP1P50238 77 aa8.1□□□□□ -1.11
VPS18-201ENST00000220509 Q96MF0 132 aa8.1□□□□□ -1.11
VPS18-201ENST00000220509 ZFP2Q6ZN57 461 aa8.09□□□□□ -1.11
VPS18-201ENST00000220509 RAI1Q7Z5J4 1906 aaPredicted RBP8.09□□□□□ -1.11
VPS18-201ENST00000220509 IGHV3-64A0A075B6Q5 118 aa8.09□□□□□ -1.11
VPS18-201ENST00000220509 A0A096LNJ9 63 aa8.09□□□□□ -1.11
VPS18-201ENST00000220509 MAPKAPK5-AS1Q8N8E1 139 aa8.09□□□□□ -1.11
VPS18-201ENST00000220509 PHLDA1Q8WV24 401 aaPredicted RBP8.09□□□□□ -1.11
VPS18-201ENST00000220509 C9orf85Q96MD7 179 aa8.09□□□□□ -1.11
VPS18-201ENST00000220509 HIST2H2BCQ6DN03 193 aa8.09□□□□□ -1.11
VPS18-201ENST00000220509 HIST2H2BDQ6DRA6 164 aa8.09□□□□□ -1.11
VPS18-201ENST00000220509 LY6G5BQ8NDX9 201 aa8.09□□□□□ -1.11
VPS18-201ENST00000220509 AGPAT4-IT1Q9H0P7 198 aa8.08□□□□□ -1.12
VPS18-201ENST00000220509 U3KQE9 123 aa8.08□□□□□ -1.12
VPS18-201ENST00000220509 LMO4P61968 165 aa8.08□□□□□ -1.12
VPS18-201ENST00000220509 DEFB112Q30KQ8 113 aa8.08□□□□□ -1.12
VPS18-201ENST00000220509 MORN3Q6PF18 240 aaPredicted RBP8.08□□□□□ -1.12
VPS18-201ENST00000220509 PEMTQ9UBM1 199 aa8.08□□□□□ -1.12
VPS18-201ENST00000220509 HHLA3Q9XRX5 114 aa8.08□□□□□ -1.12
VPS18-201ENST00000220509 CELSR1Q9NYQ6 3014 aa8.08□□□□□ -1.12
VPS18-201ENST00000220509 A0A087WWL8 130 aa8.08□□□□□ -1.12
VPS18-201ENST00000220509 SLC25A20O43772 301 aa8.08□□□□□ -1.12
VPS18-201ENST00000220509 FAM19A4Q96LR4 140 aa8.08□□□□□ -1.12
VPS18-201ENST00000220509 IGHV3-73A0A0B4J1V6 119 aa8.07□□□□□ -1.12
VPS18-201ENST00000220509 MYCNOSP40205 109 aa8.07□□□□□ -1.12
VPS18-201ENST00000220509 DEFB1P60022 68 aa8.07□□□□□ -1.12
VPS18-201ENST00000220509 TMEM258P61165 79 aa8.07□□□□□ -1.12
VPS18-201ENST00000220509 PRAC2D3DTV9 90 aa8.07□□□□□ -1.12
VPS18-201ENST00000220509 PRSS2P07478 247 aa8.07□□□□□ -1.12
VPS18-201ENST00000220509 CEMP1Q6PRD7 247 aaPredicted RBP8.07□□□□□ -1.12
VPS18-201ENST00000220509 KLHL30-AS1Q8NEE0 82 aa8.07□□□□□ -1.12
VPS18-201ENST00000220509 BUB3O43684 328 aa8.06□□□□□ -1.12
VPS18-201ENST00000220509 PMAIP1Q13794 54 aa8.06□□□□□ -1.12
VPS18-201ENST00000220509 MRPL55Q7Z7F7 128 aaKnown RBP8.06□□□□□ -1.12
VPS18-201ENST00000220509 BBC3Q96PG8 261 aaPredicted RBP8.06□□□□□ -1.12
VPS18-201ENST00000220509 TRAV12-2A0A075B6T6 113 aa8.06□□□□□ -1.12
VPS18-201ENST00000220509 COX7CP15954 63 aa8.06□□□□□ -1.12
VPS18-201ENST00000220509 SPINK13Q1W4C9 94 aa8.06□□□□□ -1.12
VPS18-201ENST00000220509 LINC01561Q8N1V8 128 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms