RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 EPG5Q9HCE0 2579 aa10.62□□□□□ -0.71
LDB3-209ENST00000623056 J3QQQ9 107 aa10.62□□□□□ -0.71
LDB3-209ENST00000623056 M0QXV9 152 aa10.62□□□□□ -0.71
LDB3-209ENST00000623056 EIF4EBP3O60516 100 aaPredicted RBP10.62□□□□□ -0.71
LDB3-209ENST00000623056 LINC00315P59091 139 aa10.62□□□□□ -0.71
LDB3-209ENST00000623056 C1orf122Q6ZSJ8 110 aa10.62□□□□□ -0.71
LDB3-209ENST00000623056 TMEM141Q96I45 108 aa10.62□□□□□ -0.71
LDB3-209ENST00000623056 A4D1N5 150 aa10.62□□□□□ -0.71
LDB3-209ENST00000623056 NHLRC4P0CG21 123 aaPredicted RBP10.62□□□□□ -0.71
LDB3-209ENST00000623056 SRD5A1P18405 259 aa10.62□□□□□ -0.71
LDB3-209ENST00000623056 RPL32P62910 135 aaKnown RBP10.62□□□□□ -0.71
LDB3-209ENST00000623056 OVOL1O14753 267 aa10.61□□□□□ -0.71
LDB3-209ENST00000623056 LGALS3P17931 250 aaKnown RBP10.61□□□□□ -0.71
LDB3-209ENST00000623056 POLR2KP53803 58 aaKnown RBP10.61□□□□□ -0.71
LDB3-209ENST00000623056 TIMM17AQ99595 171 aa10.61□□□□□ -0.71
LDB3-209ENST00000623056 KIF25-AS1Q9Y6Z4 181 aa10.61□□□□□ -0.71
LDB3-209ENST00000623056 MUC4Q99102 2169 aa10.61□□□□□ -0.71
LDB3-209ENST00000623056 IGHV4OR15-8A0A075B7B6 117 aa10.61□□□□□ -0.71
LDB3-209ENST00000623056 A0A087WW49 117 aa10.61□□□□□ -0.71
LDB3-209ENST00000623056 IGHV3-33P01772 117 aa10.61□□□□□ -0.71
LDB3-209ENST00000623056 ZNF876PQ49A33 203 aa10.61□□□□□ -0.71
LDB3-209ENST00000623056 B5MCH6 92 aa10.6□□□□□ -0.71
LDB3-209ENST00000623056 RHODO00212 210 aa10.6□□□□□ -0.71
LDB3-209ENST00000623056 ZFP36P26651 326 aaKnown RBP10.6□□□□□ -0.71
LDB3-209ENST00000623056 GRNP28799 593 aaKnown RBP10.6□□□□□ -0.71
LDB3-209ENST00000623056 TMEM263Q8WUH6 116 aaKnown RBP10.6□□□□□ -0.71
LDB3-209ENST00000623056 H7C2G1 150 aa10.59□□□□□ -0.71
LDB3-209ENST00000623056 NXPH4O95158 308 aa10.59□□□□□ -0.71
LDB3-209ENST00000623056 SUMO4Q6EEV6 95 aa10.59□□□□□ -0.71
LDB3-209ENST00000623056 FAM19A4Q96LR4 140 aa10.59□□□□□ -0.71
LDB3-209ENST00000623056 MED13LQ71F56 2210 aa10.59□□□□□ -0.71
LDB3-209ENST00000623056 F6UB75 175 aa10.59□□□□□ -0.71
LDB3-209ENST00000623056 SOCS3O14543 225 aa10.59□□□□□ -0.71
LDB3-209ENST00000623056 VCYO14598 125 aa10.59□□□□□ -0.71
LDB3-209ENST00000623056 GAGE2BQ13066 116 aa10.59□□□□□ -0.71
LDB3-209ENST00000623056 GAGE2EQ4V326 116 aa10.59□□□□□ -0.71
LDB3-209ENST00000623056 JPT2Q9H910 190 aa10.59□□□□□ -0.71
LDB3-209ENST00000623056 GAGE2DQ9UEU5 116 aa10.59□□□□□ -0.71
LDB3-209ENST00000623056 TRAV4A0A0B4J268 109 aa10.58□□□□□ -0.72
LDB3-209ENST00000623056 SNCGO76070 127 aa10.58□□□□□ -0.72
LDB3-209ENST00000623056 P0DMU3 169 aa10.58□□□□□ -0.72
LDB3-209ENST00000623056 FAM231AP0DMU4 169 aa10.58□□□□□ -0.72
LDB3-209ENST00000623056 FAM231CP0DMU5 169 aa10.58□□□□□ -0.72
LDB3-209ENST00000623056 SIRPDQ9H106 197 aa10.58□□□□□ -0.72
LDB3-209ENST00000623056 NBASA2RRP1 2371 aa10.58□□□□□ -0.72
LDB3-209ENST00000623056 CRLF1O75462 422 aa10.58□□□□□ -0.72
LDB3-209ENST00000623056 UCNP55089 124 aa10.58□□□□□ -0.72
LDB3-209ENST00000623056 NDUFV3P56181 108 aaKnown RBP10.58□□□□□ -0.72
LDB3-209ENST00000623056 Q8N1Y9 231 aa10.58□□□□□ -0.72
LDB3-209ENST00000623056 NTN5Q8WTR8 489 aaPredicted RBP10.58□□□□□ -0.72
LDB3-209ENST00000623056 TRAV2A0A0B4J234 112 aa10.57□□□□□ -0.72
LDB3-209ENST00000623056 A0A0B4J2C4 111 aa10.57□□□□□ -0.72
LDB3-209ENST00000623056 ELANEP08246 267 aa10.57□□□□□ -0.72
LDB3-209ENST00000623056 UNQ9165/PRO28630Q6UXU0 137 aa10.57□□□□□ -0.72
LDB3-209ENST00000623056 APRG1Q8IVJ8 170 aa10.57□□□□□ -0.72
LDB3-209ENST00000623056 SDHAF1A6NFY7 115 aa10.57□□□□□ -0.72
LDB3-209ENST00000623056 MUSTN1Q8IVN3 82 aa10.57□□□□□ -0.72
LDB3-209ENST00000623056 USP24Q9UPU5 2620 aa10.56□□□□□ -0.72
LDB3-209ENST00000623056 A0A087WWL8 130 aa10.56□□□□□ -0.72
LDB3-209ENST00000623056 LEPROTO15243 131 aa10.56□□□□□ -0.72
LDB3-209ENST00000623056 TMEM223A0PJW6 202 aa10.56□□□□□ -0.72
LDB3-209ENST00000623056 F5H697 171 aa10.56□□□□□ -0.72
LDB3-209ENST00000623056 ATXN8Q156A1 80 aa10.56□□□□□ -0.72
LDB3-209ENST00000623056 LINC01620Q4KN68 170 aa10.56□□□□□ -0.72
LDB3-209ENST00000623056 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
LDB3-209ENST00000623056 Q1RN00 199 aa10.55□□□□□ -0.72
LDB3-209ENST00000623056 OPRPNQ99935 248 aaPredicted RBP10.55□□□□□ -0.72
LDB3-209ENST00000623056 ITPR1Q14643 2758 aa10.55□□□□□ -0.72
LDB3-209ENST00000623056 TRBV12-3P01733 135 aa10.55□□□□□ -0.72
LDB3-209ENST00000623056 SAA4P35542 130 aa10.55□□□□□ -0.72
LDB3-209ENST00000623056 LINC00527Q9UJ94 153 aa10.55□□□□□ -0.72
LDB3-209ENST00000623056 IGHV3-64A0A075B6Q5 118 aa10.54□□□□□ -0.72
LDB3-209ENST00000623056 TEX49A0A1B0GTD5 131 aa10.54□□□□□ -0.72
LDB3-209ENST00000623056 IGHV4-39P01824 125 aa10.54□□□□□ -0.72
LDB3-209ENST00000623056 UBE2E1P51965 193 aa10.54□□□□□ -0.72
LDB3-209ENST00000623056 RPL11P62913 178 aaKnown RBP10.54□□□□□ -0.72
LDB3-209ENST00000623056 C5orf56Q8N8D9 126 aa10.54□□□□□ -0.72
LDB3-209ENST00000623056 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 CCDC179H3BU77 68 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 GAGE7O76087 117 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 IFITM1P13164 125 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 KLRB1Q12918 225 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 GAGE4Q13068 117 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 TTC32Q5I0X7 151 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 ODF3Q96PU9 254 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 ZNF256Q9Y2P7 627 aaPredicted RBP10.53□□□□□ -0.72
LDB3-209ENST00000623056 IGKV3-7A0A075B6H7 116 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.53□□□□□ -0.72
LDB3-209ENST00000623056 TRAV41A0A0B4J266 112 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 FAM223BA6NKX1 122 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 RPL13AP40429 203 aaKnown RBP10.53□□□□□ -0.72
LDB3-209ENST00000623056 C11orf71Q6IPW1 123 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 FAM223AQ8IWN6 122 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 LINC01600Q96MT4 127 aa10.53□□□□□ -0.72
LDB3-209ENST00000623056 HRNRQ86YZ3 2850 aaPredicted RBP10.53□□□□□ -0.72
LDB3-209ENST00000623056 TRAV8-4A0A0B4J246 113 aa10.52□□□□□ -0.72
LDB3-209ENST00000623056 TRBV7-9A0A0J9YWB2 115 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms