RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 NDUFAF3Q9BU61 184 aa9.68□□□□□ -0.86
C3orf56-201ENST00000624688 SMIM2Q9BVW6 85 aa9.68□□□□□ -0.86
C3orf56-201ENST00000624688 TRAV9-2A0A087WT02 112 aa9.67□□□□□ -0.86
C3orf56-201ENST00000624688 H0Y8G0 127 aa9.67□□□□□ -0.86
C3orf56-201ENST00000624688 CRYGDP07320 174 aa9.67□□□□□ -0.86
C3orf56-201ENST00000624688 SMIM17P0DL12 118 aa9.67□□□□□ -0.86
C3orf56-201ENST00000624688 SUMO2P61956 95 aaKnown RBP9.67□□□□□ -0.86
C3orf56-201ENST00000624688 C20orf202A1L168 122 aa9.66□□□□□ -0.86
C3orf56-201ENST00000624688 TCAPO15273 167 aa9.66□□□□□ -0.86
C3orf56-201ENST00000624688 HTN1P15515 57 aa9.66□□□□□ -0.86
C3orf56-201ENST00000624688 BEAN1Q3B7T3 259 aa9.66□□□□□ -0.86
C3orf56-201ENST00000624688 SUMO4Q6EEV6 95 aa9.66□□□□□ -0.86
C3orf56-201ENST00000624688 STHQ8IWL8 128 aa9.66□□□□□ -0.86
C3orf56-201ENST00000624688 LINC00482Q8N8I6 264 aa9.66□□□□□ -0.86
C3orf56-201ENST00000624688 TMEM158Q8WZ71 300 aa9.66□□□□□ -0.86
C3orf56-201ENST00000624688 C19orf73Q9NVV2 129 aa9.66□□□□□ -0.86
C3orf56-201ENST00000624688 INSP01308 110 aa9.65□□□□□ -0.86
C3orf56-201ENST00000624688 LAGE3Q14657 143 aa9.65□□□□□ -0.86
C3orf56-201ENST00000624688 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
C3orf56-201ENST00000624688 ZNF705AQ6ZN79 300 aaPredicted RBP9.65□□□□□ -0.86
C3orf56-201ENST00000624688 IFI27L1Q96BM0 104 aa9.65□□□□□ -0.86
C3orf56-201ENST00000624688 PMCHL2Q9BQD1 86 aa9.65□□□□□ -0.86
C3orf56-201ENST00000624688 MIEN1Q9BRT3 115 aa9.65□□□□□ -0.86
C3orf56-201ENST00000624688 CMC4P56277 68 aaPredicted RBP9.65□□□□□ -0.87
C3orf56-201ENST00000624688 LINC01587Q99440 93 aa9.65□□□□□ -0.87
C3orf56-201ENST00000624688 FAM110AQ9BQ89 295 aa9.65□□□□□ -0.87
C3orf56-201ENST00000624688 XCL2Q9UBD3 114 aa9.65□□□□□ -0.87
C3orf56-201ENST00000624688 PPP1R17O96001 155 aa9.64□□□□□ -0.87
C3orf56-201ENST00000624688 PF4P02776 101 aa9.64□□□□□ -0.87
C3orf56-201ENST00000624688 IGLL1P15814 213 aa9.64□□□□□ -0.87
C3orf56-201ENST00000624688 FAM74A4Q5TZK3 123 aa9.64□□□□□ -0.87
C3orf56-201ENST00000624688 C1orf158Q8N1D5 194 aa9.64□□□□□ -0.87
C3orf56-201ENST00000624688 C11orf72Q8NBR9 251 aa9.64□□□□□ -0.87
C3orf56-201ENST00000624688 FN1P02751 2386 aaKnown RBP9.64□□□□□ -0.87
C3orf56-201ENST00000624688 WNK1Q9H4A3 2382 aa9.63□□□□□ -0.87
C3orf56-201ENST00000624688 IGLC3P0DOY3 106 aa9.63□□□□□ -0.87
C3orf56-201ENST00000624688 LINC00469Q8N7U9 141 aa9.63□□□□□ -0.87
C3orf56-201ENST00000624688 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.63□□□□□ -0.87
C3orf56-201ENST00000624688 C18orf15Q96N68 181 aa9.63□□□□□ -0.87
C3orf56-201ENST00000624688 WFDC10AQ9H1F0 79 aa9.63□□□□□ -0.87
C3orf56-201ENST00000624688 hDV102S1A0JD36 115 aa9.62□□□□□ -0.87
C3orf56-201ENST00000624688 F5H697 171 aa9.62□□□□□ -0.87
C3orf56-201ENST00000624688 RPL32P62910 135 aaKnown RBP9.62□□□□□ -0.87
C3orf56-201ENST00000624688 ZNF415Q09FC8 603 aa9.62□□□□□ -0.87
C3orf56-201ENST00000624688 LGALS9BQ3B8N2 356 aa9.62□□□□□ -0.87
C3orf56-201ENST00000624688 LBHQ53QV2 105 aaPredicted RBP9.62□□□□□ -0.87
C3orf56-201ENST00000624688 LGALS9CQ6DKI2 356 aa9.62□□□□□ -0.87
C3orf56-201ENST00000624688 MORN3Q6PF18 240 aaPredicted RBP9.62□□□□□ -0.87
C3orf56-201ENST00000624688 CSTL1Q9H114 145 aa9.62□□□□□ -0.87
C3orf56-201ENST00000624688 M0QY20 66 aa9.62□□□□□ -0.87
C3orf56-201ENST00000624688 GIG44P09565 113 aaPredicted RBP9.62□□□□□ -0.87
C3orf56-201ENST00000624688 POLR2KP53803 58 aaKnown RBP9.62□□□□□ -0.87
C3orf56-201ENST00000624688 SPATA3Q8NHX4 192 aa9.62□□□□□ -0.87
C3orf56-201ENST00000624688 PTH2Q96A98 100 aa9.62□□□□□ -0.87
C3orf56-201ENST00000624688 K7EMI3 77 aa9.61□□□□□ -0.87
C3orf56-201ENST00000624688 M0R2P5 195 aa9.61□□□□□ -0.87
C3orf56-201ENST00000624688 AZU1P20160 251 aa9.61□□□□□ -0.87
C3orf56-201ENST00000624688 ZNF56Q15929 161 aa9.61□□□□□ -0.87
C3orf56-201ENST00000624688 UFSP1Q6NVU6 142 aa9.61□□□□□ -0.87
C3orf56-201ENST00000624688 ST20Q9HBF5 79 aa9.61□□□□□ -0.87
C3orf56-201ENST00000624688 SETXQ7Z333 2677 aaKnown RBP9.6□□□□□ -0.87
C3orf56-201ENST00000624688 NOTCH2Q04721 2471 aa9.6□□□□□ -0.87
C3orf56-201ENST00000624688 TRBV6-5A0A0K0K1A5 114 aa9.6□□□□□ -0.87
C3orf56-201ENST00000624688 NUTF2P61970 127 aaKnown RBP9.6□□□□□ -0.87
C3orf56-201ENST00000624688 ORMDL2Q53FV1 153 aa9.6□□□□□ -0.87
C3orf56-201ENST00000624688 PIK3CD-AS1Q5SR53 167 aa9.6□□□□□ -0.87
C3orf56-201ENST00000624688 NEGR1Q7Z3B1 354 aa9.6□□□□□ -0.87
C3orf56-201ENST00000624688 NUDT3O95989 172 aa9.59□□□□□ -0.87
C3orf56-201ENST00000624688 CITED1Q99966 193 aa9.59□□□□□ -0.87
C3orf56-201ENST00000624688 UQCR10Q9UDW1 63 aa9.59□□□□□ -0.87
C3orf56-201ENST00000624688 GOLT1BQ9Y3E0 138 aa9.59□□□□□ -0.87
C3orf56-201ENST00000624688 HIVEP1P15822 2718 aa9.59□□□□□ -0.87
C3orf56-201ENST00000624688 IL17DQ8TAD2 202 aa9.59□□□□□ -0.87
C3orf56-201ENST00000624688 TOMM6Q96B49 74 aa9.59□□□□□ -0.87
C3orf56-201ENST00000624688 SPXQ9BT56 116 aa9.59□□□□□ -0.87
C3orf56-201ENST00000624688 DKK2Q9UBU2 259 aa9.59□□□□□ -0.87
C3orf56-201ENST00000624688 IGHV3OR16-12A0A075B7B8 117 aa9.58□□□□□ -0.88
C3orf56-201ENST00000624688 SDHAF1A6NFY7 115 aa9.58□□□□□ -0.88
C3orf56-201ENST00000624688 ATP5LO75964 103 aa9.58□□□□□ -0.88
C3orf56-201ENST00000624688 ODF1Q14990 250 aa9.58□□□□□ -0.88
C3orf56-201ENST00000624688 TMEM208Q9BTX3 173 aa9.58□□□□□ -0.88
C3orf56-201ENST00000624688 NSD1Q96L73 2696 aaPredicted RBP9.57□□□□□ -0.88
C3orf56-201ENST00000624688 TRBV27A0A0K0K1C4 114 aa9.57□□□□□ -0.88
C3orf56-201ENST00000624688 A8MWV9 139 aa9.57□□□□□ -0.88
C3orf56-201ENST00000624688 VCYO14598 125 aa9.57□□□□□ -0.88
C3orf56-201ENST00000624688 RPL35AP18077 110 aaKnown RBP9.57□□□□□ -0.88
C3orf56-201ENST00000624688 C2orf88Q9BSF0 95 aa9.57□□□□□ -0.88
C3orf56-201ENST00000624688 EDA2RQ9HAV5 297 aa9.57□□□□□ -0.88
C3orf56-201ENST00000624688 MRPL16Q9NX20 251 aaKnown RBP9.57□□□□□ -0.88
C3orf56-201ENST00000624688 IGHV3-73A0A0B4J1V6 119 aa9.56□□□□□ -0.88
C3orf56-201ENST00000624688 EREGO14944 169 aa9.56□□□□□ -0.88
C3orf56-201ENST00000624688 PRSS1P07477 247 aa9.56□□□□□ -0.88
C3orf56-201ENST00000624688 CFAP126Q5VTH2 177 aa9.56□□□□□ -0.88
C3orf56-201ENST00000624688 C2orf66Q6UXQ4 117 aa9.56□□□□□ -0.88
C3orf56-201ENST00000624688 RNASE8Q8TDE3 154 aaKnown RBP9.56□□□□□ -0.88
C3orf56-201ENST00000624688 SNHG12Q9BXW3 62 aa9.56□□□□□ -0.88
C3orf56-201ENST00000624688 ZMAT4Q9H898 229 aa9.56□□□□□ -0.88
C3orf56-201ENST00000624688 HSBP1L1C9JCN9 74 aa9.56□□□□□ -0.88
C3orf56-201ENST00000624688 ZFP2Q6ZN57 461 aa9.56□□□□□ -0.88
C3orf56-201ENST00000624688 Q6ZN92 141 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms