RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 1700042G07RikB1AUF7 90 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Akain1G3UWD5 69 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gm21900J3QP38 180 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 TtrP07309 147 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Vpreb1P13372 142 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gm614Q3V2K1 191 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Olfr312Q7TRZ9 308 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Olfr298Q7TS06 332 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 PaxxQ8K0Y7 205 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Cd276Q8VE98 316 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Rer1Q9CQU3 196 aaKnown RBP7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 ManbalQ9D8X0 85 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Ccl24Q9JKC0 119 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 PikfyveQ9Z1T6 2097 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gm3285A0A1W2P7U0 201 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gm3402K7N5P2 326 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Ifitm5O88728 134 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 P01821 116 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Efna1P52793 205 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Mfap2P55002 183 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Olfr1209Q3SXJ3 310 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gm5148Q8BGG2 154 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 PpcdcQ8BZB2 204 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Anapc10Q8K2H6 185 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Dkk4Q8VEJ3 221 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Olfr45Q8VGM1 311 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Lmo1Q924W9 156 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Ssbp3Q9D032 388 aa7.13□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gm28778A0A087WSK7 233 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gpr31F8VQN3 319 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Emp2O88662 172 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Ltb4rO88855 351 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 CtgfP29268 348 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Lim2P56563 173 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Ypel3P61237 119 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Mfsd4b3Q3UN21 355 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Immp2lQ8BPT6 175 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Sdhaf4Q8BTE0 104 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Lrrc26Q91W20 331 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Ubl3Q9Z2M6 117 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Notch4P31695 1964 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Znf318Q99PP2 2237 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Zfp292Q9Z2U2 2698 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Spg11Q3UHA3 2430 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Ighv1-36A0A0A6YXT2 117 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Obox6G3X9U1 347 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Bmpr1bP36898 502 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Atp5eP56382 52 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Rpl18aP62717 176 aaKnown RBP7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Esp1Q3LHH8 102 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Commd3Q63829 195 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Cd200r5Q8BTP3 270 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Olfr916Q8VG53 310 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Olfr992Q8VGC6 309 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Q9CRC3 126 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Dusp21Q9D9D8 189 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gnb1lQ9EQ15 326 aa7.12□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Trbv1A0A0B4J1G7 116 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Zfp937A2ANU7 503 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Efna4O08542 206 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Pet100P0DJE0 76 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Twist1P26687 206 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Nanos2P60322 136 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Neurog3P70661 214 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gpr183Q3U6B2 357 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Olfr506Q7TRU6 314 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Vmn1r198Q8R263 300 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Olfr498Q8VEW2 330 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 HpxQ91X72 460 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Eef1akmt1Q9CY45 214 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Raet1eQ9CZQ6 251 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gkn3Q9D0T7 191 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Tmbim6Q9D2C7 237 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 5530400C23RikQ9D3I0 173 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Dapl1Q9D757 107 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Fam213bQ9DB60 201 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Dock6Q8VDR9 2080 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 FrylF8VQ05 3007 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Fam131cA2ADB2 273 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Zfp493E9Q1L8 384 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gm17067E9Q6S4 354 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gata2O09100 480 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Vma21Q78T54 101 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Slc25a40Q8BGP6 337 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 GrpQ8R1I2 146 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Spata3Q9D9T6 193 aa7.11□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Trav6d-7A0A075B6B0 112 aa7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gm28269A0A087WSG3 125 aa7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gm11361A0A1Y7VKY1 152 aa7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 A0A286YD13 301 aa7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gm45062E0CZ38 131 aa7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gm10260F6YVP7 152 aa7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Gm21746J3QMM6 180 aa7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Foxq1O70220 400 aa7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Tcstv1O70619 171 aa7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Igkv7-33P01632 114 aa7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Sec61a1P61620 476 aaKnown RBP7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Rps18P62270 152 aaKnown RBP7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Tmem207P86045 143 aa7.1□□□□□ -1.27
Upf3b-201ENSMUST00000076265 Olfr323Q5NCD0 323 aa7.1□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms