RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 ODAMA1E959 279 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 OR2T8A6NH00 312 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 HMSDA8MTL9 139 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 H3BMG7 143 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 MPC2O95563 127 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 NAPSAO96009 420 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 SHBGP04278 402 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 FOXA3P55318 350 aaPredicted RBP1.73□□□□□ -2.13
RTTN-217ENST00000640393 UBE2BP63146 152 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 QRFPP83859 136 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 DEFA5Q01523 94 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 Q6ZQT0 140 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 AAED1Q7RTV5 226 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 ATOH7Q8N100 152 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 TTC9CQ8N5M4 171 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 C5orf17Q8NAS9 161 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 PLPP5Q8NEB5 264 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 ZNF431Q8TF32 576 aaPredicted RBP1.73□□□□□ -2.13
RTTN-217ENST00000640393 COPS9Q8WXC6 57 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 AQP3Q92482 292 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 CIB3Q96Q77 187 aaPredicted RBP1.73□□□□□ -2.13
RTTN-217ENST00000640393 YPEL2Q96QA6 119 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 SDF2Q99470 211 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 HIST1H2BLQ99880 126 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 NAA38Q9BRA0 125 aaKnown RBP1.73□□□□□ -2.13
RTTN-217ENST00000640393 TIMM21Q9BVV7 248 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 NOP16Q9Y3C1 178 aaKnown RBP1.73□□□□□ -2.13
RTTN-217ENST00000640393 RNF11Q9Y3C5 154 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 GCN1Q92616 2671 aaKnown RBP1.73□□□□□ -2.13
RTTN-217ENST00000640393 SDK1Q7Z5N4 2213 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 CHD9Q3L8U1 2897 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 DMDP11532 3685 aa1.73□□□□□ -2.13
RTTN-217ENST00000640393 FCGBPQ9Y6R7 5405 aaPredicted RBP1.73□□□□□ -2.13
RTTN-217ENST00000640393 USP24Q9UPU5 2620 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 TRAV3A0A0B4J244 114 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 FAM236AA0A1B0GUQ0 79 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 FAM236BA0A1B0GV22 79 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 ZNF727A8MUV8 499 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 CCDC179H3BU77 68 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 TMEM256-PLSCR3K7ERE1 68 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 TCL1BO95988 128 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 PMP2P02689 132 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 CD14P08571 375 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 CXCL1P09341 107 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 PYYP10082 97 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 HBBP68871 147 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 TMEM155Q4W5P6 130 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 FAM74A1Q5RGS3 127 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 C22orf39Q6P5X5 142 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 FOXI2Q6ZQN5 318 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 Q6ZTI0 123 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 PHF5AQ7RTV0 110 aaKnown RBP1.72□□□□□ -2.13
RTTN-217ENST00000640393 ZNF720Q7Z2F6 126 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 OR8B3Q8NGG8 313 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 ZNF563Q8TA94 476 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 SEC11CQ9BY50 192 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 NAA60Q9H7X0 242 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 PRO2289Q9P1D8 64 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 ANKRD11Q6UB99 2663 aaPredicted RBP1.72□□□□□ -2.13
RTTN-217ENST00000640393 NUMA1Q14980 2115 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 NCOR2Q9Y618 2525 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 PHIPQ8WWQ0 1821 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 MICAL3Q7RTP6 2002 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 IGKV1D-42A0A075B6H8 117 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 TRBV27A0A0K0K1C4 114 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 OR51F1A6NGY5 319 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 ZNF705FA8MVS1 300 aaPredicted RBP1.72□□□□□ -2.13
RTTN-217ENST00000640393 C19orf84I3L1E1 186 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 M0R233 179 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 HIST1H2BKO60814 126 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 TCRAP04437 139 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 HIST1H2BJP06899 126 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 NMBP08949 121 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 SPINK8P0C7L1 97 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 IFITM1P13164 125 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 RNASE4P34096 147 aaKnown RBP1.72□□□□□ -2.13
RTTN-217ENST00000640393 UBA52P62987 128 aaKnown RBP1.72□□□□□ -2.13
RTTN-217ENST00000640393 CATR1Q13166 79 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 DIAPH2-AS1Q14236 149 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 KRTAP21-3Q3LHN1 58 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 MRPL54Q6P161 138 aaKnown RBP1.72□□□□□ -2.13
RTTN-217ENST00000640393 SOSTDC1Q6X4U4 206 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 KCNRGQ8N5I3 272 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 C3orf56Q8N813 242 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 RAB37Q96AX2 223 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 DPH3Q96FX2 82 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 MCEEQ96PE7 176 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 DPY30Q9C005 99 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 BET1LQ9NYM9 111 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 COMMD3Q9UBI1 195 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 EPDR1Q9UM22 224 aa1.72□□□□□ -2.13
RTTN-217ENST00000640393 NUP210Q8TEM1 1887 aaPredicted RBP1.72□□□□□ -2.13
RTTN-217ENST00000640393 MAP1BP46821 2468 aaKnown RBP1.71□□□□□ -2.13
RTTN-217ENST00000640393 DNAH12Q6ZR08 3092 aa1.71□□□□□ -2.13
RTTN-217ENST00000640393 ASH1LQ9NR48 2969 aaKnown RBP1.71□□□□□ -2.14
RTTN-217ENST00000640393 DMXL1Q9Y485 3027 aa1.71□□□□□ -2.14
RTTN-217ENST00000640393 TECTAO75443 2155 aa1.71□□□□□ -2.14
RTTN-217ENST00000640393 RP1P56715 2156 aa1.71□□□□□ -2.14
RTTN-217ENST00000640393 NCOR1O75376 2440 aa1.71□□□□□ -2.14
RTTN-217ENST00000640393 TRGV10A0A0A0MS01 117 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms