RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 DEFB135Q30KP9 77 aa17.91■□□□□ 0.46
CAPNS1-215ENST00000628018 RASL10AQ92737 203 aa17.91■□□□□ 0.46
CAPNS1-215ENST00000628018 PRELID3AQ96N28 172 aa17.91■□□□□ 0.46
CAPNS1-215ENST00000628018 NDUFAF3Q9BU61 184 aa17.91■□□□□ 0.46
CAPNS1-215ENST00000628018 A0A087WWL8 130 aa17.9■□□□□ 0.46
CAPNS1-215ENST00000628018 SMIM9A6NGZ8 99 aa17.9■□□□□ 0.46
CAPNS1-215ENST00000628018 GAS8-AS1O95177 125 aa17.9■□□□□ 0.46
CAPNS1-215ENST00000628018 NCR2O95944 276 aa17.9■□□□□ 0.46
CAPNS1-215ENST00000628018 IQCJQ1A5X6 159 aa17.9■□□□□ 0.46
CAPNS1-215ENST00000628018 MRAP2Q96G30 205 aa17.9■□□□□ 0.46
CAPNS1-215ENST00000628018 SAMD10Q9BYL1 202 aa17.9■□□□□ 0.46
CAPNS1-215ENST00000628018 MRPL16Q9NX20 251 aaKnown RBP17.9■□□□□ 0.46
CAPNS1-215ENST00000628018 LOC105371267A0A1B0GV96 52 aa17.89■□□□□ 0.45
CAPNS1-215ENST00000628018 KPRPQ5T749 579 aaPredicted RBP17.89■□□□□ 0.45
CAPNS1-215ENST00000628018 Q6ZWC4 215 aa17.89■□□□□ 0.45
CAPNS1-215ENST00000628018 BAGE3Q86Y29 109 aa17.89■□□□□ 0.45
CAPNS1-215ENST00000628018 TRAV26-2A0A0B4J265 109 aa17.88■□□□□ 0.45
CAPNS1-215ENST00000628018 A8MWV9 139 aa17.88■□□□□ 0.45
CAPNS1-215ENST00000628018 MGPP08493 103 aa17.88■□□□□ 0.45
CAPNS1-215ENST00000628018 LINC00310P59036 64 aa17.88■□□□□ 0.45
CAPNS1-215ENST00000628018 OVOL2Q9BRP0 275 aa17.88■□□□□ 0.45
CAPNS1-215ENST00000628018 LGALS9BQ3B8N2 356 aa17.88■□□□□ 0.45
CAPNS1-215ENST00000628018 NPYP01303 97 aa17.87■□□□□ 0.45
CAPNS1-215ENST00000628018 FAM74A4Q5TZK3 123 aa17.87■□□□□ 0.45
CAPNS1-215ENST00000628018 RNF183Q96D59 192 aa17.87■□□□□ 0.45
CAPNS1-215ENST00000628018 NOP10Q9NPE3 64 aaKnown RBP17.87■□□□□ 0.45
CAPNS1-215ENST00000628018 LAMTOR2Q9Y2Q5 125 aa17.87■□□□□ 0.45
CAPNS1-215ENST00000628018 GATA1P15976 413 aaPredicted RBP17.86■□□□□ 0.45
CAPNS1-215ENST00000628018 TRGV1A0A0A0MS02 117 aa17.85■□□□□ 0.45
CAPNS1-215ENST00000628018 NUPR1O60356 82 aa17.85■□□□□ 0.45
CAPNS1-215ENST00000628018 SERF1AO75920 110 aa17.85■□□□□ 0.45
CAPNS1-215ENST00000628018 CFAP126Q5VTH2 177 aa17.85■□□□□ 0.45
CAPNS1-215ENST00000628018 UFSP1Q6NVU6 142 aa17.85■□□□□ 0.45
CAPNS1-215ENST00000628018 HIST3H2BBQ8N257 126 aa17.85■□□□□ 0.45
CAPNS1-215ENST00000628018 NRACQ8N912 160 aa17.85■□□□□ 0.45
CAPNS1-215ENST00000628018 TNFRSF6BO95407 300 aa17.84■□□□□ 0.45
CAPNS1-215ENST00000628018 Q6ZTI0 123 aa17.84■□□□□ 0.45
CAPNS1-215ENST00000628018 OR11H2Q8NH07 326 aa17.84■□□□□ 0.45
CAPNS1-215ENST00000628018 RS1O15537 224 aa17.83■□□□□ 0.45
CAPNS1-215ENST00000628018 ESDP10768 282 aa17.83■□□□□ 0.45
CAPNS1-215ENST00000628018 DNHD1Q96M86 4753 aa17.83■□□□□ 0.44
CAPNS1-215ENST00000628018 SUMO4Q6EEV6 95 aa17.82■□□□□ 0.44
CAPNS1-215ENST00000628018 URB1-AS1Q96HZ7 61 aa17.82■□□□□ 0.44
CAPNS1-215ENST00000628018 F5H697 171 aa17.82■□□□□ 0.44
CAPNS1-215ENST00000628018 PDZD11Q5EBL8 140 aa17.82■□□□□ 0.44
CAPNS1-215ENST00000628018 NIT1Q86X76 327 aa17.82■□□□□ 0.44
CAPNS1-215ENST00000628018 ZNF56Q15929 161 aa17.81■□□□□ 0.44
CAPNS1-215ENST00000628018 IFITM10A6NMD0 228 aa17.8■□□□□ 0.44
CAPNS1-215ENST00000628018 NACAE9PAV3 2078 aa17.8■□□□□ 0.44
CAPNS1-215ENST00000628018 PRSS47A8MTI9 375 aa17.79■□□□□ 0.44
CAPNS1-215ENST00000628018 RHODO00212 210 aa17.79■□□□□ 0.44
CAPNS1-215ENST00000628018 PRB2P02812 416 aaPredicted RBP17.79■□□□□ 0.44
CAPNS1-215ENST00000628018 MIFP14174 115 aa17.79■□□□□ 0.44
CAPNS1-215ENST00000628018 EMP1P54849 157 aa17.79■□□□□ 0.44
CAPNS1-215ENST00000628018 MAP1LC3AQ9H492 121 aa17.79■□□□□ 0.44
CAPNS1-215ENST00000628018 TP53TG1Q9Y2A0 90 aa17.79■□□□□ 0.44
CAPNS1-215ENST00000628018 LOC389332A0A1B0GUA5 103 aa17.78■□□□□ 0.44
CAPNS1-215ENST00000628018 LINC00614P0C842 121 aa17.78■□□□□ 0.44
CAPNS1-215ENST00000628018 ZFP2Q6ZN57 461 aa17.78■□□□□ 0.44
CAPNS1-215ENST00000628018 RPL39LQ96EH5 51 aaKnown RBP17.78■□□□□ 0.44
CAPNS1-215ENST00000628018 NOTCH1P46531 2555 aa17.78■□□□□ 0.44
CAPNS1-215ENST00000628018 IGHV3-73A0A0B4J1V6 119 aa17.77■□□□□ 0.44
CAPNS1-215ENST00000628018 K7EIL1 84 aa17.77■□□□□ 0.44
CAPNS1-215ENST00000628018 M0QY20 66 aa17.77■□□□□ 0.44
CAPNS1-215ENST00000628018 PPP1R17O96001 155 aa17.77■□□□□ 0.44
CAPNS1-215ENST00000628018 IFI27P40305 119 aaPredicted RBP17.77■□□□□ 0.44
CAPNS1-215ENST00000628018 RNASEKQ6P5S7 137 aaKnown RBP17.77■□□□□ 0.44
CAPNS1-215ENST00000628018 Q8NAQ8 132 aa17.77■□□□□ 0.44
CAPNS1-215ENST00000628018 OR4C5Q8NGB2 326 aa17.77■□□□□ 0.44
CAPNS1-215ENST00000628018 PRSS3P2Q8NHM4 247 aa17.77■□□□□ 0.44
CAPNS1-215ENST00000628018 CHCHD1Q96BP2 118 aaKnown RBP17.77■□□□□ 0.44
CAPNS1-215ENST00000628018 EDA2RQ9HAV5 297 aa17.77■□□□□ 0.44
CAPNS1-215ENST00000628018 TRAV4A0A0B4J268 109 aa17.77■□□□□ 0.43
CAPNS1-215ENST00000628018 IGHV4-28A0A0C4DH34 117 aa17.77■□□□□ 0.43
CAPNS1-215ENST00000628018 GAGE12BA1L429 117 aa17.77■□□□□ 0.43
CAPNS1-215ENST00000628018 GAGE7O76087 117 aa17.77■□□□□ 0.43
CAPNS1-215ENST00000628018 GAGE12FP0CL80 117 aa17.77■□□□□ 0.43
CAPNS1-215ENST00000628018 GAGE12GP0CL81 117 aa17.77■□□□□ 0.43
CAPNS1-215ENST00000628018 GAGE12IP0CL82 117 aa17.77■□□□□ 0.43
CAPNS1-215ENST00000628018 S100A2P29034 98 aa17.77■□□□□ 0.43
CAPNS1-215ENST00000628018 NBEAL2Q6ZNJ1 2754 aa17.77■□□□□ 0.43
CAPNS1-215ENST00000628018 NBEAL1Q6ZS30 2694 aa17.77■□□□□ 0.43
CAPNS1-215ENST00000628018 LINC00612Q8N6U2 182 aa17.76■□□□□ 0.43
CAPNS1-215ENST00000628018 C20orf78Q9BR46 151 aa17.76■□□□□ 0.43
CAPNS1-215ENST00000628018 MGAM2Q2M2H8 2515 aa17.76■□□□□ 0.43
CAPNS1-215ENST00000628018 ZNF479Q96JC4 524 aa17.75■□□□□ 0.43
CAPNS1-215ENST00000628018 HIST1H2BLQ99880 126 aa17.75■□□□□ 0.43
CAPNS1-215ENST00000628018 IGLV2-18A0A075B6J9 118 aa17.73■□□□□ 0.43
CAPNS1-215ENST00000628018 TRGV2A0A075B6R0 118 aa17.73■□□□□ 0.43
CAPNS1-215ENST00000628018 HSBP1O75506 76 aa17.73■□□□□ 0.43
CAPNS1-215ENST00000628018 SUMO2P61956 95 aaKnown RBP17.73■□□□□ 0.43
CAPNS1-215ENST00000628018 Q6ZSN1 163 aa17.73■□□□□ 0.43
CAPNS1-215ENST00000628018 FA2HQ7L5A8 372 aa17.73■□□□□ 0.43
CAPNS1-215ENST00000628018 NXT2Q9NPJ8 142 aaKnown RBP17.73■□□□□ 0.43
CAPNS1-215ENST00000628018 LYRM9A8MSI8 78 aa17.72■□□□□ 0.43
CAPNS1-215ENST00000628018 IGHV3-53P01767 116 aa17.72■□□□□ 0.43
CAPNS1-215ENST00000628018 TMEM18Q96B42 140 aa17.72■□□□□ 0.43
CAPNS1-215ENST00000628018 C18orf15Q96N68 181 aa17.72■□□□□ 0.43
CAPNS1-215ENST00000628018 TRBV6-5A0A0K0K1A5 114 aa17.72■□□□□ 0.43
CAPNS1-215ENST00000628018 H7C1H1 209 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms