RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 PIFOQ8TCI5 191 aa9.29□□□□□ -0.92
TM9SF4-201ENST00000217315 AGRNO00468 2067 aa9.29□□□□□ -0.92
TM9SF4-201ENST00000217315 C11orf86A6NJI1 115 aa9.29□□□□□ -0.92
TM9SF4-201ENST00000217315 HIST2H2BDQ6DRA6 164 aa9.29□□□□□ -0.92
TM9SF4-201ENST00000217315 M0R2P5 195 aa9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 OPRPNQ99935 248 aaPredicted RBP9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 CHCHD5Q9BSY4 110 aa9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 HIGD1BQ9P298 99 aa9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 TRAV12-1A0A0B4J245 112 aa9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 A0A0J9YXV3 536 aa9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 FGF6P10767 208 aa9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 GAGE12JA6NER3 117 aa9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 GAGE4Q13068 117 aa9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 GAGE5Q13069 117 aa9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 GTSF1LQ9H1H1 148 aa9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 TRBV7-9A0A0J9YWB2 115 aa9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 RNASE3P12724 160 aaKnown RBP9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 AZU1P20160 251 aa9.28□□□□□ -0.92
TM9SF4-201ENST00000217315 CFAP47Q6ZTR5 3102 aa9.27□□□□□ -0.92
TM9SF4-201ENST00000217315 WDFY3Q8IZQ1 3526 aa9.27□□□□□ -0.92
TM9SF4-201ENST00000217315 K7EQG2 157 aa9.27□□□□□ -0.93
TM9SF4-201ENST00000217315 RHOHQ15669 191 aa9.27□□□□□ -0.93
TM9SF4-201ENST00000217315 COX8CQ7Z4L0 72 aa9.27□□□□□ -0.93
TM9SF4-201ENST00000217315 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.27□□□□□ -0.93
TM9SF4-201ENST00000217315 IGKV2-29A2NJV5 120 aaPredicted RBP9.27□□□□□ -0.93
TM9SF4-201ENST00000217315 IGLL5B9A064 214 aa9.27□□□□□ -0.93
TM9SF4-201ENST00000217315 PSMB8P28062 276 aa9.27□□□□□ -0.93
TM9SF4-201ENST00000217315 MAPKAPK5-AS1Q8N8E1 139 aa9.26□□□□□ -0.93
TM9SF4-201ENST00000217315 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.26□□□□□ -0.93
TM9SF4-201ENST00000217315 E9PLD3 99 aa9.26□□□□□ -0.93
TM9SF4-201ENST00000217315 CCL24O00175 119 aa9.26□□□□□ -0.93
TM9SF4-201ENST00000217315 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
TM9SF4-201ENST00000217315 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
TM9SF4-201ENST00000217315 TMEM89A2RUT3 159 aa9.25□□□□□ -0.93
TM9SF4-201ENST00000217315 IGLV1-40P01703 118 aa9.25□□□□□ -0.93
TM9SF4-201ENST00000217315 SIGMAR1Q99720 223 aa9.25□□□□□ -0.93
TM9SF4-201ENST00000217315 NDUFA12Q9UI09 145 aa9.25□□□□□ -0.93
TM9SF4-201ENST00000217315 GAGE7O76087 117 aa9.25□□□□□ -0.93
TM9SF4-201ENST00000217315 GAGE12FP0CL80 117 aa9.25□□□□□ -0.93
TM9SF4-201ENST00000217315 GAGE12GP0CL81 117 aa9.25□□□□□ -0.93
TM9SF4-201ENST00000217315 GAGE12IP0CL82 117 aa9.25□□□□□ -0.93
TM9SF4-201ENST00000217315 HTN3P15516 51 aa9.25□□□□□ -0.93
TM9SF4-201ENST00000217315 OR13C6PQ8NH95 151 aa9.25□□□□□ -0.93
TM9SF4-201ENST00000217315 P0DMU3 169 aa9.24□□□□□ -0.93
TM9SF4-201ENST00000217315 FAM231AP0DMU4 169 aa9.24□□□□□ -0.93
TM9SF4-201ENST00000217315 FAM231CP0DMU5 169 aa9.24□□□□□ -0.93
TM9SF4-201ENST00000217315 COPS9Q8WXC6 57 aa9.24□□□□□ -0.93
TM9SF4-201ENST00000217315 C9JAW5 83 aa9.24□□□□□ -0.93
TM9SF4-201ENST00000217315 IGHV4-31P0DP07 118 aa9.24□□□□□ -0.93
TM9SF4-201ENST00000217315 SH2D6Q7Z4S9 175 aa9.24□□□□□ -0.93
TM9SF4-201ENST00000217315 PRO1854Q9UHT4 67 aa9.24□□□□□ -0.93
TM9SF4-201ENST00000217315 TEX48A0A1B0GUV7 120 aa9.23□□□□□ -0.93
TM9SF4-201ENST00000217315 SPINK8P0C7L1 97 aa9.23□□□□□ -0.93
TM9SF4-201ENST00000217315 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
TM9SF4-201ENST00000217315 SPAG8Q99932 426 aaPredicted RBP9.23□□□□□ -0.93
TM9SF4-201ENST00000217315 ATMQ13315 3056 aa9.23□□□□□ -0.93
TM9SF4-201ENST00000217315 F8W1H4 67 aa9.23□□□□□ -0.93
TM9SF4-201ENST00000217315 PRIMA1Q86XR5 153 aa9.23□□□□□ -0.93
TM9SF4-201ENST00000217315 NEXN-AS1Q8NBZ9 246 aa9.23□□□□□ -0.93
TM9SF4-201ENST00000217315 TIMM17AQ99595 171 aa9.23□□□□□ -0.93
TM9SF4-201ENST00000217315 Q6YL49 198 aa9.23□□□□□ -0.93
TM9SF4-201ENST00000217315 IGHV4-4A0A075B6R2 117 aa9.22□□□□□ -0.93
TM9SF4-201ENST00000217315 WFDC2Q14508 124 aa9.22□□□□□ -0.93
TM9SF4-201ENST00000217315 CEMP1Q6PRD7 247 aaPredicted RBP9.22□□□□□ -0.93
TM9SF4-201ENST00000217315 C1QTNF4Q9BXJ3 329 aa9.22□□□□□ -0.93
TM9SF4-201ENST00000217315 CMC4P56277 68 aaPredicted RBP9.22□□□□□ -0.93
TM9SF4-201ENST00000217315 KLLNB2CW77 178 aa9.22□□□□□ -0.93
TM9SF4-201ENST00000217315 PRM2P04554 102 aa9.22□□□□□ -0.93
TM9SF4-201ENST00000217315 HHLA3Q9XRX5 114 aa9.22□□□□□ -0.93
TM9SF4-201ENST00000217315 KALRNO60229 2985 aa9.22□□□□□ -0.93
TM9SF4-201ENST00000217315 MORN3Q6PF18 240 aaPredicted RBP9.21□□□□□ -0.93
TM9SF4-201ENST00000217315 C20orf203Q8NBC4 194 aa9.21□□□□□ -0.93
TM9SF4-201ENST00000217315 NOP10Q9NPE3 64 aaKnown RBP9.21□□□□□ -0.93
TM9SF4-201ENST00000217315 TSSC4Q9Y5U2 329 aaPredicted RBP9.21□□□□□ -0.93
TM9SF4-201ENST00000217315 CRIP2P52943 208 aaPredicted RBP9.21□□□□□ -0.94
TM9SF4-201ENST00000217315 C18orf65Q6ZTR6 163 aa9.21□□□□□ -0.94
TM9SF4-201ENST00000217315 H3BMM0 161 aa9.2□□□□□ -0.94
TM9SF4-201ENST00000217315 SNCGO76070 127 aa9.2□□□□□ -0.94
TM9SF4-201ENST00000217315 C11orf68Q9H3H3 251 aaKnown RBP9.2□□□□□ -0.94
TM9SF4-201ENST00000217315 PSMG3-AS1Q96PY0 264 aa9.2□□□□□ -0.94
TM9SF4-201ENST00000217315 A4D1N5 150 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 LINC00158P58513 81 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 KRTAP10-9P60411 292 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 WFDC11Q8NEX6 87 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 TACC2O95359 2948 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 LGALS9O00182 355 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 DNAL4O96015 105 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 PROK1P58294 105 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 MAP6D1Q9H9H5 199 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 M0QY20 66 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 HIST2H2BCQ6DN03 193 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 TM2D2Q9BX73 214 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 ZNF702PQ9H963 129 aa9.19□□□□□ -0.94
TM9SF4-201ENST00000217315 TRBV20-1A0A075B6N2 111 aa9.18□□□□□ -0.94
TM9SF4-201ENST00000217315 ODF3Q96PU9 254 aa9.18□□□□□ -0.94
TM9SF4-201ENST00000217315 SOCS3O14543 225 aa9.18□□□□□ -0.94
TM9SF4-201ENST00000217315 LEPROTO15243 131 aa9.18□□□□□ -0.94
TM9SF4-201ENST00000217315 CITED2Q99967 270 aaPredicted RBP9.18□□□□□ -0.94
TM9SF4-201ENST00000217315 TRAV8-3A0A0A6YYJ7 113 aa9.18□□□□□ -0.94
TM9SF4-201ENST00000217315 C4orf3Q8WVX3 66 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms