RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-223ENST00000637293 ACYP1P07311 99 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 CTSGP08311 255 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 COX6CP09669 75 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 IGLC2P0DOY2 106 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 IGLC3P0DOY3 106 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 HRES1P13985 223 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 DMAC1Q96GE9 116 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 FAM167A-AS1Q96KT0 104 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 NXT2Q9NPJ8 142 aaKnown RBP1.54□□□□□ -2.16
GABRB3-223ENST00000637293 PRO1854Q9UHT4 67 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 TP53TG3Q9ULZ0 132 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 PTPRMP28827 1452 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 MLH3Q9UHC1 1453 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 ABCC2Q92887 1545 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 UNC13BO14795 1591 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 LRP5O75197 1615 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 COL16A1Q07092 1604 aaPredicted RBP1.54□□□□□ -2.16
GABRB3-223ENST00000637293 NWD2Q9ULI1 1742 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 STRCQ7RTU9 1775 aa1.54□□□□□ -2.16
GABRB3-223ENST00000637293 COL11A1P12107 1806 aaPredicted RBP1.54□□□□□ -2.16
GABRB3-223ENST00000637293 TRAV12-3A0A0B4J271 114 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 SLIT2O94813 1529 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 CFDP00746 253 aaPredicted RBP1.53□□□□□ -2.16
GABRB3-223ENST00000637293 ABCC1P33527 1531 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 DSCR10P59022 87 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 SNRPFP62306 86 aaKnown RBP1.53□□□□□ -2.16
GABRB3-223ENST00000637293 SHROOM2Q13796 1616 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 ETDBQ3ZM63 59 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 Q5BKY6 102 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 IQSEC2Q5JU85 1478 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 PRR14LQ5THK1 2151 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 LYPD5Q6UWN5 251 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 C9orf163Q8N9P6 203 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 DISP1Q96F81 1524 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 KRTAP4-5Q9BYR2 181 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 CFAP74Q9C0B2 1584 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 PLXNA4Q9HCM2 1894 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 KIAA1549Q9HCM3 1950 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 MANBALQ9NQG1 85 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 DIP2BQ9P265 1576 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 LINC00474Q9P2X8 69 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 NRXN1Q9ULB1 1477 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 CCL26Q9Y258 94 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 MYO16Q9Y6X6 1858 aa1.53□□□□□ -2.16
GABRB3-223ENST00000637293 PTPRFP10586 1907 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 MYO3AQ8NEV4 1616 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 SLIT3O75094 1523 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 KCPQ6ZWJ8 1503 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 SHANK2Q9UPX8 1470 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 BLMP54132 1417 aaPredicted RBP1.52□□□□□ -2.17
GABRB3-223ENST00000637293 EDC4Q6P2E9 1401 aaKnown RBP1.52□□□□□ -2.17
GABRB3-223ENST00000637293 IGKV2-28A0A075B6P5 120 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 A0A0J9YY99 117 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 F2Z2F3 143 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 IGKV2D-28P01615 120 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 P0C880 135 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 PRB4P10163 310 aaPredicted RBP1.52□□□□□ -2.17
GABRB3-223ENST00000637293 CNBPP62633 177 aaKnown RBP1.52□□□□□ -2.17
GABRB3-223ENST00000637293 PMCHL1Q16048 86 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 C10orf128Q5T292 105 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 BVES-AS1Q5T3Y7 98 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 SPINK14Q6IE38 97 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 PATE1Q8WXA2 126 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 IFI27L1Q96BM0 104 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 LIMD2Q9BT23 127 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 FREM3P0C091 2139 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 TRPM7Q96QT4 1865 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 TANC1Q9C0D5 1861 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 SCN11AQ9UI33 1791 aa1.52□□□□□ -2.17
GABRB3-223ENST00000637293 INO80Q9ULG1 1556 aaPredicted RBP1.51□□□□□ -2.17
GABRB3-223ENST00000637293 MAGI3Q5TCQ9 1506 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 UGGT2Q9NYU1 1516 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 LRRC9Q6ZRR7 1453 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 EML5Q05BV3 1969 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 PTPRDP23468 1912 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 TRBV7-3A0A075B6L6 115 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 LOC285095A0A1B0GVY8 99 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 HOXB6P17509 224 aaKnown RBP1.51□□□□□ -2.17
GABRB3-223ENST00000637293 EDDM3BP56851 147 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 ELOF1P60002 83 aaKnown RBP1.51□□□□□ -2.17
GABRB3-223ENST00000637293 UBE2D3P61077 147 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 UBE2D2P62837 147 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 KLKP1Q107X0 134 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 NMSQ5H8A3 153 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 HEPN1Q6WQI6 88 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 SH2D6Q7Z4S9 175 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 VMO1Q7Z5L0 202 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 Q8N6K4 173 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 LINC01600Q96MT4 127 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 LINC00167Q96N53 147 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 ANAPC11Q9NYG5 84 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 MRPL36Q9P0J6 103 aaKnown RBP1.51□□□□□ -2.17
GABRB3-223ENST00000637293 CUL9Q8IWT3 2517 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 PATJQ8NI35 1801 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 LAMB4A4D0S4 1761 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 TET3O43151 1660 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 PCNX2A6NKB5 2137 aa1.51□□□□□ -2.17
GABRB3-223ENST00000637293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.5□□□□□ -2.17
GABRB3-223ENST00000637293 ATRXP46100 2492 aa1.5□□□□□ -2.17
GABRB3-223ENST00000637293 HFM1A2PYH4 1435 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms