RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 C11orf21Q9P2W6 132 aa5.36□□□□□ -1.55
BRCA1-230ENST00000634433 ZANQ9Y493 2812 aa5.36□□□□□ -1.55
BRCA1-230ENST00000634433 TRAV2A0A0B4J234 112 aa5.36□□□□□ -1.55
BRCA1-230ENST00000634433 IGHV1-24A0A0C4DH33 117 aa5.36□□□□□ -1.55
BRCA1-230ENST00000634433 MUC21A0A0G2JKD1 596 aa5.36□□□□□ -1.55
BRCA1-230ENST00000634433 MUC21A0A140T8X8 626 aa5.36□□□□□ -1.55
BRCA1-230ENST00000634433 DNAJC9-AS1A6NH13 148 aa5.36□□□□□ -1.55
BRCA1-230ENST00000634433 TSPOP30536 169 aa5.36□□□□□ -1.55
BRCA1-230ENST00000634433 RNASE4P34096 147 aaKnown RBP5.36□□□□□ -1.55
BRCA1-230ENST00000634433 MUC21Q5SSG8 566 aa5.36□□□□□ -1.55
BRCA1-230ENST00000634433 OR1N2Q8NGR9 330 aa5.36□□□□□ -1.55
BRCA1-230ENST00000634433 OR10AG1Q8NH19 301 aa5.36□□□□□ -1.55
BRCA1-230ENST00000634433 SCGB1A1P11684 91 aa5.35□□□□□ -1.55
BRCA1-230ENST00000634433 TCTEX1D4Q5JR98 221 aa5.35□□□□□ -1.55
BRCA1-230ENST00000634433 PRR31Q5SQ13 230 aa5.35□□□□□ -1.55
BRCA1-230ENST00000634433 Q6ZSV7 163 aa5.35□□□□□ -1.55
BRCA1-230ENST00000634433 C20orf144Q9BQM9 153 aa5.35□□□□□ -1.55
BRCA1-230ENST00000634433 KLLNB2CW77 178 aa5.35□□□□□ -1.55
BRCA1-230ENST00000634433 F6UB75 175 aa5.35□□□□□ -1.55
BRCA1-230ENST00000634433 PSMG4Q5JS54 123 aa5.35□□□□□ -1.55
BRCA1-230ENST00000634433 PRR9Q5T870 116 aa5.35□□□□□ -1.55
BRCA1-230ENST00000634433 Q9UF83 564 aa5.35□□□□□ -1.55
BRCA1-230ENST00000634433 CSMD2Q7Z408 3487 aa5.34□□□□□ -1.55
BRCA1-230ENST00000634433 A0A0J9YX75 114 aa5.34□□□□□ -1.55
BRCA1-230ENST00000634433 FAM229AH3BQW9 127 aa5.34□□□□□ -1.55
BRCA1-230ENST00000634433 ZNF688P0C7X2 276 aa5.34□□□□□ -1.55
BRCA1-230ENST00000634433 TFPI2P48307 235 aa5.34□□□□□ -1.55
BRCA1-230ENST00000634433 ANXA2RQ3ZCQ2 193 aa5.34□□□□□ -1.55
BRCA1-230ENST00000634433 FOXI2Q6ZQN5 318 aa5.34□□□□□ -1.55
BRCA1-230ENST00000634433 PRIMA1Q86XR5 153 aa5.34□□□□□ -1.55
BRCA1-230ENST00000634433 Q8N976 141 aa5.34□□□□□ -1.55
BRCA1-230ENST00000634433 ZNF418Q8TF45 676 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-230ENST00000634433 RNF185Q96GF1 192 aa5.34□□□□□ -1.55
BRCA1-230ENST00000634433 NXT2Q9NPJ8 142 aaKnown RBP5.34□□□□□ -1.55
BRCA1-230ENST00000634433 MSRB1Q9NZV6 116 aa5.34□□□□□ -1.55
BRCA1-230ENST00000634433 PHLDA3Q9Y5J5 127 aa5.34□□□□□ -1.55
BRCA1-230ENST00000634433 LOC389332A0A1B0GUA5 103 aa5.34□□□□□ -1.56
BRCA1-230ENST00000634433 H3BVH4 76 aa5.34□□□□□ -1.56
BRCA1-230ENST00000634433 CRXO43186 299 aaPredicted RBP5.34□□□□□ -1.56
BRCA1-230ENST00000634433 IFI27P40305 119 aaPredicted RBP5.34□□□□□ -1.56
BRCA1-230ENST00000634433 SLURP1P55000 103 aa5.34□□□□□ -1.56
BRCA1-230ENST00000634433 KLHL30-AS1Q8NEE0 82 aa5.34□□□□□ -1.56
BRCA1-230ENST00000634433 MRAP2Q96G30 205 aa5.34□□□□□ -1.56
BRCA1-230ENST00000634433 DUX3Q96PT4 197 aa5.34□□□□□ -1.56
BRCA1-230ENST00000634433 C16orf95Q9H693 158 aa5.34□□□□□ -1.56
BRCA1-230ENST00000634433 RNF114Q9Y508 228 aa5.34□□□□□ -1.56
BRCA1-230ENST00000634433 MXRA5Q9NR99 2828 aa5.34□□□□□ -1.56
BRCA1-230ENST00000634433 C7orf71A4D174 169 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 SYS1-DBNDD2H3BUS1 97 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 RHODO00212 210 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 RNASE1P07998 156 aaKnown RBP5.33□□□□□ -1.56
BRCA1-230ENST00000634433 SMAGPQ0VAQ4 97 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 PAPPA-AS1Q5QFB9 102 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 MIEN1Q9BRT3 115 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 PAM16Q9Y3D7 125 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 MTORP42345 2549 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 NPYP01303 97 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 DEFB1P60022 68 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 KRTAP1-1Q07627 177 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 DYNLRB2Q8TF09 96 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 TMEM158Q8WZ71 300 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 SCRT2Q9NQ03 307 aa5.33□□□□□ -1.56
BRCA1-230ENST00000634433 TRAV9-2A0A087WT02 112 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 LINC01546A6NGU7 62 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 SMKR1H3BMG3 65 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 PPP1R17O96001 155 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 HBDP02042 147 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 EVI2AP22794 236 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 SPATA45Q537H7 98 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 MRPL52Q86TS9 123 aaKnown RBP5.32□□□□□ -1.56
BRCA1-230ENST00000634433 DEFB125Q8N687 156 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 OR2K2Q8NGT1 345 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 DPH3P1Q9H4G8 78 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 TIMM8BQ9Y5J9 83 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-230ENST00000634433 LY6G6DO95868 133 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 NCR2O95944 276 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 DEFB136Q30KP8 78 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 TDRG1Q3Y452 100 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 ZNF705AQ6ZN79 300 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-230ENST00000634433 C18orf65Q6ZTR6 163 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 SPATA12Q7Z6I5 190 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 Q8N8P6 123 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 ESM1Q9NQ30 184 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 SELENOKQ9Y6D0 94 aa5.32□□□□□ -1.56
BRCA1-230ENST00000634433 M0R381 172 aa5.31□□□□□ -1.56
BRCA1-230ENST00000634433 GNRH2O43555 120 aa5.31□□□□□ -1.56
BRCA1-230ENST00000634433 SMIM17P0DL12 118 aa5.31□□□□□ -1.56
BRCA1-230ENST00000634433 ADAMTSL5Q6ZMM2 481 aa5.31□□□□□ -1.56
BRCA1-230ENST00000634433 Q6ZQT7 251 aa5.31□□□□□ -1.56
BRCA1-230ENST00000634433 DLX4Q92988 240 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-230ENST00000634433 RNF183Q96D59 192 aa5.31□□□□□ -1.56
BRCA1-230ENST00000634433 AP1S3Q96PC3 154 aa5.31□□□□□ -1.56
BRCA1-230ENST00000634433 ZNF747Q9BV97 191 aa5.31□□□□□ -1.56
BRCA1-230ENST00000634433 UQCR10Q9UDW1 63 aa5.31□□□□□ -1.56
BRCA1-230ENST00000634433 TRAV12-3A0A0B4J271 114 aa5.31□□□□□ -1.56
BRCA1-230ENST00000634433 OR4C46A6NHA9 309 aa5.31□□□□□ -1.56
BRCA1-230ENST00000634433 PLA2G1BP04054 148 aaKnown RBP5.31□□□□□ -1.56
BRCA1-230ENST00000634433 SYT8Q8NBV8 401 aa5.31□□□□□ -1.56
BRCA1-230ENST00000634433 IGHV1OR15-1A0A075B7D0 117 aa5.3□□□□□ -1.56
BRCA1-230ENST00000634433 CRLF1O75462 422 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms