RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ZNF471Q9BX82 626 aaPredicted RBP12.03□□□□□ -0.48
PNKP-225ENST00000636214 URGCP-MRPS24S4R325 110 aa12.03□□□□□ -0.48
PNKP-225ENST00000636214 S100A9P06702 114 aaKnown RBP12.02□□□□□ -0.49
PNKP-225ENST00000636214 SEC11BP0C7V7 166 aa12.02□□□□□ -0.49
PNKP-225ENST00000636214 CRIP1P50238 77 aa12.02□□□□□ -0.49
PNKP-225ENST00000636214 ZNF674Q2M3X9 581 aa12.02□□□□□ -0.49
PNKP-225ENST00000636214 LINC01559Q495D7 138 aa12.02□□□□□ -0.49
PNKP-225ENST00000636214 Q6ZSN1 163 aa12.02□□□□□ -0.49
PNKP-225ENST00000636214 FRZBQ92765 325 aa12.02□□□□□ -0.49
PNKP-225ENST00000636214 SAMD10Q9BYL1 202 aa12.02□□□□□ -0.49
PNKP-225ENST00000636214 A0A087WWL8 130 aa12.01□□□□□ -0.49
PNKP-225ENST00000636214 TRAV8-3A0A0A6YYJ7 113 aa12.01□□□□□ -0.49
PNKP-225ENST00000636214 A0A0D9SG52 128 aa12.01□□□□□ -0.49
PNKP-225ENST00000636214 A0A1B0GV50 99 aa12.01□□□□□ -0.49
PNKP-225ENST00000636214 KRTAP10-1P60331 282 aa12.01□□□□□ -0.49
PNKP-225ENST00000636214 KCNIP4Q6PIL6 250 aa12.01□□□□□ -0.49
PNKP-225ENST00000636214 C14orf178Q8N769 122 aaPredicted RBP12.01□□□□□ -0.49
PNKP-225ENST00000636214 BCL2L11O43521 198 aa12□□□□□ -0.49
PNKP-225ENST00000636214 LINC00694P0DN24 101 aa12□□□□□ -0.49
PNKP-225ENST00000636214 UFSP1Q6NVU6 142 aa12□□□□□ -0.49
PNKP-225ENST00000636214 SFRP2Q96HF1 295 aa12□□□□□ -0.49
PNKP-225ENST00000636214 LRCOL1A6NCL2 159 aa11.99□□□□□ -0.49
PNKP-225ENST00000636214 HMSDA8MTL9 139 aa11.99□□□□□ -0.49
PNKP-225ENST00000636214 Q8N814 137 aa11.99□□□□□ -0.49
PNKP-225ENST00000636214 RMI2Q96E14 147 aa11.99□□□□□ -0.49
PNKP-225ENST00000636214 H2AFB1P0C5Y9 115 aa11.98□□□□□ -0.49
PNKP-225ENST00000636214 XGP55808 180 aa11.98□□□□□ -0.49
PNKP-225ENST00000636214 RPL36AP83881 106 aaKnown RBP11.98□□□□□ -0.49
PNKP-225ENST00000636214 MBD3L1Q8WWY6 194 aa11.98□□□□□ -0.49
PNKP-225ENST00000636214 RPL36ALQ969Q0 106 aaKnown RBP11.98□□□□□ -0.49
PNKP-225ENST00000636214 COX11Q9Y6N1 276 aa11.98□□□□□ -0.49
PNKP-225ENST00000636214 TRBV10-1A0A0K0K1A3 114 aa11.97□□□□□ -0.49
PNKP-225ENST00000636214 SCO2A0A1W2PP80 73 aa11.97□□□□□ -0.49
PNKP-225ENST00000636214 BAGE2Q86Y30 109 aa11.97□□□□□ -0.49
PNKP-225ENST00000636214 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.97□□□□□ -0.49
PNKP-225ENST00000636214 Q5VSD8 79 aa11.96□□□□□ -0.49
PNKP-225ENST00000636214 DAZ4Q86SG3 579 aaKnown RBP11.96□□□□□ -0.49
PNKP-225ENST00000636214 Q8N3U1 123 aa11.96□□□□□ -0.49
PNKP-225ENST00000636214 DAZ3Q9NR90 486 aaKnown RBP11.96□□□□□ -0.49
PNKP-225ENST00000636214 A0A087WX48 190 aa11.95□□□□□ -0.5
PNKP-225ENST00000636214 ZNF56Q15929 161 aa11.95□□□□□ -0.5
PNKP-225ENST00000636214 PRR27Q6MZM9 219 aa11.95□□□□□ -0.5
PNKP-225ENST00000636214 TMEM70Q9BUB7 260 aa11.95□□□□□ -0.5
PNKP-225ENST00000636214 CXCL1P09341 107 aa11.94□□□□□ -0.5
PNKP-225ENST00000636214 ELOBQ15370 118 aa11.94□□□□□ -0.5
PNKP-225ENST00000636214 SPANXN1Q5VSR9 72 aa11.94□□□□□ -0.5
PNKP-225ENST00000636214 Q9UF83 564 aa11.94□□□□□ -0.5
PNKP-225ENST00000636214 TRBV7-3A0A075B6L6 115 aa11.93□□□□□ -0.5
PNKP-225ENST00000636214 TEX46H3BTG2 121 aa11.93□□□□□ -0.5
PNKP-225ENST00000636214 INAFM2P0DMQ5 153 aa11.93□□□□□ -0.5
PNKP-225ENST00000636214 RPL19P84098 196 aaKnown RBP11.93□□□□□ -0.5
PNKP-225ENST00000636214 NIT1Q86X76 327 aa11.93□□□□□ -0.5
PNKP-225ENST00000636214 CHCHD7Q9BUK0 85 aa11.93□□□□□ -0.5
PNKP-225ENST00000636214 MANBALQ9NQG1 85 aa11.93□□□□□ -0.5
PNKP-225ENST00000636214 FAM229AH3BQW9 127 aa11.92□□□□□ -0.5
PNKP-225ENST00000636214 SMIM17P0DL12 118 aa11.92□□□□□ -0.5
PNKP-225ENST00000636214 RAB4BP61018 213 aa11.92□□□□□ -0.5
PNKP-225ENST00000636214 EIF5AL1Q6IS14 154 aaKnown RBP11.92□□□□□ -0.5
PNKP-225ENST00000636214 TMUB2Q71RG4 321 aa11.92□□□□□ -0.5
PNKP-225ENST00000636214 OR10AG1Q8NH19 301 aa11.92□□□□□ -0.5
PNKP-225ENST00000636214 IGKV2D-24A0A075B6R9 120 aa11.91□□□□□ -0.5
PNKP-225ENST00000636214 F5H697 171 aa11.91□□□□□ -0.5
PNKP-225ENST00000636214 LECT2O14960 151 aa11.91□□□□□ -0.5
PNKP-225ENST00000636214 SMR3BP02814 79 aaPredicted RBP11.91□□□□□ -0.5
PNKP-225ENST00000636214 GNG13Q9P2W3 67 aa11.91□□□□□ -0.5
PNKP-225ENST00000636214 KLK12Q9UKR0 248 aa11.91□□□□□ -0.5
PNKP-225ENST00000636214 TMEM262E9PQX1 116 aa11.9□□□□□ -0.5
PNKP-225ENST00000636214 RPL35P42766 123 aaKnown RBP11.9□□□□□ -0.5
PNKP-225ENST00000636214 RAB5CP51148 216 aa11.9□□□□□ -0.5
PNKP-225ENST00000636214 UBE2D3P61077 147 aa11.9□□□□□ -0.5
PNKP-225ENST00000636214 UBE2D2P62837 147 aa11.9□□□□□ -0.5
PNKP-225ENST00000636214 UBE2WQ96B02 151 aa11.9□□□□□ -0.5
PNKP-225ENST00000636214 DAZAP1Q96EP5 407 aaKnown RBP11.9□□□□□ -0.5
PNKP-225ENST00000636214 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.89□□□□□ -0.51
PNKP-225ENST00000636214 SNAI2O43623 268 aa11.89□□□□□ -0.51
PNKP-225ENST00000636214 OR5AL1P0C617 328 aa11.89□□□□□ -0.51
PNKP-225ENST00000636214 PKIAP61925 76 aa11.89□□□□□ -0.51
PNKP-225ENST00000636214 HAMPP81172 84 aa11.89□□□□□ -0.51
PNKP-225ENST00000636214 OR10G8Q8NGN5 311 aa11.89□□□□□ -0.51
PNKP-225ENST00000636214 MLST8Q9BVC4 326 aa11.89□□□□□ -0.51
PNKP-225ENST00000636214 FAT1Q14517 4588 aa11.88□□□□□ -0.51
PNKP-225ENST00000636214 MUC21A0A0G2JKD1 596 aa11.88□□□□□ -0.51
PNKP-225ENST00000636214 MUC21A0A140T8X8 626 aa11.88□□□□□ -0.51
PNKP-225ENST00000636214 CRPP02741 224 aa11.88□□□□□ -0.51
PNKP-225ENST00000636214 C1QBP02746 253 aa11.88□□□□□ -0.51
PNKP-225ENST00000636214 SSTP61278 116 aa11.88□□□□□ -0.51
PNKP-225ENST00000636214 Q0VG73 95 aa11.88□□□□□ -0.51
PNKP-225ENST00000636214 BAALCQ8WXS3 180 aa11.88□□□□□ -0.51
PNKP-225ENST00000636214 AP1S3Q96PC3 154 aa11.88□□□□□ -0.51
PNKP-225ENST00000636214 DMBT1Q9UGM3 2413 aaPredicted RBP11.88□□□□□ -0.51
PNKP-225ENST00000636214 IFNA1P01562 189 aa11.87□□□□□ -0.51
PNKP-225ENST00000636214 WFDC2Q14508 124 aa11.87□□□□□ -0.51
PNKP-225ENST00000636214 Q8N976 141 aa11.87□□□□□ -0.51
PNKP-225ENST00000636214 NEXN-AS1Q8NBZ9 246 aa11.87□□□□□ -0.51
PNKP-225ENST00000636214 TPPP3Q9BW30 176 aa11.87□□□□□ -0.51
PNKP-225ENST00000636214 TRBV6-8A0A0A6YYG3 113 aa11.86□□□□□ -0.51
PNKP-225ENST00000636214 RBFOX3A6NFN3 312 aa11.86□□□□□ -0.51
PNKP-225ENST00000636214 RPS20P60866 119 aaKnown RBP11.86□□□□□ -0.51
PNKP-225ENST00000636214 TMEM97Q5BJF2 176 aa11.86□□□□□ -0.51
PNKP-225ENST00000636214 C11orf52Q96A22 123 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms