RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 A0A087WX48 190 aa12.42□□□□□ -0.42
SMN1-211ENST00000625245 KCNIP4Q6PIL6 250 aa12.42□□□□□ -0.42
SMN1-211ENST00000625245 Q86TA4 180 aa12.42□□□□□ -0.42
SMN1-211ENST00000625245 KRBOX1C9JBD0 128 aa12.41□□□□□ -0.42
SMN1-211ENST00000625245 PEX7O00628 323 aa12.41□□□□□ -0.42
SMN1-211ENST00000625245 ELOBQ15370 118 aa12.41□□□□□ -0.42
SMN1-211ENST00000625245 PHLDA3Q9Y5J5 127 aa12.41□□□□□ -0.42
SMN1-211ENST00000625245 CRIP1P50238 77 aa12.4□□□□□ -0.42
SMN1-211ENST00000625245 CIRBP-AS1Q8TBR5 109 aa12.4□□□□□ -0.42
SMN1-211ENST00000625245 ZC2HC1AQ96GY0 325 aa12.4□□□□□ -0.42
SMN1-211ENST00000625245 TMSB15BA0A087X1C1 80 aa12.39□□□□□ -0.43
SMN1-211ENST00000625245 TMEM262E9PQX1 116 aa12.39□□□□□ -0.43
SMN1-211ENST00000625245 M0R381 172 aa12.39□□□□□ -0.43
SMN1-211ENST00000625245 SH2D1AO60880 128 aa12.39□□□□□ -0.43
SMN1-211ENST00000625245 TPT1P13693 172 aaKnown RBP12.39□□□□□ -0.43
SMN1-211ENST00000625245 DNLZQ5SXM8 178 aa12.39□□□□□ -0.43
SMN1-211ENST00000625245 SFRP2Q96HF1 295 aa12.39□□□□□ -0.43
SMN1-211ENST00000625245 CTXND1A0A1B0GTU2 59 aa12.38□□□□□ -0.43
SMN1-211ENST00000625245 RPL36AP83881 106 aaKnown RBP12.38□□□□□ -0.43
SMN1-211ENST00000625245 ZNF726P1Q15940 193 aa12.38□□□□□ -0.43
SMN1-211ENST00000625245 RPL7L1Q6DKI1 246 aaKnown RBP12.38□□□□□ -0.43
SMN1-211ENST00000625245 RPL36ALQ969Q0 106 aaKnown RBP12.38□□□□□ -0.43
SMN1-211ENST00000625245 HIST1H2BAQ96A08 127 aa12.38□□□□□ -0.43
SMN1-211ENST00000625245 MED28Q9H204 178 aa12.38□□□□□ -0.43
SMN1-211ENST00000625245 A6NHS1 94 aa12.37□□□□□ -0.43
SMN1-211ENST00000625245 FAM74A7A6NL05 159 aa12.37□□□□□ -0.43
SMN1-211ENST00000625245 Q0VG73 95 aa12.37□□□□□ -0.43
SMN1-211ENST00000625245 Q5BKY6 102 aa12.37□□□□□ -0.43
SMN1-211ENST00000625245 FAM162BQ5T6X4 162 aa12.37□□□□□ -0.43
SMN1-211ENST00000625245 SERTAD4-AS1Q5TG53 156 aa12.37□□□□□ -0.43
SMN1-211ENST00000625245 INO80EQ8NBZ0 244 aaPredicted RBP12.37□□□□□ -0.43
SMN1-211ENST00000625245 CHCHD7Q9BUK0 85 aa12.37□□□□□ -0.43
SMN1-211ENST00000625245 BORCS7-ASMTA0A0B4J1R7 106 aa12.36□□□□□ -0.43
SMN1-211ENST00000625245 KRTAP10-4P60372 401 aaPredicted RBP12.36□□□□□ -0.43
SMN1-211ENST00000625245 C1orf43Q9BWL3 253 aa12.36□□□□□ -0.43
SMN1-211ENST00000625245 NKX6-2Q9C056 277 aaPredicted RBP12.36□□□□□ -0.43
SMN1-211ENST00000625245 ZFP30Q9Y2G7 519 aa12.36□□□□□ -0.43
SMN1-211ENST00000625245 LRP1Q07954 4544 aaKnown RBP12.36□□□□□ -0.43
SMN1-211ENST00000625245 TRBV7-3A0A075B6L6 115 aa12.35□□□□□ -0.43
SMN1-211ENST00000625245 TRBV10-1A0A0K0K1A3 114 aa12.35□□□□□ -0.43
SMN1-211ENST00000625245 UBE2D3P61077 147 aa12.35□□□□□ -0.43
SMN1-211ENST00000625245 UBE2G1P62253 170 aa12.35□□□□□ -0.43
SMN1-211ENST00000625245 UBE2D2P62837 147 aa12.35□□□□□ -0.43
SMN1-211ENST00000625245 C14orf177Q52M58 125 aa12.35□□□□□ -0.43
SMN1-211ENST00000625245 ZFP82Q8N141 532 aa12.35□□□□□ -0.43
SMN1-211ENST00000625245 OXTP01178 125 aa12.34□□□□□ -0.43
SMN1-211ENST00000625245 IGLV2-8P01709 118 aa12.34□□□□□ -0.43
SMN1-211ENST00000625245 ATRAIDQ6UW56 229 aa12.34□□□□□ -0.43
SMN1-211ENST00000625245 C15orf54Q8N8G6 183 aa12.34□□□□□ -0.43
SMN1-211ENST00000625245 FMC1Q96HJ9 113 aa12.34□□□□□ -0.43
SMN1-211ENST00000625245 CRPP02741 224 aa12.33□□□□□ -0.44
SMN1-211ENST00000625245 ZNF674Q2M3X9 581 aa12.33□□□□□ -0.44
SMN1-211ENST00000625245 AKR1C8PQ5T2L2 129 aa12.33□□□□□ -0.44
SMN1-211ENST00000625245 COX8CQ7Z4L0 72 aa12.33□□□□□ -0.44
SMN1-211ENST00000625245 FXYD6-FXYD2A0A087WZ82 144 aa12.32□□□□□ -0.44
SMN1-211ENST00000625245 LINC01559Q495D7 138 aa12.32□□□□□ -0.44
SMN1-211ENST00000625245 ENHOQ6UWT2 76 aa12.32□□□□□ -0.44
SMN1-211ENST00000625245 TRBV6-8A0A0A6YYG3 113 aa12.31□□□□□ -0.44
SMN1-211ENST00000625245 ANGP03950 147 aaKnown RBP12.31□□□□□ -0.44
SMN1-211ENST00000625245 CST9LP1Q5W188 147 aa12.31□□□□□ -0.44
SMN1-211ENST00000625245 MAP1LC3B2A6NCE7 125 aa12.3□□□□□ -0.44
SMN1-211ENST00000625245 HLA-DQA1P01909 254 aa12.3□□□□□ -0.44
SMN1-211ENST00000625245 GIPP09681 153 aaPredicted RBP12.3□□□□□ -0.44
SMN1-211ENST00000625245 RAB4BP61018 213 aa12.3□□□□□ -0.44
SMN1-211ENST00000625245 RPL37AP61513 92 aaKnown RBP12.3□□□□□ -0.44
SMN1-211ENST00000625245 ZNF56Q15929 161 aa12.3□□□□□ -0.44
SMN1-211ENST00000625245 MPV17L2Q567V2 206 aa12.3□□□□□ -0.44
SMN1-211ENST00000625245 CHCHD5Q9BSY4 110 aa12.3□□□□□ -0.44
SMN1-211ENST00000625245 MAP1LC3BQ9GZQ8 125 aa12.3□□□□□ -0.44
SMN1-211ENST00000625245 FAT3Q8TDW7 4589 aa12.29□□□□□ -0.44
SMN1-211ENST00000625245 USP17L23D6RBM5 183 aa12.29□□□□□ -0.44
SMN1-211ENST00000625245 LTAP01374 205 aa12.29□□□□□ -0.44
SMN1-211ENST00000625245 AKR1C3P42330 323 aa12.29□□□□□ -0.44
SMN1-211ENST00000625245 OR10G8Q8NGN5 311 aa12.29□□□□□ -0.44
SMN1-211ENST00000625245 PTTG1O95997 202 aa12.28□□□□□ -0.44
SMN1-211ENST00000625245 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.28□□□□□ -0.44
SMN1-211ENST00000625245 NEXN-AS1Q8NBZ9 246 aa12.28□□□□□ -0.44
SMN1-211ENST00000625245 PLA2G2DQ9UNK4 145 aa12.28□□□□□ -0.44
SMN1-211ENST00000625245 TRBV6-1A0A0K0K1D8 114 aa12.27□□□□□ -0.45
SMN1-211ENST00000625245 RPL19P84098 196 aaKnown RBP12.27□□□□□ -0.45
SMN1-211ENST00000625245 OR10AG1Q8NH19 301 aa12.27□□□□□ -0.45
SMN1-211ENST00000625245 STOML3Q8TAV4 291 aa12.27□□□□□ -0.45
SMN1-211ENST00000625245 MUC21A0A0G2JKD1 596 aa12.26□□□□□ -0.45
SMN1-211ENST00000625245 MUC21A0A140T8X8 626 aa12.26□□□□□ -0.45
SMN1-211ENST00000625245 F5H697 171 aa12.26□□□□□ -0.45
SMN1-211ENST00000625245 PRSS1P07477 247 aa12.26□□□□□ -0.45
SMN1-211ENST00000625245 SSTP61278 116 aa12.26□□□□□ -0.45
SMN1-211ENST00000625245 ZNF471Q9BX82 626 aaPredicted RBP12.26□□□□□ -0.45
SMN1-211ENST00000625245 FHITP49789 147 aa12.25□□□□□ -0.45
SMN1-211ENST00000625245 PKIAP61925 76 aa12.25□□□□□ -0.45
SMN1-211ENST00000625245 MIAQ16674 131 aa12.25□□□□□ -0.45
SMN1-211ENST00000625245 CLPSL2Q6UWE3 100 aa12.25□□□□□ -0.45
SMN1-211ENST00000625245 TCEAL7Q9BRU2 100 aa12.25□□□□□ -0.45
SMN1-211ENST00000625245 HMCN2Q8NDA2 5059 aa12.24□□□□□ -0.45
SMN1-211ENST00000625245 PAGE4O60829 102 aa12.24□□□□□ -0.45
SMN1-211ENST00000625245 PRR27Q6MZM9 219 aa12.24□□□□□ -0.45
SMN1-211ENST00000625245 PKHD1L1Q86WI1 4243 aa12.24□□□□□ -0.45
SMN1-211ENST00000625245 HNRNPA3P51991 378 aaKnown RBP12.23□□□□□ -0.45
SMN1-211ENST00000625245 GAGE6Q13070 117 aa12.23□□□□□ -0.45
SMN1-211ENST00000625245 SPANXN1Q5VSR9 72 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms