RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PIK3CD-AS1Q5SR53 167 aa6.06□□□□□ -1.44
VAMP3-201ENST00000054666 CLUHP3Q96NS8 147 aa6.06□□□□□ -1.44
VAMP3-201ENST00000054666 CHAC1Q9BUX1 264 aa6.06□□□□□ -1.44
VAMP3-201ENST00000054666 I3L3M4 83 aa6.06□□□□□ -1.44
VAMP3-201ENST00000054666 RHODO00212 210 aa6.06□□□□□ -1.44
VAMP3-201ENST00000054666 HERVK_113P61574 105 aa6.06□□□□□ -1.44
VAMP3-201ENST00000054666 ODF3L2Q3SX64 289 aa6.06□□□□□ -1.44
VAMP3-201ENST00000054666 LINC00467Q9BRT7 94 aa6.06□□□□□ -1.44
VAMP3-201ENST00000054666 EDA2RQ9HAV5 297 aa6.06□□□□□ -1.44
VAMP3-201ENST00000054666 TRBV25-1A0A075B6N4 114 aa6.05□□□□□ -1.44
VAMP3-201ENST00000054666 HILS1P60008 231 aa6.05□□□□□ -1.44
VAMP3-201ENST00000054666 RPL39P62891 51 aaKnown RBP6.05□□□□□ -1.44
VAMP3-201ENST00000054666 PMVKQ15126 192 aa6.05□□□□□ -1.44
VAMP3-201ENST00000054666 MORN3Q6PF18 240 aaPredicted RBP6.05□□□□□ -1.44
VAMP3-201ENST00000054666 SPXQ9BT56 116 aa6.05□□□□□ -1.44
VAMP3-201ENST00000054666 TTTY13Q9BZ97 58 aa6.05□□□□□ -1.44
VAMP3-201ENST00000054666 AKAP9Q99996 3911 aa6.05□□□□□ -1.44
VAMP3-201ENST00000054666 IGIPA6NJ69 53 aa6.05□□□□□ -1.44
VAMP3-201ENST00000054666 SAP30O75446 220 aa6.05□□□□□ -1.44
VAMP3-201ENST00000054666 GCSHP23434 173 aa6.05□□□□□ -1.44
VAMP3-201ENST00000054666 CMC4P56277 68 aaPredicted RBP6.05□□□□□ -1.44
VAMP3-201ENST00000054666 UBE2V1Q13404 147 aa6.05□□□□□ -1.44
VAMP3-201ENST00000054666 DEFB104AQ8WTQ1 72 aa6.05□□□□□ -1.44
VAMP3-201ENST00000054666 PTH2Q96A98 100 aa6.05□□□□□ -1.44
VAMP3-201ENST00000054666 IGHV3-73A0A0B4J1V6 119 aa6.04□□□□□ -1.44
VAMP3-201ENST00000054666 XCL2Q9UBD3 114 aa6.04□□□□□ -1.44
VAMP3-201ENST00000054666 TNFRSF18Q9Y5U5 241 aa6.04□□□□□ -1.44
VAMP3-201ENST00000054666 ANK3Q12955 4377 aaKnown RBP6.04□□□□□ -1.44
VAMP3-201ENST00000054666 E9PLD3 99 aa6.03□□□□□ -1.44
VAMP3-201ENST00000054666 H3BRM9 83 aa6.03□□□□□ -1.44
VAMP3-201ENST00000054666 NDUFA7O95182 113 aa6.03□□□□□ -1.44
VAMP3-201ENST00000054666 TSHBP01222 138 aa6.03□□□□□ -1.44
VAMP3-201ENST00000054666 OR4C5Q8NGB2 326 aa6.03□□□□□ -1.44
VAMP3-201ENST00000054666 IGHV3OR16-12A0A075B7B8 117 aa6.03□□□□□ -1.44
VAMP3-201ENST00000054666 MYMXA0A1B0GTQ4 84 aa6.03□□□□□ -1.44
VAMP3-201ENST00000054666 C11orf72Q8NBR9 251 aa6.03□□□□□ -1.44
VAMP3-201ENST00000054666 PRADC1Q9BSG0 188 aa6.03□□□□□ -1.44
VAMP3-201ENST00000054666 MRPL16Q9NX20 251 aaKnown RBP6.03□□□□□ -1.44
VAMP3-201ENST00000054666 WNK1Q9H4A3 2382 aa6.03□□□□□ -1.44
VAMP3-201ENST00000054666 C11orf86A6NJI1 115 aa6.02□□□□□ -1.45
VAMP3-201ENST00000054666 TAL2Q16559 108 aa6.02□□□□□ -1.45
VAMP3-201ENST00000054666 CFAP126Q5VTH2 177 aa6.02□□□□□ -1.45
VAMP3-201ENST00000054666 C20orf203Q8NBC4 194 aa6.02□□□□□ -1.45
VAMP3-201ENST00000054666 CST9LQ9H4G1 147 aa6.02□□□□□ -1.45
VAMP3-201ENST00000054666 CHD6Q8TD26 2715 aa6.02□□□□□ -1.45
VAMP3-201ENST00000054666 IGLV4-69A0A075B6H9 119 aa6.02□□□□□ -1.45
VAMP3-201ENST00000054666 C9orf118A6NHY6 69 aa6.02□□□□□ -1.45
VAMP3-201ENST00000054666 CCL25O15444 150 aa6.02□□□□□ -1.45
VAMP3-201ENST00000054666 PRM2P04554 102 aa6.02□□□□□ -1.45
VAMP3-201ENST00000054666 CEND1Q8N111 149 aa6.02□□□□□ -1.45
VAMP3-201ENST00000054666 TENM4Q6N022 2769 aa6.02□□□□□ -1.45
VAMP3-201ENST00000054666 ZNF815PA8K554 130 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 SMIM13P0DJ93 91 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 FXYD2P54710 66 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 EMP1P54849 157 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 TMEM170BQ5T4T1 132 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 UFSP1Q6NVU6 142 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 MAPKAPK5-AS1Q8N8E1 139 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 HIST1H4GQ99525 98 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 KMT2BQ9UMN6 2715 aaPredicted RBP6.01□□□□□ -1.45
VAMP3-201ENST00000054666 P0DMU3 169 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 FAM231AP0DMU4 169 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 FAM231CP0DMU5 169 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 BEAN1Q3B7T3 259 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 AMMECR1LQ6DCA0 310 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 SCGB1D4Q6XE38 83 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 RAB37Q96AX2 223 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 DNAJC30Q96LL9 226 aa6.01□□□□□ -1.45
VAMP3-201ENST00000054666 ACANP16112 2415 aa6□□□□□ -1.45
VAMP3-201ENST00000054666 TRGV1A0A0A0MS02 117 aa6□□□□□ -1.45
VAMP3-201ENST00000054666 H3BUT2 72 aa6□□□□□ -1.45
VAMP3-201ENST00000054666 RS1O15537 224 aa6□□□□□ -1.45
VAMP3-201ENST00000054666 IGLV1-51P01701 117 aa6□□□□□ -1.45
VAMP3-201ENST00000054666 IGHV3-53P01767 116 aa6□□□□□ -1.45
VAMP3-201ENST00000054666 PROK1P58294 105 aa6□□□□□ -1.45
VAMP3-201ENST00000054666 GTF2H5Q6ZYL4 71 aa6□□□□□ -1.45
VAMP3-201ENST00000054666 TMEM263Q8WUH6 116 aaKnown RBP6□□□□□ -1.45
VAMP3-201ENST00000054666 FAM110AQ9BQ89 295 aa6□□□□□ -1.45
VAMP3-201ENST00000054666 TM2D2Q9BX73 214 aa6□□□□□ -1.45
VAMP3-201ENST00000054666 VCX2Q9H322 139 aa6□□□□□ -1.45
VAMP3-201ENST00000054666 PF4P02776 101 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 AZU1P20160 251 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 C1orf158Q8N1D5 194 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 C1QTNF4Q9BXJ3 329 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 NHP2Q9NX24 153 aaKnown RBP5.99□□□□□ -1.45
VAMP3-201ENST00000054666 NACAE9PAV3 2078 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 HIVEP2P31629 2446 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 IGLV4-3A0A075B6K6 122 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 GAGE10A6NGK3 116 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 COTL1Q14019 142 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 NFE4Q86UQ8 179 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 NDUFA11Q86Y39 141 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 IL17DQ8TAD2 202 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 RNASE8Q8TDE3 154 aaKnown RBP5.99□□□□□ -1.45
VAMP3-201ENST00000054666 SMR3AQ99954 134 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 PYGO1Q9Y3Y4 419 aa5.99□□□□□ -1.45
VAMP3-201ENST00000054666 PDZD2O15018 2839 aa5.98□□□□□ -1.45
VAMP3-201ENST00000054666 MTORP42345 2549 aa5.98□□□□□ -1.45
VAMP3-201ENST00000054666 TMEM238LA0A1B0GVL6 79 aa5.98□□□□□ -1.45
VAMP3-201ENST00000054666 A6NJY4 79 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms