RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 LOC730098B7Z3J9 87 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 F8VRH5 84 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 H3BQF6 201 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 BRI3O95415 125 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 SIX6O95475 246 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 GYPAP02724 150 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 UQCRHP07919 91 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 SAA2P0DJI9 122 aaPredicted RBP0.28□□□□□ -2.36
CDKN3-201ENST00000216414 UBE2D1P51668 147 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 KRTAP10-4P60372 401 aaPredicted RBP0.28□□□□□ -2.36
CDKN3-201ENST00000216414 BTG2P78543 158 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 RBM3P98179 157 aaKnown RBP0.28□□□□□ -2.36
CDKN3-201ENST00000216414 FXYD3Q14802 87 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 HMGN3Q15651 99 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 TPRXLQ17RH7 258 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 COL5A1-AS1Q5SY13 56 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 CFAP126Q5VTH2 177 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 Q6ZRN7 208 aaPredicted RBP0.28□□□□□ -2.36
CDKN3-201ENST00000216414 COMMD6Q7Z4G1 85 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 SBSPONQ8IVN8 264 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 Q8N8P6 123 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 C15orf53Q8NAA6 179 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 PP6455Q8WZ26 134 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 CGREF1Q99674 301 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 AGPAT4-IT1Q9H0P7 198 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 PRO1854Q9UHT4 67 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 LINC00312Q9Y6C7 94 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 SIP14410 1827 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 NUP210LQ5VU65 1888 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 HELZP42694 1942 aaKnown RBP0.28□□□□□ -2.36
CDKN3-201ENST00000216414 CEP192Q8TEP8 1941 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 EML5Q05BV3 1969 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 EXPH5Q8NEV8 1989 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 TANC2Q9HCD6 1990 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 ABCC5O15440 1437 aa0.28□□□□□ -2.37
CDKN3-201ENST00000216414 BLMP54132 1417 aaPredicted RBP0.28□□□□□ -2.37
CDKN3-201ENST00000216414 PPIP5K1Q6PFW1 1433 aa0.28□□□□□ -2.37
CDKN3-201ENST00000216414 NSD3Q9BZ95 1437 aa0.28□□□□□ -2.37
CDKN3-201ENST00000216414 POLA1P09884 1462 aaPredicted RBP0.28□□□□□ -2.37
CDKN3-201ENST00000216414 CFTRP13569 1480 aa0.28□□□□□ -2.37
CDKN3-201ENST00000216414 IQSEC2Q5JU85 1478 aa0.28□□□□□ -2.37
CDKN3-201ENST00000216414 IFT140Q96RY7 1462 aa0.28□□□□□ -2.37
CDKN3-201ENST00000216414 ZGRF1Q86YA3 2104 aa0.28□□□□□ -2.37
CDKN3-201ENST00000216414 FAM135AQ9P2D6 1515 aa0.28□□□□□ -2.37
CDKN3-201ENST00000216414 LAMC3Q9Y6N6 1575 aa0.28□□□□□ -2.37
CDKN3-201ENST00000216414 LRRC37A3O60309 1634 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 COL4A1P02462 1669 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 SHANK3Q9BYB0 1731 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 STRCQ7RTU9 1775 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 N4BP2Q86UW6 1770 aaPredicted RBP0.27□□□□□ -2.37
CDKN3-201ENST00000216414 SPEF2Q9C093 1822 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 ANKRD31Q8N7Z5 1873 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 MYH3P11055 1940 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 MYH1P12882 1939 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 MYH8P13535 1937 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 DLG5Q8TDM6 1919 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 MCM3APO60318 1980 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 TNRC6AQ8NDV7 1962 aaKnown RBP0.27□□□□□ -2.37
CDKN3-201ENST00000216414 TRAV1-2A0A0B4J238 106 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 TRBV6-1A0A0K0K1D8 114 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 CHKB-CPT1BH3BT56 60 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 I3L3M4 83 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 M0R135 149 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 M0R3E3 92 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 CORTO00230 105 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 ATOX1O00244 68 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 GNG7O60262 68 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 NDUFB1O75438 58 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 SFT2D2O95562 160 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 MPC2O95563 127 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 S100A8P05109 93 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 LINC00694P0DN24 101 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 CCL3L1P16619 93 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 HMGA1P17096 107 aaKnown RBP0.27□□□□□ -2.37
CDKN3-201ENST00000216414 RPL37P61927 97 aaKnown RBP0.27□□□□□ -2.37
CDKN3-201ENST00000216414 SEC11AP67812 179 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 SPRNQ5BIV9 151 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 Q5BKY6 102 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 NMSQ5H8A3 153 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 NCMAPQ5T1S8 102 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 Q6AWC8 147 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 CSAG1Q6PB30 78 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 Q6ZRX8 168 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 ZCCHC23Q6ZST2 131 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 C5orf38Q86SI9 138 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 ACBD7Q8N6N7 88 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 C5orf56Q8N8D9 126 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 SPACA4Q8TDM5 124 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 LINC00208Q96KT6 92 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 CNFNQ9BYD5 112 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 C10orf95Q9H7T3 257 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 NXT2Q9NPJ8 142 aaKnown RBP0.27□□□□□ -2.37
CDKN3-201ENST00000216414 NDUFA4L2Q9NRX3 87 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 PLAC8Q9NZF1 115 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 CRIPTQ9P021 101 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 PRO0255Q9UI72 69 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 IER3IP1Q9Y5U9 82 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 ARL2-SNX15V9GYD0 113 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 ARHGAP31Q2M1Z3 1444 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 FAM135BQ49AJ0 1406 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms