RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 IGHV7-4-1A0A0J9YVY3 117 aa11.92□□□□□ -0.5
UBE3A-227ENST00000638011 CGB3P0DN86 165 aa11.92□□□□□ -0.5
UBE3A-227ENST00000638011 KIR2DL5BQ8NHK3 375 aa11.92□□□□□ -0.5
UBE3A-227ENST00000638011 C16orf54Q6UWD8 224 aa11.91□□□□□ -0.5
UBE3A-227ENST00000638011 Q6ZS92 163 aa11.91□□□□□ -0.5
UBE3A-227ENST00000638011 FGF23Q9GZV9 251 aaPredicted RBP11.91□□□□□ -0.5
UBE3A-227ENST00000638011 ODF1Q14990 250 aa11.91□□□□□ -0.5
UBE3A-227ENST00000638011 CRIPAKQ8N1N5 446 aa11.91□□□□□ -0.5
UBE3A-227ENST00000638011 MIAQ16674 131 aa11.91□□□□□ -0.5
UBE3A-227ENST00000638011 FAM120AOSQ5T036 256 aa11.91□□□□□ -0.5
UBE3A-227ENST00000638011 XCL2Q9UBD3 114 aa11.91□□□□□ -0.5
UBE3A-227ENST00000638011 BLCAPP62952 87 aa11.91□□□□□ -0.5
UBE3A-227ENST00000638011 HIST2H2BDQ6DRA6 164 aa11.91□□□□□ -0.5
UBE3A-227ENST00000638011 DKK4Q9UBT3 224 aa11.9□□□□□ -0.5
UBE3A-227ENST00000638011 P0DMU3 169 aa11.9□□□□□ -0.5
UBE3A-227ENST00000638011 FAM231AP0DMU4 169 aa11.9□□□□□ -0.5
UBE3A-227ENST00000638011 FAM231CP0DMU5 169 aa11.9□□□□□ -0.5
UBE3A-227ENST00000638011 TEX36Q5VZQ5 186 aa11.9□□□□□ -0.5
UBE3A-227ENST00000638011 C9orf47Q6ZRZ4 202 aa11.9□□□□□ -0.5
UBE3A-227ENST00000638011 KLK9Q9UKQ9 250 aa11.9□□□□□ -0.5
UBE3A-227ENST00000638011 C20orf197Q8N268 126 aa11.9□□□□□ -0.5
UBE3A-227ENST00000638011 FAM110AQ9BQ89 295 aa11.9□□□□□ -0.5
UBE3A-227ENST00000638011 DEFB104AQ8WTQ1 72 aa11.9□□□□□ -0.5
UBE3A-227ENST00000638011 LECT2O14960 151 aa11.9□□□□□ -0.5
UBE3A-227ENST00000638011 WI2-2373I1.2A0A1W2PRP0 233 aa11.89□□□□□ -0.51
UBE3A-227ENST00000638011 NDUFA1O15239 70 aa11.89□□□□□ -0.51
UBE3A-227ENST00000638011 ATP6V0E1O15342 81 aa11.89□□□□□ -0.51
UBE3A-227ENST00000638011 PRR20EP86478 221 aa11.89□□□□□ -0.51
UBE3A-227ENST00000638011 PRR20CP86479 221 aa11.89□□□□□ -0.51
UBE3A-227ENST00000638011 PRR20DP86480 221 aa11.89□□□□□ -0.51
UBE3A-227ENST00000638011 PRR20BP86481 221 aa11.89□□□□□ -0.51
UBE3A-227ENST00000638011 PRR20AP86496 221 aa11.89□□□□□ -0.51
UBE3A-227ENST00000638011 IGHV3-16A0A0C4DH30 117 aa11.89□□□□□ -0.51
UBE3A-227ENST00000638011 J3QLI3 93 aa11.89□□□□□ -0.51
UBE3A-227ENST00000638011 GTSF1Q8WW33 167 aa11.89□□□□□ -0.51
UBE3A-227ENST00000638011 TIRAPP58753 221 aa11.88□□□□□ -0.51
UBE3A-227ENST00000638011 C16orf74Q96GX8 76 aa11.88□□□□□ -0.51
UBE3A-227ENST00000638011 FAM19A3Q7Z5A8 133 aa11.88□□□□□ -0.51
UBE3A-227ENST00000638011 TM2D2Q9BX73 214 aa11.88□□□□□ -0.51
UBE3A-227ENST00000638011 IGLC6P0CF74 106 aa11.88□□□□□ -0.51
UBE3A-227ENST00000638011 WFDC11Q8NEX6 87 aa11.88□□□□□ -0.51
UBE3A-227ENST00000638011 K7EQD1 137 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 TCL1BO95988 128 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 ANKRD39Q53RE8 183 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 UNQ6494/PRO21346Q6UXR6 183 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 SMIM26A0A096LP01 95 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 CSRP2Q16527 193 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 MBD3L4A6NDZ8 208 aaPredicted RBP11.87□□□□□ -0.51
UBE3A-227ENST00000638011 MBD3L3A6NE82 208 aaPredicted RBP11.87□□□□□ -0.51
UBE3A-227ENST00000638011 MBD3L5A6NJ08 208 aaPredicted RBP11.87□□□□□ -0.51
UBE3A-227ENST00000638011 IGKV1-39P01597 117 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 IGKV1D-39P04432 117 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 PRR31Q5SQ13 230 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 MBD3L2Q8NHZ7 208 aaPredicted RBP11.87□□□□□ -0.51
UBE3A-227ENST00000638011 CAMK2N2Q96S95 79 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 IGHV4-28A0A0C4DH34 117 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 IGKV1-6A0A0C4DH72 117 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 WT1-ASQ06250 92 aa11.87□□□□□ -0.51
UBE3A-227ENST00000638011 A0A0J9YXY3 114 aa11.86□□□□□ -0.51
UBE3A-227ENST00000638011 TRBV6-1A0A0K0K1D8 114 aa11.86□□□□□ -0.51
UBE3A-227ENST00000638011 WISP1O95388 367 aa11.86□□□□□ -0.51
UBE3A-227ENST00000638011 TDRG1Q3Y452 100 aa11.86□□□□□ -0.51
UBE3A-227ENST00000638011 IGF2BP2-AS1Q96M15 143 aa11.86□□□□□ -0.51
UBE3A-227ENST00000638011 RPL18AQ02543 176 aaKnown RBP11.86□□□□□ -0.51
UBE3A-227ENST00000638011 TEX49A0A1B0GTD5 131 aa11.86□□□□□ -0.51
UBE3A-227ENST00000638011 WIPF3A6NGB9 483 aa11.86□□□□□ -0.51
UBE3A-227ENST00000638011 PRB4P10163 310 aaPredicted RBP11.86□□□□□ -0.51
UBE3A-227ENST00000638011 Q6Q795 121 aa11.86□□□□□ -0.51
UBE3A-227ENST00000638011 COX7CP15954 63 aa11.85□□□□□ -0.51
UBE3A-227ENST00000638011 TIMM17BO60830 172 aa11.85□□□□□ -0.51
UBE3A-227ENST00000638011 H0Y9J4 135 aa11.85□□□□□ -0.51
UBE3A-227ENST00000638011 TFF2Q03403 129 aa11.85□□□□□ -0.51
UBE3A-227ENST00000638011 FLVCR1-AS1Q8TAF5 88 aa11.85□□□□□ -0.51
UBE3A-227ENST00000638011 MT-ATP8P03928 68 aa11.85□□□□□ -0.51
UBE3A-227ENST00000638011 IGFL4Q6B9Z1 124 aa11.84□□□□□ -0.51
UBE3A-227ENST00000638011 CDPF1Q6NVV7 123 aa11.84□□□□□ -0.51
UBE3A-227ENST00000638011 MDFICQ9P1T7 246 aa11.84□□□□□ -0.51
UBE3A-227ENST00000638011 TEX22C9J3V5 150 aa11.84□□□□□ -0.51
UBE3A-227ENST00000638011 ABCA12Q86UK0 2595 aa11.84□□□□□ -0.51
UBE3A-227ENST00000638011 SERP1Q9Y6X1 66 aa11.84□□□□□ -0.51
UBE3A-227ENST00000638011 IGHV3-38A0A0C4DH36 116 aa11.83□□□□□ -0.52
UBE3A-227ENST00000638011 SEM1Q6ZVN7 128 aa11.83□□□□□ -0.52
UBE3A-227ENST00000638011 ZNF491Q8N8L2 437 aa11.83□□□□□ -0.52
UBE3A-227ENST00000638011 IGKV2D-24A0A075B6R9 120 aa11.83□□□□□ -0.52
UBE3A-227ENST00000638011 GNLYP22749 145 aa11.83□□□□□ -0.52
UBE3A-227ENST00000638011 CLEC2BQ92478 149 aa11.82□□□□□ -0.52
UBE3A-227ENST00000638011 KAAG1Q9UBP8 84 aa11.82□□□□□ -0.52
UBE3A-227ENST00000638011 RNF138Q8WVD3 245 aa11.82□□□□□ -0.52
UBE3A-227ENST00000638011 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.82□□□□□ -0.52
UBE3A-227ENST00000638011 IGKV2-29A2NJV5 120 aaPredicted RBP11.82□□□□□ -0.52
UBE3A-227ENST00000638011 ATP1A1-AS1Q5TC04 95 aa11.82□□□□□ -0.52
UBE3A-227ENST00000638011 COX7BP24311 80 aa11.81□□□□□ -0.52
UBE3A-227ENST00000638011 PMAIP1Q13794 54 aa11.81□□□□□ -0.52
UBE3A-227ENST00000638011 SPRY4Q9C004 299 aa11.81□□□□□ -0.52
UBE3A-227ENST00000638011 RETNQ9HD89 108 aa11.81□□□□□ -0.52
UBE3A-227ENST00000638011 SDIM1Q6ZPB5 146 aa11.81□□□□□ -0.52
UBE3A-227ENST00000638011 PIEZO2Q9H5I5 2752 aa11.81□□□□□ -0.52
UBE3A-227ENST00000638011 ZMAT4Q9H898 229 aa11.81□□□□□ -0.52
UBE3A-227ENST00000638011 H7C423 109 aa11.8□□□□□ -0.52
UBE3A-227ENST00000638011 MSMBP08118 114 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms