RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 A0A096LNI7 61 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 TRAV8-1A0A0A6YYK1 113 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 TRAV5A0A0B4J249 113 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 A0A0J9YX75 114 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 MUC21A0A140T8X8 626 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 TEX50A0A1B0GTY4 177 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 A0A1B0GV50 99 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 A0A1W2PNM2 257 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 IRGMA1A4Y4 181 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 IGKV2-29A2NJV5 120 aaPredicted RBP0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 FUOMA2VDF0 154 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM24AA6NFZ4 105 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 A8MWP4 228 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 FNDC10F2Z333 226 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 G3V2T6 193 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 H3BMM0 161 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 H3BRN7 92 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 H3BUA1 57 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 H3BVH4 76 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 NDUFA4O00483 81 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 UPK2O00526 184 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 GYG2O15488 501 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 SSSCA1O60232 199 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 HPGDSO60760 199 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 ADAP1O75689 374 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 IFNA21P01568 189 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 IFNA17P01571 189 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 TYMSP04818 313 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 HMGN1P05114 100 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 ATP5G1P05496 136 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 CRYGCP07315 174 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 OR5AL1P0C617 328 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 OR4E1P0C645 316 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 C8orf88P0DMB2 117 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 MIFP14174 115 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 MYL12AP19105 171 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 SRMP19623 302 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 OR10J1P30954 320 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 IFNGR2P38484 337 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 HTR2BP41595 481 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 CBX5P45973 191 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 ATP5G3P48201 142 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 KCNJ3P48549 501 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 SERPINB10P48595 397 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 SMIM11AP58511 58 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 TAS2R20P59543 309 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 TAS2R60P59551 318 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 RHOBP62745 196 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 RPL19P84098 196 aaKnown RBP0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 PRCDQ00LT1 54 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 AKR1C1Q04828 323 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 CATR1Q13166 79 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 RRN3P1Q2M238 152 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 KRTAP13-4Q3LI77 160 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 SCGB2B2Q4G0G5 96 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 DNAL1Q4LDG9 190 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM74A4Q5TZK3 123 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 MIC13Q5XKP0 118 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 ELP2Q6IA86 826 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 SFXN4Q6P4A7 337 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 RPL22L1Q6P5R6 122 aaKnown RBP0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 IZUMO2Q6UXV1 221 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 DPPA3Q6W0C5 159 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 ASCL4Q6XD76 172 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 Q6ZSA8 131 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 MIR17HGQ75NE6 70 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 ZFP82Q8N141 532 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 SYS1Q8N2H4 156 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 EXOC3-AS1Q8N2X6 119 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 TTC9CQ8N5M4 171 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 ACBD7Q8N6N7 88 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 Q8N814 137 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 OR10D4PQ8NGN7 298 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 OR1L8Q8NGR8 309 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 OR13C8Q8NGS7 320 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 OR10J5Q8NHC4 309 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 ZFAND1Q8TCF1 268 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 BLNKQ8WV28 456 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 UBE2WQ96B02 151 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 PPP1R14BQ96C90 147 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 GNPNAT1Q96EK6 184 aaPredicted RBP0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 CPNE2Q96FN4 548 aaPredicted RBP0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 ADTRPQ96IZ2 230 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 LINC01587Q99440 93 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 BCL7BQ9BQE9 202 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 C20orf144Q9BQM9 153 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 GINS3Q9BRX5 216 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 PRRG3Q9BZD7 231 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 COMMD5Q9GZQ3 224 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 NXF2Q9GZY0 626 aaKnown RBP0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 SLC25A31Q9H0C2 315 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 EFCAB1Q9HAE3 211 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 VCX3AQ9NNX9 186 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM138Q9NPI0 162 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 IFT46Q9NQC8 304 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 SLC2A9Q9NRM0 540 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 PLEKHJ1Q9NW61 149 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 BET1LQ9NYM9 111 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 MRPL27Q9P0M9 148 aaKnown RBP0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 ABRACLQ9P1F3 81 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms