RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 PKHD1P08F94 4074 aa14.93□□□□□ -0.02
SCN1B-206ENST00000638536 RNASE7Q9H1E1 156 aaKnown RBP14.92□□□□□ -0.02
SCN1B-206ENST00000638536 NXPH4O95158 308 aa14.92□□□□□ -0.02
SCN1B-206ENST00000638536 SRP19P09132 144 aaKnown RBP14.92□□□□□ -0.02
SCN1B-206ENST00000638536 OR5AL1P0C617 328 aa14.92□□□□□ -0.02
SCN1B-206ENST00000638536 RHOHQ15669 191 aa14.92□□□□□ -0.02
SCN1B-206ENST00000638536 P01737 135 aa14.91□□□□□ -0.02
SCN1B-206ENST00000638536 IGLC6P0CF74 106 aa14.91□□□□□ -0.02
SCN1B-206ENST00000638536 SRSF3P84103 164 aaKnown RBP14.91□□□□□ -0.02
SCN1B-206ENST00000638536 C9JQL5 133 aa14.9□□□□□ -0.02
SCN1B-206ENST00000638536 PRADC1Q9BSG0 188 aa14.9□□□□□ -0.02
SCN1B-206ENST00000638536 TPPP3Q9BW30 176 aa14.89□□□□□ -0.03
SCN1B-206ENST00000638536 DNAH11Q96DT5 4516 aa14.88□□□□□ -0.03
SCN1B-206ENST00000638536 SPANXN1Q5VSR9 72 aa14.88□□□□□ -0.03
SCN1B-206ENST00000638536 WFDC10BQ8IUB3 73 aa14.88□□□□□ -0.03
SCN1B-206ENST00000638536 FER1L6-AS1Q8NA97 138 aa14.88□□□□□ -0.03
SCN1B-206ENST00000638536 MSRB1Q9NZV6 116 aa14.88□□□□□ -0.03
SCN1B-206ENST00000638536 GAGE12JA6NER3 117 aa14.87□□□□□ -0.03
SCN1B-206ENST00000638536 SIVA1O15304 175 aa14.87□□□□□ -0.03
SCN1B-206ENST00000638536 GAGE1Q13065 139 aa14.87□□□□□ -0.03
SCN1B-206ENST00000638536 GAGE4Q13068 117 aa14.87□□□□□ -0.03
SCN1B-206ENST00000638536 GAGE5Q13069 117 aa14.87□□□□□ -0.03
SCN1B-206ENST00000638536 GAGE13Q4V321 117 aa14.87□□□□□ -0.03
SCN1B-206ENST00000638536 C1orf134Q5TEV5 83 aa14.87□□□□□ -0.03
SCN1B-206ENST00000638536 BIN3Q9NQY0 253 aa14.87□□□□□ -0.03
SCN1B-206ENST00000638536 RHODO00212 210 aa14.86□□□□□ -0.03
SCN1B-206ENST00000638536 LINC00694P0DN24 101 aa14.86□□□□□ -0.03
SCN1B-206ENST00000638536 RPS20P60866 119 aaKnown RBP14.86□□□□□ -0.03
SCN1B-206ENST00000638536 SMIM7Q9BQ49 75 aa14.86□□□□□ -0.03
SCN1B-206ENST00000638536 NDUFS6O75380 124 aaKnown RBP14.85□□□□□ -0.03
SCN1B-206ENST00000638536 LYZL1Q6UWQ5 148 aa14.84□□□□□ -0.03
SCN1B-206ENST00000638536 RPP21Q9H633 154 aaKnown RBP14.84□□□□□ -0.03
SCN1B-206ENST00000638536 KIF25-AS1Q9Y6Z4 181 aa14.84□□□□□ -0.03
SCN1B-206ENST00000638536 ZNF727A8MUV8 499 aa14.84□□□□□ -0.03
SCN1B-206ENST00000638536 ATP6V0E2Q8NHE4 81 aa14.84□□□□□ -0.03
SCN1B-206ENST00000638536 LINC00315P59091 139 aa14.83□□□□□ -0.04
SCN1B-206ENST00000638536 SH2D6Q7Z4S9 175 aa14.83□□□□□ -0.04
SCN1B-206ENST00000638536 LINC01551Q86U37 167 aa14.83□□□□□ -0.04
SCN1B-206ENST00000638536 C6orf223Q8N319 242 aa14.83□□□□□ -0.04
SCN1B-206ENST00000638536 PRSS29PA6NIE9 313 aa14.82□□□□□ -0.04
SCN1B-206ENST00000638536 GTSF1Q8WW33 167 aa14.82□□□□□ -0.04
SCN1B-206ENST00000638536 XKRY2A2RUG3 117 aa14.81□□□□□ -0.04
SCN1B-206ENST00000638536 LINC00336Q6ZUF6 198 aa14.81□□□□□ -0.04
SCN1B-206ENST00000638536 LY96Q9Y6Y9 160 aa14.81□□□□□ -0.04
SCN1B-206ENST00000638536 TIRAPP58753 221 aa14.81□□□□□ -0.04
SCN1B-206ENST00000638536 ZNF56Q15929 161 aa14.81□□□□□ -0.04
SCN1B-206ENST00000638536 GTSF1LQ9H1H1 148 aa14.81□□□□□ -0.04
SCN1B-206ENST00000638536 TNFRSF18Q9Y5U5 241 aa14.81□□□□□ -0.04
SCN1B-206ENST00000638536 A0A1B0GVY2 172 aa14.8□□□□□ -0.04
SCN1B-206ENST00000638536 TTC32Q5I0X7 151 aa14.8□□□□□ -0.04
SCN1B-206ENST00000638536 FAM231DQ6ZW35 169 aa14.8□□□□□ -0.04
SCN1B-206ENST00000638536 A0A1W2PPQ1 181 aa14.79□□□□□ -0.04
SCN1B-206ENST00000638536 F2Z2F3 143 aa14.79□□□□□ -0.04
SCN1B-206ENST00000638536 GATCO43716 136 aaKnown RBP14.79□□□□□ -0.04
SCN1B-206ENST00000638536 NTF3P20783 257 aa14.79□□□□□ -0.04
SCN1B-206ENST00000638536 RAB4BP61018 213 aa14.79□□□□□ -0.04
SCN1B-206ENST00000638536 EVI2AP22794 236 aa14.78□□□□□ -0.04
SCN1B-206ENST00000638536 CTRLP40313 264 aa14.78□□□□□ -0.04
SCN1B-206ENST00000638536 ERVFC1-1P60608 527 aa14.78□□□□□ -0.04
SCN1B-206ENST00000638536 AP1S3Q96PC3 154 aa14.78□□□□□ -0.04
SCN1B-206ENST00000638536 DNAH10OSP0CZ25 163 aa14.77□□□□□ -0.04
SCN1B-206ENST00000638536 CACNG7P62955 275 aa14.77□□□□□ -0.04
SCN1B-206ENST00000638536 TNP2Q05952 138 aa14.77□□□□□ -0.04
SCN1B-206ENST00000638536 PEA15Q15121 130 aa14.77□□□□□ -0.04
SCN1B-206ENST00000638536 SOHLH1Q5JUK2 328 aa14.77□□□□□ -0.04
SCN1B-206ENST00000638536 DYNC1H1Q14204 4646 aaKnown RBP14.77□□□□□ -0.05
SCN1B-206ENST00000638536 F5H697 171 aa14.77□□□□□ -0.05
SCN1B-206ENST00000638536 IFITM2Q01629 132 aa14.77□□□□□ -0.05
SCN1B-206ENST00000638536 LELP1Q5T871 98 aa14.77□□□□□ -0.05
SCN1B-206ENST00000638536 NEXN-AS1Q8NBZ9 246 aa14.77□□□□□ -0.05
SCN1B-206ENST00000638536 OR10J3Q5JRS4 329 aa14.76□□□□□ -0.05
SCN1B-206ENST00000638536 Q8N3U1 123 aa14.76□□□□□ -0.05
SCN1B-206ENST00000638536 CNFNQ9BYD5 112 aa14.76□□□□□ -0.05
SCN1B-206ENST00000638536 TRBV10-1A0A0K0K1A3 114 aa14.75□□□□□ -0.05
SCN1B-206ENST00000638536 RPL23P62829 140 aaKnown RBP14.75□□□□□ -0.05
SCN1B-206ENST00000638536 TMEM241Q24JQ0 296 aa14.75□□□□□ -0.05
SCN1B-206ENST00000638536 TRBV7-3A0A075B6L6 115 aa14.74□□□□□ -0.05
SCN1B-206ENST00000638536 IGHV3-38A0A0C4DH36 116 aa14.74□□□□□ -0.05
SCN1B-206ENST00000638536 MGPP08493 103 aa14.74□□□□□ -0.05
SCN1B-206ENST00000638536 SMIM17P0DL12 118 aa14.74□□□□□ -0.05
SCN1B-206ENST00000638536 UBE2D3P61077 147 aa14.74□□□□□ -0.05
SCN1B-206ENST00000638536 UBE2D2P62837 147 aa14.74□□□□□ -0.05
SCN1B-206ENST00000638536 RPL36AP83881 106 aaKnown RBP14.74□□□□□ -0.05
SCN1B-206ENST00000638536 TWIST1Q15672 202 aa14.74□□□□□ -0.05
SCN1B-206ENST00000638536 FAM74A3Q4VXF1 159 aa14.74□□□□□ -0.05
SCN1B-206ENST00000638536 WDR73Q6P4I2 378 aa14.74□□□□□ -0.05
SCN1B-206ENST00000638536 OR10G8Q8NGN5 311 aa14.74□□□□□ -0.05
SCN1B-206ENST00000638536 RPL36ALQ969Q0 106 aaKnown RBP14.74□□□□□ -0.05
SCN1B-206ENST00000638536 ISOC2Q96AB3 205 aa14.74□□□□□ -0.05
SCN1B-206ENST00000638536 PGLYRP4Q96LB8 373 aa14.74□□□□□ -0.05
SCN1B-206ENST00000638536 TRAV8-6A0A0B4J262 113 aa14.73□□□□□ -0.05
SCN1B-206ENST00000638536 A8MWL6 223 aa14.73□□□□□ -0.05
SCN1B-206ENST00000638536 FOXA3P55318 350 aaPredicted RBP14.73□□□□□ -0.05
SCN1B-206ENST00000638536 Q6ZRN7 208 aaPredicted RBP14.73□□□□□ -0.05
SCN1B-206ENST00000638536 SMDT1Q9H4I9 107 aa14.73□□□□□ -0.05
SCN1B-206ENST00000638536 OSTCQ9NRP0 149 aa14.73□□□□□ -0.05
SCN1B-206ENST00000638536 CT83Q5H943 113 aa14.72□□□□□ -0.05
SCN1B-206ENST00000638536 SUMO4Q6EEV6 95 aa14.72□□□□□ -0.05
SCN1B-206ENST00000638536 V9GYV3 84 aa14.72□□□□□ -0.05
SCN1B-206ENST00000638536 M0QY20 66 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms