RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 PRB1P04280 392 aa7.03□□□□□ -1.28
USB1-216ENST00000624720 ATXN8Q156A1 80 aa7.03□□□□□ -1.28
USB1-216ENST00000624720 DEFB121Q5J5C9 76 aa7.03□□□□□ -1.28
USB1-216ENST00000624720 Q6ZRM9 215 aa7.03□□□□□ -1.28
USB1-216ENST00000624720 LEAP2Q969E1 77 aa7.03□□□□□ -1.28
USB1-216ENST00000624720 WI2-2373I1.2A0A1W2PRP0 233 aa7.03□□□□□ -1.28
USB1-216ENST00000624720 USP17L23D6RBM5 183 aa7.03□□□□□ -1.28
USB1-216ENST00000624720 IFI27P40305 119 aaPredicted RBP7.03□□□□□ -1.28
USB1-216ENST00000624720 FGF12P61328 243 aa7.03□□□□□ -1.28
USB1-216ENST00000624720 MOB4Q9Y3A3 225 aa7.03□□□□□ -1.28
USB1-216ENST00000624720 USP24Q9UPU5 2620 aa7.03□□□□□ -1.28
USB1-216ENST00000624720 IGKV1D-13A0A0B4J2D9 117 aa7.02□□□□□ -1.28
USB1-216ENST00000624720 TRBV7-6A0A0J9YX20 115 aa7.02□□□□□ -1.28
USB1-216ENST00000624720 IGKV1-13P0DP09 117 aa7.02□□□□□ -1.28
USB1-216ENST00000624720 RUSC1-AS1Q66K80 236 aa7.02□□□□□ -1.28
USB1-216ENST00000624720 CCL17Q92583 94 aa7.02□□□□□ -1.28
USB1-216ENST00000624720 LINC00474Q9P2X8 69 aa7.02□□□□□ -1.28
USB1-216ENST00000624720 TWIST1Q15672 202 aa7.02□□□□□ -1.29
USB1-216ENST00000624720 FAM223AQ8IWN6 122 aa7.02□□□□□ -1.29
USB1-216ENST00000624720 PLAC8L1A1L4L8 177 aa7.02□□□□□ -1.29
USB1-216ENST00000624720 J3QT63 122 aa7.02□□□□□ -1.29
USB1-216ENST00000624720 SLC50A1Q9BRV3 221 aa7.02□□□□□ -1.29
USB1-216ENST00000624720 CCL28Q9NRJ3 127 aa7.02□□□□□ -1.29
USB1-216ENST00000624720 USP9XQ93008 2570 aaPredicted RBP7.02□□□□□ -1.29
USB1-216ENST00000624720 ARFGEF3Q5TH69 2177 aa7.01□□□□□ -1.29
USB1-216ENST00000624720 WNK2Q9Y3S1 2297 aa7.01□□□□□ -1.29
USB1-216ENST00000624720 IGKV1-6A0A0C4DH72 117 aa7.01□□□□□ -1.29
USB1-216ENST00000624720 MRPS36P82909 103 aaKnown RBP7.01□□□□□ -1.29
USB1-216ENST00000624720 ZNF818PQ6ZRF7 136 aa7.01□□□□□ -1.29
USB1-216ENST00000624720 DCANP1Q8TF63 244 aa7.01□□□□□ -1.29
USB1-216ENST00000624720 C11orf68Q9H3H3 251 aaKnown RBP7.01□□□□□ -1.29
USB1-216ENST00000624720 TRBV7-1A0A0A6YYK4 115 aa7.01□□□□□ -1.29
USB1-216ENST00000624720 CCL24O00175 119 aa7.01□□□□□ -1.29
USB1-216ENST00000624720 SMCR5Q8TEV8 140 aa7.01□□□□□ -1.29
USB1-216ENST00000624720 PGLYRP4Q96LB8 373 aa7.01□□□□□ -1.29
USB1-216ENST00000624720 ZNF714Q96N38 554 aa7.01□□□□□ -1.29
USB1-216ENST00000624720 IQCF6A8MYZ5 107 aa7□□□□□ -1.29
USB1-216ENST00000624720 RNASE6Q93091 150 aaKnown RBP7□□□□□ -1.29
USB1-216ENST00000624720 PRSS1P07477 247 aa7□□□□□ -1.29
USB1-216ENST00000624720 CFHR3Q02985 330 aa7□□□□□ -1.29
USB1-216ENST00000624720 Q8N7P7 452 aa7□□□□□ -1.29
USB1-216ENST00000624720 NUP37Q8NFH4 326 aa7□□□□□ -1.29
USB1-216ENST00000624720 CCL13Q99616 98 aa7□□□□□ -1.29
USB1-216ENST00000624720 ZNRD1Q9P1U0 126 aa7□□□□□ -1.29
USB1-216ENST00000624720 VPS13CQ709C8 3753 aa6.99□□□□□ -1.29
USB1-216ENST00000624720 CELSR1Q9NYQ6 3014 aa6.99□□□□□ -1.29
USB1-216ENST00000624720 HRNRQ86YZ3 2850 aaPredicted RBP6.99□□□□□ -1.29
USB1-216ENST00000624720 IGLV1-44P01699 117 aa6.99□□□□□ -1.29
USB1-216ENST00000624720 RBM3P98179 157 aaKnown RBP6.99□□□□□ -1.29
USB1-216ENST00000624720 CXXC4Q9H2H0 198 aa6.99□□□□□ -1.29
USB1-216ENST00000624720 PRO1854Q9UHT4 67 aa6.99□□□□□ -1.29
USB1-216ENST00000624720 FXYD7P58549 80 aa6.99□□□□□ -1.29
USB1-216ENST00000624720 FAM216BQ8N7L0 139 aa6.99□□□□□ -1.29
USB1-216ENST00000624720 Q9H3A6 140 aa6.99□□□□□ -1.29
USB1-216ENST00000624720 DYNLRB1Q9NP97 96 aa6.99□□□□□ -1.29
USB1-216ENST00000624720 WDR83OSQ9Y284 106 aa6.99□□□□□ -1.29
USB1-216ENST00000624720 LOC389332A0A1B0GUA5 103 aa6.98□□□□□ -1.29
USB1-216ENST00000624720 UNQ9165/PRO28630Q6UXU0 137 aa6.98□□□□□ -1.29
USB1-216ENST00000624720 ZNF492Q9P255 531 aa6.98□□□□□ -1.29
USB1-216ENST00000624720 C8orf87E5RJ46 101 aa6.98□□□□□ -1.29
USB1-216ENST00000624720 GNLYP22749 145 aa6.98□□□□□ -1.29
USB1-216ENST00000624720 C6orf223Q8N319 242 aa6.98□□□□□ -1.29
USB1-216ENST00000624720 TMEM167BQ9NRX6 74 aa6.98□□□□□ -1.29
USB1-216ENST00000624720 KMT2BQ9UMN6 2715 aaPredicted RBP6.98□□□□□ -1.29
USB1-216ENST00000624720 IGHV1-46P01743 117 aa6.98□□□□□ -1.29
USB1-216ENST00000624720 IGHV4-39P01824 125 aa6.98□□□□□ -1.29
USB1-216ENST00000624720 SPINK9Q5DT21 86 aa6.98□□□□□ -1.29
USB1-216ENST00000624720 TM2D3Q9BRN9 247 aa6.98□□□□□ -1.29
USB1-216ENST00000624720 ABCA12Q86UK0 2595 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 ARHGAP32A7KAX9 2087 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 TRBV19A0A075B6N1 114 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 PMS2P5A8MQ11 134 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 CCKP06307 115 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 DAD1P61803 113 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 RHOHQ15669 191 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 MALRD1Q5VYJ5 2156 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 IGKV1D-17A0A075B6S4 117 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 TRAV40A0A0B4J280 105 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 CFC1BP0CG36 223 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 CFC1P0CG37 223 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 PAX8Q06710 450 aa6.97□□□□□ -1.29
USB1-216ENST00000624720 SRRM4A7MD48 611 aaKnown RBP6.96□□□□□ -1.29
USB1-216ENST00000624720 C12orf77C9JDV5 145 aa6.96□□□□□ -1.29
USB1-216ENST00000624720 LGALS3P17931 250 aaKnown RBP6.96□□□□□ -1.29
USB1-216ENST00000624720 BEAN1Q3B7T3 259 aa6.96□□□□□ -1.29
USB1-216ENST00000624720 SCGB1D4Q6XE38 83 aa6.96□□□□□ -1.29
USB1-216ENST00000624720 Q8N8P6 123 aa6.96□□□□□ -1.29
USB1-216ENST00000624720 RPP21Q9H633 154 aaKnown RBP6.96□□□□□ -1.29
USB1-216ENST00000624720 ABCA1O95477 2261 aa6.96□□□□□ -1.29
USB1-216ENST00000624720 IGHV1-58A0A0C4DH39 117 aa6.96□□□□□ -1.3
USB1-216ENST00000624720 E7EQL1 145 aa6.96□□□□□ -1.3
USB1-216ENST00000624720 IGHG2P01859 326 aa6.96□□□□□ -1.3
USB1-216ENST00000624720 S100A7L2Q5SY68 101 aa6.96□□□□□ -1.3
USB1-216ENST00000624720 SDIM1Q6ZPB5 146 aa6.96□□□□□ -1.3
USB1-216ENST00000624720 KTN1-AS1Q86SY8 53 aa6.95□□□□□ -1.3
USB1-216ENST00000624720 PAXXQ9BUH6 204 aa6.95□□□□□ -1.3
USB1-216ENST00000624720 USP9YO00507 2555 aaPredicted RBP6.95□□□□□ -1.3
USB1-216ENST00000624720 LINC01559Q495D7 138 aa6.95□□□□□ -1.3
USB1-216ENST00000624720 PTPN13Q12923 2485 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms