RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 C2orf88Q9BSF0 95 aa16.22■□□□□ 0.19
PNKP-220ENST00000627232 MCRIP2Q9BUT9 160 aaKnown RBP16.22■□□□□ 0.19
PNKP-220ENST00000627232 ANK3Q12955 4377 aaKnown RBP16.21■□□□□ 0.19
PNKP-220ENST00000627232 SORL1Q92673 2214 aa16.21■□□□□ 0.19
PNKP-220ENST00000627232 ATP5LO75964 103 aa16.21■□□□□ 0.19
PNKP-220ENST00000627232 ORMDL2Q53FV1 153 aa16.21■□□□□ 0.19
PNKP-220ENST00000627232 JPT2Q9H910 190 aa16.21■□□□□ 0.19
PNKP-220ENST00000627232 GOLT1BQ9Y3E0 138 aa16.21■□□□□ 0.19
PNKP-220ENST00000627232 hDV102S1A0JD36 115 aa16.2■□□□□ 0.18
PNKP-220ENST00000627232 SNHG12Q9BXW3 62 aa16.2■□□□□ 0.18
PNKP-220ENST00000627232 TCAPO15273 167 aa16.19■□□□□ 0.18
PNKP-220ENST00000627232 SUMO4Q6EEV6 95 aa16.19■□□□□ 0.18
PNKP-220ENST00000627232 Q6ZN92 141 aa16.19■□□□□ 0.18
PNKP-220ENST00000627232 AKAP9Q99996 3911 aa16.19■□□□□ 0.18
PNKP-220ENST00000627232 OR11H12B2RN74 326 aa16.19■□□□□ 0.18
PNKP-220ENST00000627232 EREGO14944 169 aa16.19■□□□□ 0.18
PNKP-220ENST00000627232 HNRNPA3P51991 378 aaKnown RBP16.19■□□□□ 0.18
PNKP-220ENST00000627232 PMCHL2Q9BQD1 86 aa16.19■□□□□ 0.18
PNKP-220ENST00000627232 FASNP49327 2511 aaKnown RBP16.19■□□□□ 0.18
PNKP-220ENST00000627232 A0A087WWL8 130 aa16.18■□□□□ 0.18
PNKP-220ENST00000627232 INSP01308 110 aa16.18■□□□□ 0.18
PNKP-220ENST00000627232 FOSL1P15407 271 aa16.18■□□□□ 0.18
PNKP-220ENST00000627232 NDUFA11Q86Y39 141 aa16.18■□□□□ 0.18
PNKP-220ENST00000627232 PTH2Q96A98 100 aa16.18■□□□□ 0.18
PNKP-220ENST00000627232 C18orf15Q96N68 181 aa16.18■□□□□ 0.18
PNKP-220ENST00000627232 CRYGDP07320 174 aa16.17■□□□□ 0.18
PNKP-220ENST00000627232 PIK3CD-AS1Q5SR53 167 aa16.17■□□□□ 0.18
PNKP-220ENST00000627232 GCN1Q92616 2671 aaKnown RBP16.17■□□□□ 0.18
PNKP-220ENST00000627232 TRBV6-5A0A0K0K1A5 114 aa16.16■□□□□ 0.18
PNKP-220ENST00000627232 F5H697 171 aa16.16■□□□□ 0.18
PNKP-220ENST00000627232 SAP30O75446 220 aa16.16■□□□□ 0.18
PNKP-220ENST00000627232 NUDT3O95989 172 aa16.16■□□□□ 0.18
PNKP-220ENST00000627232 IGLV1-51P01701 117 aa16.16■□□□□ 0.18
PNKP-220ENST00000627232 ZNF415Q09FC8 603 aa16.16■□□□□ 0.18
PNKP-220ENST00000627232 NSUN5P1Q3KNT7 163 aa16.16■□□□□ 0.18
PNKP-220ENST00000627232 ZNF876PQ49A33 203 aa16.16■□□□□ 0.18
PNKP-220ENST00000627232 STHQ8IWL8 128 aa16.16■□□□□ 0.18
PNKP-220ENST00000627232 MRPS16Q9Y3D3 137 aaKnown RBP16.16■□□□□ 0.18
PNKP-220ENST00000627232 TRPT1Q86TN4 253 aaKnown RBP16.15■□□□□ 0.18
PNKP-220ENST00000627232 FAM110AQ9BQ89 295 aa16.15■□□□□ 0.18
PNKP-220ENST00000627232 CSTL1Q9H114 145 aa16.15■□□□□ 0.18
PNKP-220ENST00000627232 HIVEP2P31629 2446 aa16.15■□□□□ 0.18
PNKP-220ENST00000627232 POLR2KP53803 58 aaKnown RBP16.14■□□□□ 0.18
PNKP-220ENST00000627232 TOMM6Q96B49 74 aa16.14■□□□□ 0.18
PNKP-220ENST00000627232 INAFM1C9JVW0 142 aa16.14■□□□□ 0.17
PNKP-220ENST00000627232 PRSS1P07477 247 aa16.14■□□□□ 0.17
PNKP-220ENST00000627232 FAM74A4Q5TZK3 123 aa16.14■□□□□ 0.17
PNKP-220ENST00000627232 LINC01587Q99440 93 aa16.14■□□□□ 0.17
PNKP-220ENST00000627232 G0S2P27469 103 aa16.13■□□□□ 0.17
PNKP-220ENST00000627232 ODF1Q14990 250 aa16.13■□□□□ 0.17
PNKP-220ENST00000627232 ZNF56Q15929 161 aa16.13■□□□□ 0.17
PNKP-220ENST00000627232 ZMAT4Q9H898 229 aa16.13■□□□□ 0.17
PNKP-220ENST00000627232 LINC01549A6NIU2 74 aa16.12■□□□□ 0.17
PNKP-220ENST00000627232 M0R2P5 195 aa16.12■□□□□ 0.17
PNKP-220ENST00000627232 VCYO14598 125 aa16.12■□□□□ 0.17
PNKP-220ENST00000627232 KRTAP10-3P60369 221 aa16.12■□□□□ 0.17
PNKP-220ENST00000627232 SLC25A34Q6PIV7 304 aa16.12■□□□□ 0.17
PNKP-220ENST00000627232 SPXQ9BT56 116 aa16.12■□□□□ 0.17
PNKP-220ENST00000627232 EDA2RQ9HAV5 297 aa16.12■□□□□ 0.17
PNKP-220ENST00000627232 M0QY20 66 aa16.11■□□□□ 0.17
PNKP-220ENST00000627232 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.1■□□□□ 0.17
PNKP-220ENST00000627232 HTN1P15515 57 aa16.1■□□□□ 0.17
PNKP-220ENST00000627232 NUTF2P61970 127 aaKnown RBP16.1■□□□□ 0.17
PNKP-220ENST00000627232 BEAN1Q3B7T3 259 aa16.1■□□□□ 0.17
PNKP-220ENST00000627232 DKK2Q9UBU2 259 aa16.1■□□□□ 0.17
PNKP-220ENST00000627232 A8MWV9 139 aa16.09■□□□□ 0.17
PNKP-220ENST00000627232 C11orf72Q8NBR9 251 aa16.09■□□□□ 0.17
PNKP-220ENST00000627232 TRBV27A0A0K0K1C4 114 aa16.09■□□□□ 0.17
PNKP-220ENST00000627232 COX8AP10176 69 aa16.09■□□□□ 0.17
PNKP-220ENST00000627232 TRAV12-1A0A0B4J245 112 aa16.08■□□□□ 0.16
PNKP-220ENST00000627232 SDHAF1A6NFY7 115 aa16.08■□□□□ 0.16
PNKP-220ENST00000627232 H7C1H1 209 aa16.08■□□□□ 0.16
PNKP-220ENST00000627232 MORN3Q6PF18 240 aaPredicted RBP16.08■□□□□ 0.16
PNKP-220ENST00000627232 C2orf66Q6UXQ4 117 aa16.08■□□□□ 0.16
PNKP-220ENST00000627232 SCGB3A1Q96QR1 104 aa16.08■□□□□ 0.16
PNKP-220ENST00000627232 KIR2DL4Q99706 377 aa16.08■□□□□ 0.16
PNKP-220ENST00000627232 ANKRD39Q53RE8 183 aa16.07■□□□□ 0.16
PNKP-220ENST00000627232 XCL2Q9UBD3 114 aa16.07■□□□□ 0.16
PNKP-220ENST00000627232 A0A087WX48 190 aa16.06■□□□□ 0.16
PNKP-220ENST00000627232 DPM2O94777 84 aa16.06■□□□□ 0.16
PNKP-220ENST00000627232 IGKCP01834 107 aa16.06■□□□□ 0.16
PNKP-220ENST00000627232 LURAP1LQ8IV03 231 aa16.06■□□□□ 0.16
PNKP-220ENST00000627232 WNK1Q9H4A3 2382 aa16.06■□□□□ 0.16
PNKP-220ENST00000627232 MTORP42345 2549 aa16.06■□□□□ 0.16
PNKP-220ENST00000627232 PF4P02776 101 aa16.05■□□□□ 0.16
PNKP-220ENST00000627232 UFSP1Q6NVU6 142 aa16.05■□□□□ 0.16
PNKP-220ENST00000627232 ZFP2Q6ZN57 461 aa16.05■□□□□ 0.16
PNKP-220ENST00000627232 C1orf158Q8N1D5 194 aa16.05■□□□□ 0.16
PNKP-220ENST00000627232 LINC00482Q8N8I6 264 aa16.05■□□□□ 0.16
PNKP-220ENST00000627232 C19orf73Q9NVV2 129 aa16.05■□□□□ 0.16
PNKP-220ENST00000627232 CYSLTR1Q9Y271 337 aa16.05■□□□□ 0.16
PNKP-220ENST00000627232 HECTD1Q9ULT8 2610 aa16.05■□□□□ 0.16
PNKP-220ENST00000627232 A0A1B0GV90 55 aa16.04■□□□□ 0.16
PNKP-220ENST00000627232 CRLF1O75462 422 aa16.04■□□□□ 0.16
PNKP-220ENST00000627232 RIPPLY3P57055 190 aa16.04■□□□□ 0.16
PNKP-220ENST00000627232 NEGR1Q7Z3B1 354 aa16.04■□□□□ 0.16
PNKP-220ENST00000627232 ERASQ7Z444 233 aa16.04■□□□□ 0.16
PNKP-220ENST00000627232 TMEM208Q9BTX3 173 aa16.04■□□□□ 0.16
PNKP-220ENST00000627232 PRM2P04554 102 aa16.04■□□□□ 0.16
PNKP-220ENST00000627232 STPG4Q8N801 248 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms