RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 C17orf98A8MV24 154 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 DNAH10OSP0CZ25 163 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 DEFA4P12838 97 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 ZNF22P17026 224 aaPredicted RBP1.99□□□□□ -2.09
VIM-210ENST00000637053 GCHFRP30047 84 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 FXYD2P54710 66 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 UBE2D3P61077 147 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 UBE2D2P62837 147 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 RPL36AP83881 106 aaKnown RBP1.99□□□□□ -2.09
VIM-210ENST00000637053 CASC2Q6XLA1 102 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 ZCCHC23Q6ZST2 131 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 ZNF826PQ6ZT77 177 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 MIR7-3HGQ8N6C7 128 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 FAM103A1Q9BTL3 118 aaKnown RBP1.99□□□□□ -2.09
VIM-210ENST00000637053 CDC42SE1Q9NRR8 79 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 PRO1854Q9UHT4 67 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 NEXMIFQ5QGS0 1516 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 RGPD8O14715 1765 aaPredicted RBP1.99□□□□□ -2.09
VIM-210ENST00000637053 RGPD5Q99666 1765 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 SVILO95425 2214 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 ZNF407Q9C0G0 2248 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 THADAQ6YHU6 1953 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 ATP7BP35670 1465 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 PTPRDP23468 1912 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 ZNF142P52746 1687 aaPredicted RBP1.99□□□□□ -2.09
VIM-210ENST00000637053 ARHGAP21Q5T5U3 1957 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 EXPH5Q8NEV8 1989 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 IFT172Q9UG01 1749 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 IGKV1OR2-108A0A075B7D4 117 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 TRBV7-1A0A0A6YYK4 115 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 A0A1B0GWA3 101 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 C2orf70A6NJV1 201 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 A8MUU9 505 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 IQCF6A8MYZ5 107 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 H7C2G1 150 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 IGKV3-20P01619 116 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 IL4P05112 153 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 HMGN2P05204 90 aaKnown RBP1.98□□□□□ -2.09
VIM-210ENST00000637053 IGHV4-34P06331 123 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 PRB4P10163 310 aaPredicted RBP1.98□□□□□ -2.09
VIM-210ENST00000637053 NNATQ16517 81 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 FAM27BQ5VT28 67 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 Q8N377 158 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 TOMM5Q8N4H5 51 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 C14orf178Q8N769 122 aaPredicted RBP1.98□□□□□ -2.09
VIM-210ENST00000637053 KLHL30-AS1Q8NEE0 82 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 LINC01560Q8TB33 94 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 FAM167A-AS1Q96KT0 104 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 DEFB126Q9BYW3 111 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 ZNF355PQ9NSJ1 428 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 ZNRD1Q9P1U0 126 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 TIMM9Q9Y5J7 89 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 TDRD6O60522 2096 aaKnown RBP1.98□□□□□ -2.09
VIM-210ENST00000637053 BTAF1O14981 1849 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 ZNF646O15015 1829 aaPredicted RBP1.98□□□□□ -2.09
VIM-210ENST00000637053 CASP8AP2Q9UKL3 1982 aa1.98□□□□□ -2.09
VIM-210ENST00000637053 SIPA1L3O60292 1781 aaPredicted RBP1.98□□□□□ -2.09
VIM-210ENST00000637053 NUMA1Q14980 2115 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 CDC42BPBQ9Y5S2 1711 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 EHBP1L1Q8N3D4 1523 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 CLTCQ00610 1675 aaKnown RBP1.97□□□□□ -2.09
VIM-210ENST00000637053 COL2A1P02458 1487 aaPredicted RBP1.97□□□□□ -2.09
VIM-210ENST00000637053 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.97□□□□□ -2.09
VIM-210ENST00000637053 TRBV7-3A0A075B6L6 115 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 IGKV1D-37A0A075B6S9 117 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 TRAV22A0A0B4J277 110 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 MYMXA0A1B0GTQ4 84 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 FAM223BA6NKX1 122 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 H3BPC8 53 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 LHBP01229 141 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 P0C879 139 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 MGST1P10620 155 aaKnown RBP1.97□□□□□ -2.09
VIM-210ENST00000637053 KRTAP10-3P60369 221 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 C20orf197Q8N268 126 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 Q8N6K4 173 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 C14orf132Q9NPU4 83 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 FAM215AQ9Y5M1 114 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 STRCP1A6NGW2 1772 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 TNS1Q9HBL0 1735 aaKnown RBP1.97□□□□□ -2.09
VIM-210ENST00000637053 PLXNA3P51805 1871 aa1.97□□□□□ -2.09
VIM-210ENST00000637053 MYOM1P52179 1685 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 LAMB1P07942 1786 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 IGKV1D-42A0A075B6H8 117 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 TRBV25-1A0A075B6N4 114 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 A0A087WSZ3 146 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 IGLV3-32A0A0A0MS00 114 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 IGHV3-64DA0A0J9YX35 117 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 E7EUB6 86 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 F8WEM9 126 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 GIG44P09565 113 aaPredicted RBP1.96□□□□□ -2.1
VIM-210ENST00000637053 MIFP14174 115 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 IGLV3-21P80748 117 aaPredicted RBP1.96□□□□□ -2.1
VIM-210ENST00000637053 MOBPQ13875 183 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 LCE3CQ5T5A8 94 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 Q5VV11 94 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 SFTA2Q6UW10 78 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 TMEM105Q8N8V8 129 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 IFI27L1Q96BM0 104 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 C16orf74Q96GX8 76 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 GNG13Q9P2W3 67 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms