RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 A4D1N5 150 aa11.1□□□□□ -0.63
CACNA1A-220ENST00000635988 F5H697 171 aa11.1□□□□□ -0.63
CACNA1A-220ENST00000635988 KLLNB2CW77 178 aa11.1□□□□□ -0.63
CACNA1A-220ENST00000635988 C9JAW5 83 aa11.1□□□□□ -0.63
CACNA1A-220ENST00000635988 LGALS9O00182 355 aa11.1□□□□□ -0.63
CACNA1A-220ENST00000635988 IGHV3-33P01772 117 aa11.1□□□□□ -0.63
CACNA1A-220ENST00000635988 RNF183Q96D59 192 aa11.1□□□□□ -0.63
CACNA1A-220ENST00000635988 RHOHQ15669 191 aa11.09□□□□□ -0.63
CACNA1A-220ENST00000635988 USMG5Q96IX5 58 aa11.09□□□□□ -0.63
CACNA1A-220ENST00000635988 ANKHD1Q8IWZ3 2542 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-220ENST00000635988 F6UB75 175 aa11.09□□□□□ -0.63
CACNA1A-220ENST00000635988 DEFB1P60022 68 aa11.09□□□□□ -0.63
CACNA1A-220ENST00000635988 TMEM263Q8WUH6 116 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-220ENST00000635988 TMEM223A0PJW6 202 aa11.08□□□□□ -0.64
CACNA1A-220ENST00000635988 BRI3O95415 125 aa11.08□□□□□ -0.64
CACNA1A-220ENST00000635988 TGFAP01135 160 aa11.08□□□□□ -0.64
CACNA1A-220ENST00000635988 NSUN5P1Q3KNT7 163 aa11.08□□□□□ -0.64
CACNA1A-220ENST00000635988 RAX2Q96IS3 184 aa11.08□□□□□ -0.64
CACNA1A-220ENST00000635988 LINC01600Q96MT4 127 aa11.08□□□□□ -0.64
CACNA1A-220ENST00000635988 CITED1Q99966 193 aa11.08□□□□□ -0.64
CACNA1A-220ENST00000635988 A0A0J9YX75 114 aa11.08□□□□□ -0.64
CACNA1A-220ENST00000635988 H3BUA1 57 aa11.08□□□□□ -0.64
CACNA1A-220ENST00000635988 SRD5A1P18405 259 aa11.08□□□□□ -0.64
CACNA1A-220ENST00000635988 ATXN8Q156A1 80 aa11.08□□□□□ -0.64
CACNA1A-220ENST00000635988 TACC2O95359 2948 aa11.07□□□□□ -0.64
CACNA1A-220ENST00000635988 TRBV12-3P01733 135 aa11.07□□□□□ -0.64
CACNA1A-220ENST00000635988 ABCA4P78363 2273 aa11.07□□□□□ -0.64
CACNA1A-220ENST00000635988 A0A087WWL8 130 aa11.06□□□□□ -0.64
CACNA1A-220ENST00000635988 ID1P41134 155 aa11.06□□□□□ -0.64
CACNA1A-220ENST00000635988 GAGE5Q13069 117 aa11.06□□□□□ -0.64
CACNA1A-220ENST00000635988 GAGE6Q13070 117 aa11.06□□□□□ -0.64
CACNA1A-220ENST00000635988 TMEM219Q86XT9 240 aa11.06□□□□□ -0.64
CACNA1A-220ENST00000635988 JPT2Q9H910 190 aa11.06□□□□□ -0.64
CACNA1A-220ENST00000635988 K7ENP7 123 aa11.06□□□□□ -0.64
CACNA1A-220ENST00000635988 SNCGO76070 127 aa11.06□□□□□ -0.64
CACNA1A-220ENST00000635988 RHPN1-AS1Q9BWJ2 59 aa11.06□□□□□ -0.64
CACNA1A-220ENST00000635988 MDFICQ9P1T7 246 aa11.06□□□□□ -0.64
CACNA1A-220ENST00000635988 LINC00527Q9UJ94 153 aa11.06□□□□□ -0.64
CACNA1A-220ENST00000635988 TRAV2A0A0B4J234 112 aa11.05□□□□□ -0.64
CACNA1A-220ENST00000635988 RHODO00212 210 aa11.05□□□□□ -0.64
CACNA1A-220ENST00000635988 GAGE2BQ13066 116 aa11.05□□□□□ -0.64
CACNA1A-220ENST00000635988 GAGE2EQ4V326 116 aa11.05□□□□□ -0.64
CACNA1A-220ENST00000635988 GAGE2DQ9UEU5 116 aa11.05□□□□□ -0.64
CACNA1A-220ENST00000635988 SS18L2Q9UHA2 77 aa11.05□□□□□ -0.64
CACNA1A-220ENST00000635988 PIEZO2Q9H5I5 2752 aa11.05□□□□□ -0.64
CACNA1A-220ENST00000635988 ANKRD11Q6UB99 2663 aaPredicted RBP11.05□□□□□ -0.64
CACNA1A-220ENST00000635988 TRPT1Q86TN4 253 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-220ENST00000635988 MUSTN1Q8IVN3 82 aa11.05□□□□□ -0.64
CACNA1A-220ENST00000635988 ZNF256Q9Y2P7 627 aaPredicted RBP11.05□□□□□ -0.64
CACNA1A-220ENST00000635988 GATA3P23771 443 aa11.04□□□□□ -0.64
CACNA1A-220ENST00000635988 ADORA2A-AS1P86434 159 aa11.04□□□□□ -0.64
CACNA1A-220ENST00000635988 CDSNQ15517 529 aa11.04□□□□□ -0.64
CACNA1A-220ENST00000635988 Q1RN00 199 aa11.04□□□□□ -0.64
CACNA1A-220ENST00000635988 LINC01620Q4KN68 170 aa11.04□□□□□ -0.64
CACNA1A-220ENST00000635988 ZNF22P17026 224 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-220ENST00000635988 RPL13AP40429 203 aaKnown RBP11.04□□□□□ -0.64
CACNA1A-220ENST00000635988 LMO4P61968 165 aa11.04□□□□□ -0.64
CACNA1A-220ENST00000635988 MUC4Q99102 2169 aa11.04□□□□□ -0.64
CACNA1A-220ENST00000635988 TRBV30A0A0K0K1B3 111 aa11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 M0QY20 66 aa11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 M0R2P5 195 aa11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 Q6Q795 121 aa11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 DEFB104AQ8WTQ1 72 aa11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 C9orf85Q96MD7 179 aa11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 DAZ1Q9NQZ3 744 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 IGKV3-7A0A075B6H7 116 aa11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 EIF4EBP3O60516 100 aaPredicted RBP11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 PF4V1P10720 104 aa11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 FAM74A4Q5TZK3 123 aa11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 Q8N1Y9 231 aa11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 C20orf203Q8NBC4 194 aa11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 ODF3Q96PU9 254 aa11.03□□□□□ -0.64
CACNA1A-220ENST00000635988 TRBV10-2A0A0K0K1G8 114 aa11.02□□□□□ -0.64
CACNA1A-220ENST00000635988 H7C2G1 150 aa11.02□□□□□ -0.64
CACNA1A-220ENST00000635988 ZNF56Q15929 161 aa11.02□□□□□ -0.64
CACNA1A-220ENST00000635988 NTN5Q8WTR8 489 aaPredicted RBP11.02□□□□□ -0.64
CACNA1A-220ENST00000635988 TRAV12-3A0A0B4J271 114 aa11.02□□□□□ -0.65
CACNA1A-220ENST00000635988 IGHV3-16A0A0C4DH30 117 aa11.01□□□□□ -0.65
CACNA1A-220ENST00000635988 I3L3M4 83 aa11.01□□□□□ -0.65
CACNA1A-220ENST00000635988 K7EMT4 169 aa11.01□□□□□ -0.65
CACNA1A-220ENST00000635988 IGHV3-11P01762 117 aa11.01□□□□□ -0.65
CACNA1A-220ENST00000635988 BSNQ9UPA5 3926 aa11□□□□□ -0.65
CACNA1A-220ENST00000635988 A0A0J9YXY3 114 aa11□□□□□ -0.65
CACNA1A-220ENST00000635988 OPRPNQ99935 248 aaPredicted RBP11□□□□□ -0.65
CACNA1A-220ENST00000635988 TRAV8-4A0A0B4J246 113 aa11□□□□□ -0.65
CACNA1A-220ENST00000635988 IGHG2P01859 326 aa11□□□□□ -0.65
CACNA1A-220ENST00000635988 NDUFV3P56181 108 aaKnown RBP11□□□□□ -0.65
CACNA1A-220ENST00000635988 TCF15Q12870 199 aa11□□□□□ -0.65
CACNA1A-220ENST00000635988 TTC32Q5I0X7 151 aa11□□□□□ -0.65
CACNA1A-220ENST00000635988 BPESC1Q9GZL8 116 aa11□□□□□ -0.65
CACNA1A-220ENST00000635988 SPANXA1Q9NS26 97 aa10.99□□□□□ -0.65
CACNA1A-220ENST00000635988 IGLV4-3A0A075B6K6 122 aa10.99□□□□□ -0.65
CACNA1A-220ENST00000635988 A0A0J9YXV3 536 aa10.99□□□□□ -0.65
CACNA1A-220ENST00000635988 H3BMM0 161 aa10.98□□□□□ -0.65
CACNA1A-220ENST00000635988 IGHV4-39P01824 125 aa10.98□□□□□ -0.65
CACNA1A-220ENST00000635988 COX6CP09669 75 aa10.98□□□□□ -0.65
CACNA1A-220ENST00000635988 NHLRC4P0CG21 123 aaPredicted RBP10.98□□□□□ -0.65
CACNA1A-220ENST00000635988 IFITM1P13164 125 aa10.98□□□□□ -0.65
CACNA1A-220ENST00000635988 DCANP1Q8TF63 244 aa10.98□□□□□ -0.65
CACNA1A-220ENST00000635988 UBE2WQ96B02 151 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms