RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SIVA1O15304 175 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 PF4P02776 101 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 IGLC6P0CF74 106 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 C11orf71Q6IPW1 123 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 CEND1Q8N111 149 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 ERG28Q9UKR5 140 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 TRAV26-1A0A087WT03 109 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 FXYD2P54710 66 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 Q8N976 141 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 H3BMG7 143 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 CRYBA4P53673 196 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 EBI3Q14213 229 aa9.82□□□□□ -0.84
MSH6-215ENST00000622629 JMJD1CQ15652 2540 aa9.82□□□□□ -0.84
MSH6-215ENST00000622629 H3BUA1 57 aa9.82□□□□□ -0.84
MSH6-215ENST00000622629 URB1-AS1Q96HZ7 61 aa9.82□□□□□ -0.84
MSH6-215ENST00000622629 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
MSH6-215ENST00000622629 RAI1Q7Z5J4 1906 aaPredicted RBP9.82□□□□□ -0.84
MSH6-215ENST00000622629 FN1P02751 2386 aaKnown RBP9.82□□□□□ -0.84
MSH6-215ENST00000622629 DLX4Q92988 240 aaPredicted RBP9.82□□□□□ -0.84
MSH6-215ENST00000622629 TMEM101Q96IK0 257 aa9.82□□□□□ -0.84
MSH6-215ENST00000622629 ATP6V0BQ99437 205 aa9.82□□□□□ -0.84
MSH6-215ENST00000622629 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
MSH6-215ENST00000622629 JPT2Q9H910 190 aa9.81□□□□□ -0.84
MSH6-215ENST00000622629 MUC3AQ02505 3323 aa9.81□□□□□ -0.84
MSH6-215ENST00000622629 A8MWV9 139 aa9.81□□□□□ -0.84
MSH6-215ENST00000622629 IGHG2P01859 326 aa9.81□□□□□ -0.84
MSH6-215ENST00000622629 HOXD3P31249 432 aaPredicted RBP9.81□□□□□ -0.84
MSH6-215ENST00000622629 RNASE13Q5GAN3 156 aaKnown RBP9.81□□□□□ -0.84
MSH6-215ENST00000622629 TRAV8-2A0A0B4J237 113 aa9.81□□□□□ -0.84
MSH6-215ENST00000622629 SAP30O75446 220 aa9.81□□□□□ -0.84
MSH6-215ENST00000622629 PLEKHB2Q96CS7 222 aa9.8□□□□□ -0.84
MSH6-215ENST00000622629 C12orf74Q32Q52 190 aa9.8□□□□□ -0.84
MSH6-215ENST00000622629 NSUN5P1Q3KNT7 163 aa9.8□□□□□ -0.84
MSH6-215ENST00000622629 ZNF625Q96I27 306 aaPredicted RBP9.8□□□□□ -0.84
MSH6-215ENST00000622629 TIMM21Q9BVV7 248 aa9.8□□□□□ -0.84
MSH6-215ENST00000622629 TRAV13-1A0A0B4J241 112 aa9.8□□□□□ -0.84
MSH6-215ENST00000622629 TRGV4A0A0C4DH28 118 aa9.8□□□□□ -0.84
MSH6-215ENST00000622629 GAS8-AS1O95177 125 aa9.8□□□□□ -0.84
MSH6-215ENST00000622629 RPL35AP18077 110 aaKnown RBP9.8□□□□□ -0.84
MSH6-215ENST00000622629 MRGPRG-AS1Q2M3A8 158 aa9.8□□□□□ -0.84
MSH6-215ENST00000622629 Q96MF0 132 aa9.8□□□□□ -0.84
MSH6-215ENST00000622629 MYO15AQ9UKN7 3530 aa9.8□□□□□ -0.84
MSH6-215ENST00000622629 RPL39P62891 51 aaKnown RBP9.79□□□□□ -0.84
MSH6-215ENST00000622629 OR13C6PQ8NH95 151 aa9.79□□□□□ -0.84
MSH6-215ENST00000622629 PRRC2AP48634 2157 aaKnown RBP9.79□□□□□ -0.84
MSH6-215ENST00000622629 I3L3M4 83 aa9.79□□□□□ -0.84
MSH6-215ENST00000622629 INSP01308 110 aa9.79□□□□□ -0.84
MSH6-215ENST00000622629 Q8N6K4 173 aa9.79□□□□□ -0.84
MSH6-215ENST00000622629 TMEM141Q96I45 108 aa9.79□□□□□ -0.84
MSH6-215ENST00000622629 ADARB2-AS1A8MUL3 147 aa9.78□□□□□ -0.84
MSH6-215ENST00000622629 SUMO4Q6EEV6 95 aa9.78□□□□□ -0.84
MSH6-215ENST00000622629 FREM2Q5SZK8 3169 aa9.78□□□□□ -0.84
MSH6-215ENST00000622629 SNCGO76070 127 aa9.78□□□□□ -0.84
MSH6-215ENST00000622629 RPL36AP83881 106 aaKnown RBP9.78□□□□□ -0.84
MSH6-215ENST00000622629 ZNF843Q8N446 348 aa9.78□□□□□ -0.84
MSH6-215ENST00000622629 RPL36ALQ969Q0 106 aaKnown RBP9.78□□□□□ -0.84
MSH6-215ENST00000622629 USP34Q70CQ2 3546 aa9.78□□□□□ -0.84
MSH6-215ENST00000622629 A0A1W2PPR1 153 aa9.78□□□□□ -0.84
MSH6-215ENST00000622629 ELANEP08246 267 aa9.78□□□□□ -0.84
MSH6-215ENST00000622629 HIST2H2BCQ6DN03 193 aa9.78□□□□□ -0.84
MSH6-215ENST00000622629 VPREB3Q9UKI3 123 aa9.78□□□□□ -0.84
MSH6-215ENST00000622629 FRYQ5TBA9 3013 aa9.77□□□□□ -0.84
MSH6-215ENST00000622629 LINC01619G3V211 115 aa9.77□□□□□ -0.85
MSH6-215ENST00000622629 SLURP1P55000 103 aa9.77□□□□□ -0.85
MSH6-215ENST00000622629 C20orf173Q96LM9 149 aa9.77□□□□□ -0.85
MSH6-215ENST00000622629 FLNBO75369 2602 aaKnown RBP9.77□□□□□ -0.85
MSH6-215ENST00000622629 J3QQQ9 107 aa9.77□□□□□ -0.85
MSH6-215ENST00000622629 GATD1Q8NB37 220 aa9.77□□□□□ -0.85
MSH6-215ENST00000622629 Q8N1Y9 231 aa9.77□□□□□ -0.85
MSH6-215ENST00000622629 CHCHD5Q9BSY4 110 aa9.77□□□□□ -0.85
MSH6-215ENST00000622629 C11orf21Q9P2W6 132 aa9.77□□□□□ -0.85
MSH6-215ENST00000622629 Q6ZQT7 251 aa9.76□□□□□ -0.85
MSH6-215ENST00000622629 AKAP13Q12802 2813 aa9.76□□□□□ -0.85
MSH6-215ENST00000622629 MRPS12O15235 138 aaKnown RBP9.76□□□□□ -0.85
MSH6-215ENST00000622629 RNF185Q96GF1 192 aa9.76□□□□□ -0.85
MSH6-215ENST00000622629 ZFP2Q6ZN57 461 aa9.76□□□□□ -0.85
MSH6-215ENST00000622629 IGKV2D-26A0A0A0MRZ7 120 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 M0R2P5 195 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 CFHR3Q02985 330 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 MDFICQ9P1T7 246 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 PTPRBP23467 1997 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.75□□□□□ -0.85
MSH6-215ENST00000622629 A6NDX4 124 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 B5MCH6 92 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 C9JAW5 83 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 LGALS1P09382 135 aaKnown RBP9.75□□□□□ -0.85
MSH6-215ENST00000622629 IGHV4OR15-8A0A075B7B6 117 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 A0A087WW49 117 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 TAL2Q16559 108 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 OXLD1Q5BKU9 147 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 COPS9Q8WXC6 57 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 F8W735 103 aaPredicted RBP9.75□□□□□ -0.85
MSH6-215ENST00000622629 J3QLI3 93 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 APRG1Q8IVJ8 170 aa9.75□□□□□ -0.85
MSH6-215ENST00000622629 HTN3P15516 51 aa9.74□□□□□ -0.85
MSH6-215ENST00000622629 SHISA2Q6UWI4 295 aa9.74□□□□□ -0.85
MSH6-215ENST00000622629 ZNRF2Q8NHG8 242 aa9.74□□□□□ -0.85
MSH6-215ENST00000622629 TSSC4Q9Y5U2 329 aaPredicted RBP9.74□□□□□ -0.85
MSH6-215ENST00000622629 CENPEQ02224 2701 aa9.74□□□□□ -0.85
MSH6-215ENST00000622629 DNAL4O96015 105 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms