RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 PLA2G2CQ5R387 149 aa13.08□□□□□ -0.31
ITGB4-201ENST00000200181 DOCK8Q8NF50 2099 aa13.08□□□□□ -0.32
ITGB4-201ENST00000200181 C14orf177Q52M58 125 aa13.08□□□□□ -0.32
ITGB4-201ENST00000200181 A0A0J9YX75 114 aa13.08□□□□□ -0.32
ITGB4-201ENST00000200181 TMEM89A2RUT3 159 aa13.08□□□□□ -0.32
ITGB4-201ENST00000200181 COL4A6Q14031 1691 aa13.08□□□□□ -0.32
ITGB4-201ENST00000200181 LOXL1Q08397 574 aaPredicted RBP13.07□□□□□ -0.32
ITGB4-201ENST00000200181 C10orf105Q8TEF2 133 aa13.07□□□□□ -0.32
ITGB4-201ENST00000200181 NACAE9PAV3 2078 aa13.07□□□□□ -0.32
ITGB4-201ENST00000200181 USF3Q68DE3 2245 aa13.07□□□□□ -0.32
ITGB4-201ENST00000200181 SPTBN2O15020 2390 aa13.07□□□□□ -0.32
ITGB4-201ENST00000200181 A0A096LNI7 61 aa13.06□□□□□ -0.32
ITGB4-201ENST00000200181 SPANXB1Q9NS25 103 aaPredicted RBP13.06□□□□□ -0.32
ITGB4-201ENST00000200181 SMAD5-AS1Q9Y6J3 95 aa13.06□□□□□ -0.32
ITGB4-201ENST00000200181 TCF20Q9UGU0 1960 aaKnown RBP13.06□□□□□ -0.32
ITGB4-201ENST00000200181 FAM19A1Q7Z5A9 133 aa13.06□□□□□ -0.32
ITGB4-201ENST00000200181 LINC00269Q8N2A0 174 aa13.06□□□□□ -0.32
ITGB4-201ENST00000200181 CHD3Q12873 2000 aaKnown RBP13.05□□□□□ -0.32
ITGB4-201ENST00000200181 SLPIP03973 132 aa13.05□□□□□ -0.32
ITGB4-201ENST00000200181 REG3AQ06141 175 aa13.05□□□□□ -0.32
ITGB4-201ENST00000200181 WFDC10BQ8IUB3 73 aa13.05□□□□□ -0.32
ITGB4-201ENST00000200181 P0DMU3 169 aa13.05□□□□□ -0.32
ITGB4-201ENST00000200181 FAM231AP0DMU4 169 aa13.05□□□□□ -0.32
ITGB4-201ENST00000200181 FAM231CP0DMU5 169 aa13.05□□□□□ -0.32
ITGB4-201ENST00000200181 TNRC6AQ8NDV7 1962 aaKnown RBP13.05□□□□□ -0.32
ITGB4-201ENST00000200181 GVINP1Q7Z2Y8 2422 aa13.05□□□□□ -0.32
ITGB4-201ENST00000200181 BRWD3Q6RI45 1802 aa13.04□□□□□ -0.32
ITGB4-201ENST00000200181 UNQ9165/PRO28630Q6UXU0 137 aa13.04□□□□□ -0.32
ITGB4-201ENST00000200181 MAP6D1Q9H9H5 199 aa13.04□□□□□ -0.32
ITGB4-201ENST00000200181 E7EUB6 86 aa13.04□□□□□ -0.32
ITGB4-201ENST00000200181 WT1P19544 449 aaPredicted RBP13.04□□□□□ -0.32
ITGB4-201ENST00000200181 KIR2DL5BQ8NHK3 375 aa13.04□□□□□ -0.32
ITGB4-201ENST00000200181 PLXNA4Q9HCM2 1894 aa13.04□□□□□ -0.32
ITGB4-201ENST00000200181 Q6ZSR3 168 aa13.03□□□□□ -0.32
ITGB4-201ENST00000200181 PIK3CD-AS1Q5SR53 167 aa13.03□□□□□ -0.32
ITGB4-201ENST00000200181 ODF3L1Q8IXM7 274 aa13.03□□□□□ -0.32
ITGB4-201ENST00000200181 Q8N7P7 452 aa13.03□□□□□ -0.32
ITGB4-201ENST00000200181 A0A1B0GXF2 115 aa13.02□□□□□ -0.32
ITGB4-201ENST00000200181 SIP14410 1827 aa13.02□□□□□ -0.33
ITGB4-201ENST00000200181 TP53TG3Q9ULZ0 132 aa13.01□□□□□ -0.33
ITGB4-201ENST00000200181 COL6A6A6NMZ7 2263 aa13.01□□□□□ -0.33
ITGB4-201ENST00000200181 PKDREJQ9NTG1 2253 aa13.01□□□□□ -0.33
ITGB4-201ENST00000200181 TP73-AS1Q9UF72 201 aa13.01□□□□□ -0.33
ITGB4-201ENST00000200181 ZFP36P26651 326 aaKnown RBP13.01□□□□□ -0.33
ITGB4-201ENST00000200181 CHCHD10Q8WYQ3 142 aaPredicted RBP13.01□□□□□ -0.33
ITGB4-201ENST00000200181 IGLV2-14P01704 120 aa13.01□□□□□ -0.33
ITGB4-201ENST00000200181 ATP5EP56381 51 aaPredicted RBP13.01□□□□□ -0.33
ITGB4-201ENST00000200181 SBF1O95248 1867 aa13□□□□□ -0.33
ITGB4-201ENST00000200181 A0A0J9YWU9 116 aa13□□□□□ -0.33
ITGB4-201ENST00000200181 IGLV1-47P01700 117 aa13□□□□□ -0.33
ITGB4-201ENST00000200181 ROS1P08922 2347 aa13□□□□□ -0.33
ITGB4-201ENST00000200181 ZNF80P51504 273 aaPredicted RBP13□□□□□ -0.33
ITGB4-201ENST00000200181 ZSWIM8A7E2V4 1837 aa13□□□□□ -0.33
ITGB4-201ENST00000200181 NEXN-AS1Q8NBZ9 246 aa13□□□□□ -0.33
ITGB4-201ENST00000200181 LINC00467Q9BRT7 94 aa13□□□□□ -0.33
ITGB4-201ENST00000200181 TMEM223A0PJW6 202 aa12.99□□□□□ -0.33
ITGB4-201ENST00000200181 TICRRQ7Z2Z1 1910 aa12.99□□□□□ -0.33
ITGB4-201ENST00000200181 PIP4P1Q86T03 277 aa12.99□□□□□ -0.33
ITGB4-201ENST00000200181 VWA8A3KMH1 1905 aa12.99□□□□□ -0.33
ITGB4-201ENST00000200181 A0A087WZ39 114 aa12.99□□□□□ -0.33
ITGB4-201ENST00000200181 LRCOL1A6NCL2 159 aa12.99□□□□□ -0.33
ITGB4-201ENST00000200181 C11orf45Q8TAV5 145 aa12.99□□□□□ -0.33
ITGB4-201ENST00000200181 SNURFQ9Y675 71 aa12.99□□□□□ -0.33
ITGB4-201ENST00000200181 INSL3P51460 131 aa12.98□□□□□ -0.33
ITGB4-201ENST00000200181 Q6ZTI0 123 aa12.98□□□□□ -0.33
ITGB4-201ENST00000200181 IGKV1D-37A0A075B6S9 117 aa12.98□□□□□ -0.33
ITGB4-201ENST00000200181 DYSFO75923 2080 aa12.98□□□□□ -0.33
ITGB4-201ENST00000200181 NCKAP5O14513 1909 aa12.98□□□□□ -0.33
ITGB4-201ENST00000200181 WDR81Q562E7 1941 aa12.98□□□□□ -0.33
ITGB4-201ENST00000200181 IGFL2Q6UWQ7 119 aa12.98□□□□□ -0.33
ITGB4-201ENST00000200181 CACNA1BQ00975 2339 aa12.98□□□□□ -0.33
ITGB4-201ENST00000200181 NRGNQ92686 78 aa12.98□□□□□ -0.33
ITGB4-201ENST00000200181 H7C423 109 aa12.97□□□□□ -0.33
ITGB4-201ENST00000200181 LINC00308Q8TCZ7 52 aa12.97□□□□□ -0.33
ITGB4-201ENST00000200181 TRIAP1O43715 76 aa12.97□□□□□ -0.33
ITGB4-201ENST00000200181 CDKN2A-AS1Q9UH64 79 aa12.97□□□□□ -0.33
ITGB4-201ENST00000200181 WNK2Q9Y3S1 2297 aa12.97□□□□□ -0.33
ITGB4-201ENST00000200181 A6NED7 52 aa12.96□□□□□ -0.33
ITGB4-201ENST00000200181 NDUFC1O43677 76 aa12.96□□□□□ -0.33
ITGB4-201ENST00000200181 IBA57-AS1B1ANH7 110 aa12.96□□□□□ -0.33
ITGB4-201ENST00000200181 ZNF407Q9C0G0 2248 aa12.96□□□□□ -0.34
ITGB4-201ENST00000200181 ZNF22P17026 224 aaPredicted RBP12.96□□□□□ -0.34
ITGB4-201ENST00000200181 NDUFA7O95182 113 aa12.95□□□□□ -0.34
ITGB4-201ENST00000200181 A6NDX4 124 aa12.95□□□□□ -0.34
ITGB4-201ENST00000200181 CRYGDP07320 174 aa12.95□□□□□ -0.34
ITGB4-201ENST00000200181 ODF3Q96PU9 254 aa12.95□□□□□ -0.34
ITGB4-201ENST00000200181 SPRY4Q9C004 299 aa12.95□□□□□ -0.34
ITGB4-201ENST00000200181 HELZP42694 1942 aaKnown RBP12.95□□□□□ -0.34
ITGB4-201ENST00000200181 CCKP06307 115 aa12.95□□□□□ -0.34
ITGB4-201ENST00000200181 LINC00322Q6ZN03 302 aaPredicted RBP12.95□□□□□ -0.34
ITGB4-201ENST00000200181 GDF5OSQ5U4N7 250 aa12.95□□□□□ -0.34
ITGB4-201ENST00000200181 TRBV30A0A0K0K1B3 111 aa12.95□□□□□ -0.34
ITGB4-201ENST00000200181 C1orf158Q8N1D5 194 aa12.95□□□□□ -0.34
ITGB4-201ENST00000200181 IL17DQ8TAD2 202 aa12.95□□□□□ -0.34
ITGB4-201ENST00000200181 ADORA2A-AS1P86434 159 aa12.94□□□□□ -0.34
ITGB4-201ENST00000200181 IGLV2-8P01709 118 aa12.94□□□□□ -0.34
ITGB4-201ENST00000200181 FAM19A5Q7Z5A7 132 aaPredicted RBP12.94□□□□□ -0.34
ITGB4-201ENST00000200181 CCDC140Q96MF4 163 aa12.94□□□□□ -0.34
ITGB4-201ENST00000200181 KIAA1671Q9BY89 1806 aa12.93□□□□□ -0.34
ITGB4-201ENST00000200181 IGLV4-3A0A075B6K6 122 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms