RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 TIMM17AQ99595 171 aa11.33□□□□□ -0.6
PDZD4-201ENST00000164640 CENPVL3A0A0U1RRI6 287 aa11.32□□□□□ -0.6
PDZD4-201ENST00000164640 H7C423 109 aa11.32□□□□□ -0.6
PDZD4-201ENST00000164640 DGAT2L7PQ6IED9 249 aa11.32□□□□□ -0.6
PDZD4-201ENST00000164640 BDP1A6H8Y1 2624 aa11.32□□□□□ -0.6
PDZD4-201ENST00000164640 IGHV3-30-3P0DP02 117 aa11.32□□□□□ -0.6
PDZD4-201ENST00000164640 SAA4P35542 130 aa11.32□□□□□ -0.6
PDZD4-201ENST00000164640 P0DMU3 169 aa11.31□□□□□ -0.6
PDZD4-201ENST00000164640 FAM231AP0DMU4 169 aa11.31□□□□□ -0.6
PDZD4-201ENST00000164640 FAM231CP0DMU5 169 aa11.31□□□□□ -0.6
PDZD4-201ENST00000164640 MRPL53Q96EL3 112 aaKnown RBP11.31□□□□□ -0.6
PDZD4-201ENST00000164640 M0R1W7 72 aa11.31□□□□□ -0.6
PDZD4-201ENST00000164640 RHPN1-AS1Q9BWJ2 59 aa11.31□□□□□ -0.6
PDZD4-201ENST00000164640 PRRC2AP48634 2157 aaKnown RBP11.31□□□□□ -0.6
PDZD4-201ENST00000164640 TRAV41A0A0B4J266 112 aa11.3□□□□□ -0.6
PDZD4-201ENST00000164640 TMEM223A0PJW6 202 aa11.3□□□□□ -0.6
PDZD4-201ENST00000164640 KNCNA6PVL3 124 aa11.3□□□□□ -0.6
PDZD4-201ENST00000164640 OTOGLQ3ZCN5 2332 aa11.3□□□□□ -0.6
PDZD4-201ENST00000164640 OOSP1A8MZH6 123 aa11.29□□□□□ -0.6
PDZD4-201ENST00000164640 M0QXV9 152 aa11.29□□□□□ -0.6
PDZD4-201ENST00000164640 PLA2G2CQ5R387 149 aa11.29□□□□□ -0.6
PDZD4-201ENST00000164640 LENEPQ9Y5L5 61 aa11.29□□□□□ -0.6
PDZD4-201ENST00000164640 POLR2KP53803 58 aaKnown RBP11.29□□□□□ -0.6
PDZD4-201ENST00000164640 MDFICQ9P1T7 246 aa11.29□□□□□ -0.6
PDZD4-201ENST00000164640 SVEP1Q4LDE5 3571 aa11.28□□□□□ -0.6
PDZD4-201ENST00000164640 GAGE2AQ6NT46 116 aa11.28□□□□□ -0.6
PDZD4-201ENST00000164640 LINC00694P0DN24 101 aa11.28□□□□□ -0.6
PDZD4-201ENST00000164640 MINOS1Q5TGZ0 78 aa11.28□□□□□ -0.6
PDZD4-201ENST00000164640 CSPG4Q6UVK1 2322 aa11.28□□□□□ -0.6
PDZD4-201ENST00000164640 TRBV30A0A0K0K1B3 111 aa11.28□□□□□ -0.6
PDZD4-201ENST00000164640 TNFRSF18Q9Y5U5 241 aa11.28□□□□□ -0.6
PDZD4-201ENST00000164640 I3L3M4 83 aa11.27□□□□□ -0.6
PDZD4-201ENST00000164640 EIF4EBP3O60516 100 aaPredicted RBP11.27□□□□□ -0.6
PDZD4-201ENST00000164640 CIRBPQ14011 172 aaKnown RBP11.27□□□□□ -0.6
PDZD4-201ENST00000164640 KLK5Q9Y337 293 aaPredicted RBP11.27□□□□□ -0.6
PDZD4-201ENST00000164640 LOC107984640A0A0U1RRK4 108 aa11.27□□□□□ -0.61
PDZD4-201ENST00000164640 RNF223E7ERA6 249 aa11.27□□□□□ -0.61
PDZD4-201ENST00000164640 CCL21O00585 134 aa11.27□□□□□ -0.61
PDZD4-201ENST00000164640 SPINK13Q1W4C9 94 aa11.27□□□□□ -0.61
PDZD4-201ENST00000164640 Q6Q795 121 aa11.27□□□□□ -0.61
PDZD4-201ENST00000164640 MINOS1-NBL1R4GNA1 71 aa11.27□□□□□ -0.61
PDZD4-201ENST00000164640 H3BT86 120 aa11.26□□□□□ -0.61
PDZD4-201ENST00000164640 ZFP36P26651 326 aaKnown RBP11.26□□□□□ -0.61
PDZD4-201ENST00000164640 BRD3OSQ6XYD6 125 aa11.26□□□□□ -0.61
PDZD4-201ENST00000164640 LY6G5BQ8NDX9 201 aa11.26□□□□□ -0.61
PDZD4-201ENST00000164640 TMEM126AQ9H061 195 aa11.26□□□□□ -0.61
PDZD4-201ENST00000164640 CEP295Q9C0D2 2601 aa11.26□□□□□ -0.61
PDZD4-201ENST00000164640 ATRXP46100 2492 aa11.26□□□□□ -0.61
PDZD4-201ENST00000164640 ODF3BA8MYP8 253 aa11.26□□□□□ -0.61
PDZD4-201ENST00000164640 ADAMTSL4-AS1Q5T5F5 129 aa11.26□□□□□ -0.61
PDZD4-201ENST00000164640 IGFL3Q6UXB1 125 aa11.26□□□□□ -0.61
PDZD4-201ENST00000164640 VPREB3Q9UKI3 123 aa11.26□□□□□ -0.61
PDZD4-201ENST00000164640 IGHV3-38A0A0C4DH36 116 aa11.25□□□□□ -0.61
PDZD4-201ENST00000164640 SPANXA1Q9NS26 97 aa11.25□□□□□ -0.61
PDZD4-201ENST00000164640 C20orf203Q8NBC4 194 aa11.24□□□□□ -0.61
PDZD4-201ENST00000164640 MAP1AP78559 2803 aaPredicted RBP11.24□□□□□ -0.61
PDZD4-201ENST00000164640 ASH1LQ9NR48 2969 aaKnown RBP11.24□□□□□ -0.61
PDZD4-201ENST00000164640 AMELXQ99217 191 aa11.24□□□□□ -0.61
PDZD4-201ENST00000164640 MUC4Q99102 2169 aa11.24□□□□□ -0.61
PDZD4-201ENST00000164640 IGLV4-3A0A075B6K6 122 aa11.23□□□□□ -0.61
PDZD4-201ENST00000164640 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.23□□□□□ -0.61
PDZD4-201ENST00000164640 IGKV2-29A2NJV5 120 aaPredicted RBP11.23□□□□□ -0.61
PDZD4-201ENST00000164640 TRAV13-1A0A0B4J241 112 aa11.23□□□□□ -0.61
PDZD4-201ENST00000164640 IGHV4OR15-8A0A075B7B6 117 aa11.22□□□□□ -0.61
PDZD4-201ENST00000164640 A0A087WW49 117 aa11.22□□□□□ -0.61
PDZD4-201ENST00000164640 TRBV27A0A0K0K1C4 114 aa11.22□□□□□ -0.61
PDZD4-201ENST00000164640 HOXD3P31249 432 aaPredicted RBP11.22□□□□□ -0.61
PDZD4-201ENST00000164640 HERVK_113P63121 156 aa11.22□□□□□ -0.61
PDZD4-201ENST00000164640 Q8N6K4 173 aa11.22□□□□□ -0.61
PDZD4-201ENST00000164640 ITLN2Q8WWU7 325 aaPredicted RBP11.22□□□□□ -0.61
PDZD4-201ENST00000164640 NPFFO15130 113 aa11.21□□□□□ -0.61
PDZD4-201ENST00000164640 RHOHQ15669 191 aa11.21□□□□□ -0.61
PDZD4-201ENST00000164640 M0QY20 66 aa11.2□□□□□ -0.62
PDZD4-201ENST00000164640 SYNJ2BPP57105 145 aa11.2□□□□□ -0.62
PDZD4-201ENST00000164640 LINC00315P59091 139 aa11.2□□□□□ -0.62
PDZD4-201ENST00000164640 LST1O00453 97 aa11.2□□□□□ -0.62
PDZD4-201ENST00000164640 IGHV1-69P01742 117 aa11.2□□□□□ -0.62
PDZD4-201ENST00000164640 BAALC-AS2P0C853 105 aa11.2□□□□□ -0.62
PDZD4-201ENST00000164640 EDN2P20800 178 aa11.2□□□□□ -0.62
PDZD4-201ENST00000164640 ATP5J2P56134 94 aa11.2□□□□□ -0.62
PDZD4-201ENST00000164640 PROK1P58294 105 aa11.2□□□□□ -0.62
PDZD4-201ENST00000164640 MIAQ16674 131 aa11.2□□□□□ -0.62
PDZD4-201ENST00000164640 BRI3O95415 125 aa11.19□□□□□ -0.62
PDZD4-201ENST00000164640 MED14OSP0DP75 135 aa11.19□□□□□ -0.62
PDZD4-201ENST00000164640 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
PDZD4-201ENST00000164640 NXPH4O95158 308 aa11.19□□□□□ -0.62
PDZD4-201ENST00000164640 KIF25-AS1Q9Y6Z4 181 aa11.19□□□□□ -0.62
PDZD4-201ENST00000164640 IGHV3-16A0A0C4DH30 117 aa11.19□□□□□ -0.62
PDZD4-201ENST00000164640 NDUFA4O00483 81 aa11.19□□□□□ -0.62
PDZD4-201ENST00000164640 NDUFA7O95182 113 aa11.18□□□□□ -0.62
PDZD4-201ENST00000164640 DNAL4O96015 105 aa11.18□□□□□ -0.62
PDZD4-201ENST00000164640 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
PDZD4-201ENST00000164640 Q9HAA7 133 aa11.18□□□□□ -0.62
PDZD4-201ENST00000164640 IGKV3OR2-268A0A0C4DH90 116 aa11.18□□□□□ -0.62
PDZD4-201ENST00000164640 DAZ2Q13117 558 aaKnown RBP11.18□□□□□ -0.62
PDZD4-201ENST00000164640 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
PDZD4-201ENST00000164640 C3orf22Q8N5N4 141 aa11.18□□□□□ -0.62
PDZD4-201ENST00000164640 DAZ1Q9NQZ3 744 aaKnown RBP11.18□□□□□ -0.62
PDZD4-201ENST00000164640 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
PDZD4-201ENST00000164640 PTPRQQ9UMZ3 2332 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms