RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 TRAV8-6A0A0B4J262 113 aa11.9□□□□□ -0.5
PNKP-230ENST00000638016 PIK3CD-AS1Q5SR53 167 aa11.9□□□□□ -0.5
PNKP-230ENST00000638016 SYT8Q8NBV8 401 aa11.9□□□□□ -0.5
PNKP-230ENST00000638016 MLST8Q9BVC4 326 aa11.9□□□□□ -0.5
PNKP-230ENST00000638016 GNG13Q9P2W3 67 aa11.9□□□□□ -0.5
PNKP-230ENST00000638016 PHLDA3Q9Y5J5 127 aa11.9□□□□□ -0.5
PNKP-230ENST00000638016 MUC21A0A0G2JKD1 596 aa11.89□□□□□ -0.51
PNKP-230ENST00000638016 MUC21A0A140T8X8 626 aa11.89□□□□□ -0.51
PNKP-230ENST00000638016 EIF5AP63241 154 aaKnown RBP11.89□□□□□ -0.51
PNKP-230ENST00000638016 PRR27Q6MZM9 219 aa11.89□□□□□ -0.51
PNKP-230ENST00000638016 BAGE2Q86Y30 109 aa11.89□□□□□ -0.51
PNKP-230ENST00000638016 C10orf126Q8N4M7 172 aa11.89□□□□□ -0.51
PNKP-230ENST00000638016 SFRP2Q96HF1 295 aa11.89□□□□□ -0.51
PNKP-230ENST00000638016 FAT1Q14517 4588 aa11.88□□□□□ -0.51
PNKP-230ENST00000638016 OR10AG1Q8NH19 301 aa11.88□□□□□ -0.51
PNKP-230ENST00000638016 IBA57-AS1B1ANH7 110 aa11.87□□□□□ -0.51
PNKP-230ENST00000638016 K7EP13 123 aa11.87□□□□□ -0.51
PNKP-230ENST00000638016 RPL35P42766 123 aaKnown RBP11.87□□□□□ -0.51
PNKP-230ENST00000638016 RHODO00212 210 aa11.86□□□□□ -0.51
PNKP-230ENST00000638016 KRTAP10-1P60331 282 aa11.86□□□□□ -0.51
PNKP-230ENST00000638016 TCTE3Q8IZS6 198 aa11.86□□□□□ -0.51
PNKP-230ENST00000638016 ZFP82Q8N141 532 aa11.86□□□□□ -0.51
PNKP-230ENST00000638016 LRCOL1A6NCL2 159 aa11.85□□□□□ -0.51
PNKP-230ENST00000638016 EREGO14944 169 aa11.85□□□□□ -0.51
PNKP-230ENST00000638016 S100A9P06702 114 aaKnown RBP11.85□□□□□ -0.51
PNKP-230ENST00000638016 SSTP61278 116 aa11.85□□□□□ -0.51
PNKP-230ENST00000638016 PGPEP1Q9NXJ5 209 aa11.85□□□□□ -0.51
PNKP-230ENST00000638016 hCG_2014768A0A024R1R8 64 aa11.84□□□□□ -0.51
PNKP-230ENST00000638016 SULT1A2P50226 295 aa11.84□□□□□ -0.51
PNKP-230ENST00000638016 Q6ZNX1 250 aa11.84□□□□□ -0.51
PNKP-230ENST00000638016 DAZ4Q86SG3 579 aaKnown RBP11.84□□□□□ -0.51
PNKP-230ENST00000638016 C11orf52Q96A22 123 aa11.84□□□□□ -0.51
PNKP-230ENST00000638016 MANBALQ9NQG1 85 aa11.84□□□□□ -0.51
PNKP-230ENST00000638016 DAZ3Q9NR90 486 aaKnown RBP11.84□□□□□ -0.51
PNKP-230ENST00000638016 TRAV1-1A0A0B4J248 108 aa11.83□□□□□ -0.52
PNKP-230ENST00000638016 RAB19A4D1S5 217 aa11.83□□□□□ -0.52
PNKP-230ENST00000638016 PSCAO43653 123 aa11.83□□□□□ -0.52
PNKP-230ENST00000638016 IGLV2-8P01709 118 aa11.83□□□□□ -0.52
PNKP-230ENST00000638016 CENPWQ5EE01 88 aa11.83□□□□□ -0.52
PNKP-230ENST00000638016 DNAJC30Q96LL9 226 aa11.83□□□□□ -0.52
PNKP-230ENST00000638016 GZMBP10144 247 aa11.82□□□□□ -0.52
PNKP-230ENST00000638016 WFDC2Q14508 124 aa11.82□□□□□ -0.52
PNKP-230ENST00000638016 Q8N1X5 172 aa11.82□□□□□ -0.52
PNKP-230ENST00000638016 SNAI2O43623 268 aa11.81□□□□□ -0.52
PNKP-230ENST00000638016 C1QBP02746 253 aa11.81□□□□□ -0.52
PNKP-230ENST00000638016 RAB5CP51148 216 aa11.81□□□□□ -0.52
PNKP-230ENST00000638016 CDPF1Q6NVV7 123 aa11.81□□□□□ -0.52
PNKP-230ENST00000638016 DNAH8Q96JB1 4490 aa11.8□□□□□ -0.52
PNKP-230ENST00000638016 RBFOX3A6NFN3 312 aa11.8□□□□□ -0.52
PNKP-230ENST00000638016 CXCL1P09341 107 aa11.8□□□□□ -0.52
PNKP-230ENST00000638016 XGP55808 180 aa11.8□□□□□ -0.52
PNKP-230ENST00000638016 HAMPP81172 84 aa11.8□□□□□ -0.52
PNKP-230ENST00000638016 ZNF56Q15929 161 aa11.8□□□□□ -0.52
PNKP-230ENST00000638016 SSBP4Q9BWG4 385 aaPredicted RBP11.8□□□□□ -0.52
PNKP-230ENST00000638016 TRBV20OR9-2A0A075B6H5 130 aa11.79□□□□□ -0.52
PNKP-230ENST00000638016 UBE2D3P61077 147 aa11.79□□□□□ -0.52
PNKP-230ENST00000638016 UBE2D2P62837 147 aa11.79□□□□□ -0.52
PNKP-230ENST00000638016 SLC51BQ86UW2 128 aa11.79□□□□□ -0.52
PNKP-230ENST00000638016 LECT2O14960 151 aa11.78□□□□□ -0.52
PNKP-230ENST00000638016 OR5AL1P0C617 328 aa11.78□□□□□ -0.52
PNKP-230ENST00000638016 MEF2BQ02080 365 aaPredicted RBP11.78□□□□□ -0.52
PNKP-230ENST00000638016 LAGE3Q14657 143 aa11.78□□□□□ -0.52
PNKP-230ENST00000638016 SPANXN1Q5VSR9 72 aa11.78□□□□□ -0.52
PNKP-230ENST00000638016 EIF5AL1Q6IS14 154 aaKnown RBP11.78□□□□□ -0.52
PNKP-230ENST00000638016 NIT1Q86X76 327 aa11.78□□□□□ -0.52
PNKP-230ENST00000638016 C9orf62Q8N4C0 152 aa11.78□□□□□ -0.52
PNKP-230ENST00000638016 NEXN-AS1Q8NBZ9 246 aa11.78□□□□□ -0.52
PNKP-230ENST00000638016 A0A087WWC5 75 aa11.77□□□□□ -0.53
PNKP-230ENST00000638016 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.53
PNKP-230ENST00000638016 C19orf71A6NCJ1 209 aa11.77□□□□□ -0.53
PNKP-230ENST00000638016 BCL2P10415 239 aa11.77□□□□□ -0.53
PNKP-230ENST00000638016 RPL36AP83881 106 aaKnown RBP11.77□□□□□ -0.53
PNKP-230ENST00000638016 Q8N814 137 aa11.77□□□□□ -0.53
PNKP-230ENST00000638016 RPL36ALQ969Q0 106 aaKnown RBP11.77□□□□□ -0.53
PNKP-230ENST00000638016 TPPP3Q9BW30 176 aa11.77□□□□□ -0.53
PNKP-230ENST00000638016 TRBV7-3A0A075B6L6 115 aa11.76□□□□□ -0.53
PNKP-230ENST00000638016 IGLV5-52A0A0A0MRZ9 124 aa11.76□□□□□ -0.53
PNKP-230ENST00000638016 GCSHP23434 173 aa11.76□□□□□ -0.53
PNKP-230ENST00000638016 GNG4P50150 75 aa11.76□□□□□ -0.53
PNKP-230ENST00000638016 RAB4BP61018 213 aa11.76□□□□□ -0.53
PNKP-230ENST00000638016 AKAP14Q86UN6 197 aa11.76□□□□□ -0.53
PNKP-230ENST00000638016 OR2D3Q8NGH3 330 aa11.76□□□□□ -0.53
PNKP-230ENST00000638016 MED9Q9NWA0 146 aa11.76□□□□□ -0.53
PNKP-230ENST00000638016 KIF25-AS1Q9Y6Z4 181 aa11.76□□□□□ -0.53
PNKP-230ENST00000638016 TEX46H3BTG2 121 aa11.75□□□□□ -0.53
PNKP-230ENST00000638016 IGLC6P0CF74 106 aa11.75□□□□□ -0.53
PNKP-230ENST00000638016 OR10G8Q8NGN5 311 aa11.75□□□□□ -0.53
PNKP-230ENST00000638016 KLK12Q9UKR0 248 aa11.75□□□□□ -0.53
PNKP-230ENST00000638016 BOLA1Q9Y3E2 137 aa11.75□□□□□ -0.53
PNKP-230ENST00000638016 F5H697 171 aa11.74□□□□□ -0.53
PNKP-230ENST00000638016 FER1L6-AS1Q8NA97 138 aa11.74□□□□□ -0.53
PNKP-230ENST00000638016 PDE6DO43924 150 aa11.73□□□□□ -0.53
PNKP-230ENST00000638016 IFNA1P01562 189 aa11.73□□□□□ -0.53
PNKP-230ENST00000638016 ALKAL2Q6UX46 152 aa11.73□□□□□ -0.53
PNKP-230ENST00000638016 VAX2Q9UIW0 290 aa11.73□□□□□ -0.53
PNKP-230ENST00000638016 TRAV8-3A0A0A6YYJ7 113 aa11.72□□□□□ -0.53
PNKP-230ENST00000638016 MGPP08493 103 aa11.72□□□□□ -0.53
PNKP-230ENST00000638016 BAALCQ8WXS3 180 aa11.72□□□□□ -0.53
PNKP-230ENST00000638016 UBE2WQ96B02 151 aa11.72□□□□□ -0.53
PNKP-230ENST00000638016 DAZAP1Q96EP5 407 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms