RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 RIPPLY3P57055 190 aa11.96□□□□□ -0.5
CHRNA7-221ENST00000636898 SYT8Q8NBV8 401 aa11.96□□□□□ -0.5
CHRNA7-221ENST00000636898 CELSR2Q9HCU4 2923 aa11.96□□□□□ -0.5
CHRNA7-221ENST00000636898 PMVKQ15126 192 aa11.95□□□□□ -0.5
CHRNA7-221ENST00000636898 A0A087WWL8 130 aa11.95□□□□□ -0.5
CHRNA7-221ENST00000636898 SDHAF1A6NFY7 115 aa11.95□□□□□ -0.5
CHRNA7-221ENST00000636898 F5H697 171 aa11.95□□□□□ -0.5
CHRNA7-221ENST00000636898 COX6B1P14854 86 aa11.95□□□□□ -0.5
CHRNA7-221ENST00000636898 FOXI2Q6ZQN5 318 aa11.95□□□□□ -0.5
CHRNA7-221ENST00000636898 RNF152Q8N8N0 203 aa11.95□□□□□ -0.5
CHRNA7-221ENST00000636898 WFDC12Q8WWY7 111 aa11.95□□□□□ -0.5
CHRNA7-221ENST00000636898 ZNF479Q96JC4 524 aa11.95□□□□□ -0.5
CHRNA7-221ENST00000636898 IGLV4-69A0A075B6H9 119 aa11.94□□□□□ -0.5
CHRNA7-221ENST00000636898 A0A096LNT2 108 aa11.94□□□□□ -0.5
CHRNA7-221ENST00000636898 C10orf99Q6UWK7 81 aa11.94□□□□□ -0.5
CHRNA7-221ENST00000636898 CSPG4Q6UVK1 2322 aa11.94□□□□□ -0.5
CHRNA7-221ENST00000636898 IGHV1OR15-1A0A075B7D0 117 aa11.93□□□□□ -0.5
CHRNA7-221ENST00000636898 ZNF815PA8K554 130 aa11.93□□□□□ -0.5
CHRNA7-221ENST00000636898 ELANEP08246 267 aa11.93□□□□□ -0.5
CHRNA7-221ENST00000636898 HERVK_113P61574 105 aa11.93□□□□□ -0.5
CHRNA7-221ENST00000636898 SCGB2A2Q13296 93 aa11.93□□□□□ -0.5
CHRNA7-221ENST00000636898 Q8N1Y9 231 aa11.93□□□□□ -0.5
CHRNA7-221ENST00000636898 MDFICQ9P1T7 246 aa11.93□□□□□ -0.5
CHRNA7-221ENST00000636898 C11orf86A6NJI1 115 aa11.92□□□□□ -0.5
CHRNA7-221ENST00000636898 RRN3P1Q2M238 152 aa11.92□□□□□ -0.5
CHRNA7-221ENST00000636898 VPREB3Q9UKI3 123 aa11.92□□□□□ -0.5
CHRNA7-221ENST00000636898 FLNCQ14315 2725 aa11.92□□□□□ -0.5
CHRNA7-221ENST00000636898 MAP1AP78559 2803 aaPredicted RBP11.92□□□□□ -0.5
CHRNA7-221ENST00000636898 M0QY20 66 aa11.91□□□□□ -0.5
CHRNA7-221ENST00000636898 USP9XQ93008 2570 aaPredicted RBP11.91□□□□□ -0.5
CHRNA7-221ENST00000636898 TRAV12-2A0A075B6T6 113 aa11.91□□□□□ -0.5
CHRNA7-221ENST00000636898 TMEM238LA0A1B0GVL6 79 aa11.91□□□□□ -0.5
CHRNA7-221ENST00000636898 A6NJY4 79 aa11.91□□□□□ -0.5
CHRNA7-221ENST00000636898 F8W1H4 67 aa11.91□□□□□ -0.5
CHRNA7-221ENST00000636898 SYNJ2BPP57105 145 aa11.91□□□□□ -0.5
CHRNA7-221ENST00000636898 RHOHQ15669 191 aa11.91□□□□□ -0.5
CHRNA7-221ENST00000636898 RPL39P62891 51 aaKnown RBP11.9□□□□□ -0.5
CHRNA7-221ENST00000636898 NSUN5P1Q3KNT7 163 aa11.9□□□□□ -0.5
CHRNA7-221ENST00000636898 ZNF876PQ49A33 203 aa11.9□□□□□ -0.5
CHRNA7-221ENST00000636898 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.5
CHRNA7-221ENST00000636898 SCGB1D4Q6XE38 83 aa11.9□□□□□ -0.5
CHRNA7-221ENST00000636898 TRPT1Q86TN4 253 aaKnown RBP11.9□□□□□ -0.5
CHRNA7-221ENST00000636898 NRGNQ92686 78 aa11.9□□□□□ -0.5
CHRNA7-221ENST00000636898 UBE2E2Q96LR5 201 aa11.9□□□□□ -0.5
CHRNA7-221ENST00000636898 CACNA1AO00555 2505 aa11.9□□□□□ -0.5
CHRNA7-221ENST00000636898 IGKV3-20P01619 116 aa11.9□□□□□ -0.51
CHRNA7-221ENST00000636898 COTL1Q14019 142 aa11.9□□□□□ -0.51
CHRNA7-221ENST00000636898 ZNF56Q15929 161 aa11.9□□□□□ -0.51
CHRNA7-221ENST00000636898 SPINK13Q1W4C9 94 aa11.9□□□□□ -0.51
CHRNA7-221ENST00000636898 CD300EQ496F6 205 aaPredicted RBP11.9□□□□□ -0.51
CHRNA7-221ENST00000636898 HOXA3O43365 443 aaPredicted RBP11.89□□□□□ -0.51
CHRNA7-221ENST00000636898 TGFAP01135 160 aa11.89□□□□□ -0.51
CHRNA7-221ENST00000636898 MORN3Q6PF18 240 aaPredicted RBP11.89□□□□□ -0.51
CHRNA7-221ENST00000636898 ZNF256Q9Y2P7 627 aaPredicted RBP11.89□□□□□ -0.51
CHRNA7-221ENST00000636898 PIEZO1Q92508 2521 aa11.89□□□□□ -0.51
CHRNA7-221ENST00000636898 TRGV11A0A075B6L2 103 aa11.88□□□□□ -0.51
CHRNA7-221ENST00000636898 FSHBP01225 129 aa11.88□□□□□ -0.51
CHRNA7-221ENST00000636898 HOXD3P31249 432 aaPredicted RBP11.88□□□□□ -0.51
CHRNA7-221ENST00000636898 AMTNQ6UX39 209 aa11.88□□□□□ -0.51
CHRNA7-221ENST00000636898 Q6YL49 198 aa11.88□□□□□ -0.51
CHRNA7-221ENST00000636898 ZNF702PQ9H963 129 aa11.88□□□□□ -0.51
CHRNA7-221ENST00000636898 IGSF10Q6WRI0 2623 aa11.88□□□□□ -0.51
CHRNA7-221ENST00000636898 PLEKHB2Q96CS7 222 aa11.87□□□□□ -0.51
CHRNA7-221ENST00000636898 UBE2D1P51668 147 aa11.87□□□□□ -0.51
CHRNA7-221ENST00000636898 NFE4Q86UQ8 179 aa11.87□□□□□ -0.51
CHRNA7-221ENST00000636898 CRYBG3Q68DQ2 2970 aa11.86□□□□□ -0.51
CHRNA7-221ENST00000636898 SRSF9Q13242 221 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHRNA7-221ENST00000636898 KLHL30-AS1Q8NEE0 82 aa11.86□□□□□ -0.51
CHRNA7-221ENST00000636898 ZNRF2Q8NHG8 242 aa11.86□□□□□ -0.51
CHRNA7-221ENST00000636898 EDA2RQ9HAV5 297 aa11.86□□□□□ -0.51
CHRNA7-221ENST00000636898 A0A0J9YY99 117 aa11.85□□□□□ -0.51
CHRNA7-221ENST00000636898 TEX48A0A1B0GUV7 120 aa11.85□□□□□ -0.51
CHRNA7-221ENST00000636898 EMP1P54849 157 aa11.85□□□□□ -0.51
CHRNA7-221ENST00000636898 RPL24P83731 157 aaKnown RBP11.85□□□□□ -0.51
CHRNA7-221ENST00000636898 SPANXB1Q9NS25 103 aaPredicted RBP11.85□□□□□ -0.51
CHRNA7-221ENST00000636898 H3BMG7 143 aa11.85□□□□□ -0.51
CHRNA7-221ENST00000636898 I3L3M4 83 aa11.85□□□□□ -0.51
CHRNA7-221ENST00000636898 TCTEX1D4Q5JR98 221 aa11.84□□□□□ -0.51
CHRNA7-221ENST00000636898 TMEM170BQ5T4T1 132 aa11.84□□□□□ -0.51
CHRNA7-221ENST00000636898 C20orf203Q8NBC4 194 aa11.84□□□□□ -0.51
CHRNA7-221ENST00000636898 A8MTW9 85 aa11.83□□□□□ -0.51
CHRNA7-221ENST00000636898 P0DMU3 169 aa11.83□□□□□ -0.51
CHRNA7-221ENST00000636898 FAM231AP0DMU4 169 aa11.83□□□□□ -0.51
CHRNA7-221ENST00000636898 FAM231CP0DMU5 169 aa11.83□□□□□ -0.51
CHRNA7-221ENST00000636898 DEFB104AQ8WTQ1 72 aa11.83□□□□□ -0.51
CHRNA7-221ENST00000636898 DUX5Q96PT3 197 aa11.83□□□□□ -0.51
CHRNA7-221ENST00000636898 PGPEP1Q9NXJ5 209 aa11.83□□□□□ -0.51
CHRNA7-221ENST00000636898 WFDC2Q14508 124 aa11.83□□□□□ -0.52
CHRNA7-221ENST00000636898 GAGE13Q4V321 117 aa11.83□□□□□ -0.52
CHRNA7-221ENST00000636898 SLC25A29Q8N8R3 303 aa11.83□□□□□ -0.52
CHRNA7-221ENST00000636898 MRPL16Q9NX20 251 aaKnown RBP11.83□□□□□ -0.52
CHRNA7-221ENST00000636898 ANKRD17O75179 2603 aaKnown RBP11.82□□□□□ -0.52
CHRNA7-221ENST00000636898 TRAV2A0A0B4J234 112 aa11.82□□□□□ -0.52
CHRNA7-221ENST00000636898 J3QQQ9 107 aa11.82□□□□□ -0.52
CHRNA7-221ENST00000636898 TSPEAR-AS2P59090 65 aa11.82□□□□□ -0.52
CHRNA7-221ENST00000636898 MAPK1IP1LQ8NDC0 245 aa11.82□□□□□ -0.52
CHRNA7-221ENST00000636898 AMELXQ99217 191 aa11.82□□□□□ -0.52
CHRNA7-221ENST00000636898 PRO0461Q9UI25 63 aa11.82□□□□□ -0.52
CHRNA7-221ENST00000636898 DOPEY2Q9Y3R5 2298 aa11.82□□□□□ -0.52
CHRNA7-221ENST00000636898 USP9YO00507 2555 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms