RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 C5orf56Q8N8D9 126 aa9.36□□□□□ -0.91
SLC6A6-210ENST00000622186 ALPK2Q86TB3 2170 aa9.36□□□□□ -0.91
SLC6A6-210ENST00000622186 ATOX1O00244 68 aa9.36□□□□□ -0.91
SLC6A6-210ENST00000622186 C16orf54Q6UWD8 224 aa9.36□□□□□ -0.91
SLC6A6-210ENST00000622186 BRK1Q8WUW1 75 aa9.36□□□□□ -0.91
SLC6A6-210ENST00000622186 MARF1Q9Y4F3 1742 aaKnown RBP9.35□□□□□ -0.91
SLC6A6-210ENST00000622186 PIP4P1Q86T03 277 aa9.35□□□□□ -0.91
SLC6A6-210ENST00000622186 ZNF843Q8N446 348 aa9.35□□□□□ -0.91
SLC6A6-210ENST00000622186 ABCA1O95477 2261 aa9.35□□□□□ -0.91
SLC6A6-210ENST00000622186 XGP55808 180 aa9.35□□□□□ -0.91
SLC6A6-210ENST00000622186 ADORA2A-AS1P86434 159 aa9.35□□□□□ -0.91
SLC6A6-210ENST00000622186 MLST8Q9BVC4 326 aa9.35□□□□□ -0.91
SLC6A6-210ENST00000622186 IGLC7A0M8Q6 106 aa9.35□□□□□ -0.91
SLC6A6-210ENST00000622186 SIVA1O15304 175 aa9.35□□□□□ -0.91
SLC6A6-210ENST00000622186 SERTAD4-AS1Q5TG53 156 aa9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 LINC01545Q5VT33 79 aa9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 SS18L2Q9UHA2 77 aa9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 A4D1N5 150 aa9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 COLCA2A8K830 154 aa9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 P0DMU3 169 aa9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 FAM231AP0DMU4 169 aa9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 FAM231CP0DMU5 169 aa9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 WT1P19544 449 aaPredicted RBP9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 DAZAP2Q15038 168 aaPredicted RBP9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 J3QRE1 110 aa9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 LGALS9O00182 355 aa9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 ANKRD36A6QL64 1941 aa9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 KIF13BQ9NQT8 1826 aa9.34□□□□□ -0.91
SLC6A6-210ENST00000622186 WI2-2373I1.2A0A1W2PRP0 233 aa9.33□□□□□ -0.92
SLC6A6-210ENST00000622186 C15orf65H3BRN8 121 aa9.33□□□□□ -0.92
SLC6A6-210ENST00000622186 TRPM3Q9HCF6 1732 aaPredicted RBP9.33□□□□□ -0.92
SLC6A6-210ENST00000622186 FOCADQ5VW36 1801 aa9.33□□□□□ -0.92
SLC6A6-210ENST00000622186 ADAMTSL1Q8N6G6 1762 aa9.33□□□□□ -0.92
SLC6A6-210ENST00000622186 V9GYV3 84 aa9.33□□□□□ -0.92
SLC6A6-210ENST00000622186 LYRM9A8MSI8 78 aa9.33□□□□□ -0.92
SLC6A6-210ENST00000622186 PDE6GP18545 87 aa9.33□□□□□ -0.92
SLC6A6-210ENST00000622186 LINC01548A6NM66 108 aa9.33□□□□□ -0.92
SLC6A6-210ENST00000622186 K7EP13 123 aa9.33□□□□□ -0.92
SLC6A6-210ENST00000622186 QRFPP83859 136 aa9.33□□□□□ -0.92
SLC6A6-210ENST00000622186 MAP6D1Q9H9H5 199 aa9.33□□□□□ -0.92
SLC6A6-210ENST00000622186 PLA2G2AP14555 144 aa9.32□□□□□ -0.92
SLC6A6-210ENST00000622186 SERP2Q8N6R1 65 aa9.32□□□□□ -0.92
SLC6A6-210ENST00000622186 COL18A1P39060 1754 aa9.32□□□□□ -0.92
SLC6A6-210ENST00000622186 RPL39P62891 51 aaKnown RBP9.32□□□□□ -0.92
SLC6A6-210ENST00000622186 Q6ZVH6 145 aa9.32□□□□□ -0.92
SLC6A6-210ENST00000622186 CHCHD10Q8WYQ3 142 aaPredicted RBP9.32□□□□□ -0.92
SLC6A6-210ENST00000622186 SPATA12Q7Z6I5 190 aa9.32□□□□□ -0.92
SLC6A6-210ENST00000622186 POLR3KQ9Y2Y1 108 aaPredicted RBP9.32□□□□□ -0.92
SLC6A6-210ENST00000622186 NACAE9PAV3 2078 aa9.32□□□□□ -0.92
SLC6A6-210ENST00000622186 ARFGEF1Q9Y6D6 1849 aa9.32□□□□□ -0.92
SLC6A6-210ENST00000622186 PLXNA1Q9UIW2 1896 aa9.31□□□□□ -0.92
SLC6A6-210ENST00000622186 FAM186AA6NE01 2351 aa9.31□□□□□ -0.92
SLC6A6-210ENST00000622186 LY6LH3BQJ8 138 aa9.31□□□□□ -0.92
SLC6A6-210ENST00000622186 C20orf144Q9BQM9 153 aa9.31□□□□□ -0.92
SLC6A6-210ENST00000622186 ZNF503-AS2A6NEH8 195 aa9.31□□□□□ -0.92
SLC6A6-210ENST00000622186 FAM236AA0A1B0GUQ0 79 aa9.31□□□□□ -0.92
SLC6A6-210ENST00000622186 FAM236BA0A1B0GV22 79 aa9.31□□□□□ -0.92
SLC6A6-210ENST00000622186 K7EMT4 169 aa9.31□□□□□ -0.92
SLC6A6-210ENST00000622186 CRYGBP07316 175 aa9.31□□□□□ -0.92
SLC6A6-210ENST00000622186 TMEM89A2RUT3 159 aa9.3□□□□□ -0.92
SLC6A6-210ENST00000622186 TCL1BO95988 128 aa9.3□□□□□ -0.92
SLC6A6-210ENST00000622186 SCXQ7RTU7 201 aa9.3□□□□□ -0.92
SLC6A6-210ENST00000622186 NANOS2P60321 138 aaKnown RBP9.3□□□□□ -0.92
SLC6A6-210ENST00000622186 CLEC2BQ92478 149 aa9.3□□□□□ -0.92
SLC6A6-210ENST00000622186 SMR3AQ99954 134 aa9.3□□□□□ -0.92
SLC6A6-210ENST00000622186 LAMB2P55268 1798 aa9.3□□□□□ -0.92
SLC6A6-210ENST00000622186 LRRC75A-AS1Q8N1F1 130 aa9.3□□□□□ -0.92
SLC6A6-210ENST00000622186 DLEC1Q9Y238 1755 aa9.29□□□□□ -0.92
SLC6A6-210ENST00000622186 PLAC8L1A1L4L8 177 aa9.29□□□□□ -0.92
SLC6A6-210ENST00000622186 SMIM9A6NGZ8 99 aa9.29□□□□□ -0.92
SLC6A6-210ENST00000622186 THSD7AQ9UPZ6 1657 aa9.29□□□□□ -0.92
SLC6A6-210ENST00000622186 IGHV1-58A0A0C4DH39 117 aa9.29□□□□□ -0.92
SLC6A6-210ENST00000622186 Q8N9L7 120 aa9.29□□□□□ -0.92
SLC6A6-210ENST00000622186 TRBV6-1A0A0K0K1D8 114 aa9.29□□□□□ -0.92
SLC6A6-210ENST00000622186 B5MCH6 92 aa9.29□□□□□ -0.92
SLC6A6-210ENST00000622186 KIF26BQ2KJY2 2108 aa9.29□□□□□ -0.92
SLC6A6-210ENST00000622186 LOXL1Q08397 574 aaPredicted RBP9.28□□□□□ -0.92
SLC6A6-210ENST00000622186 SYCNQ0VAF6 134 aa9.28□□□□□ -0.92
SLC6A6-210ENST00000622186 CACNA1EQ15878 2313 aa9.28□□□□□ -0.92
SLC6A6-210ENST00000622186 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.28□□□□□ -0.922e-7■■■□□ 18.4
SLC6A6-210ENST00000622186 MYO5AQ9Y4I1 1855 aaKnown RBP9.28□□□□□ -0.92
SLC6A6-210ENST00000622186 TRBV10-1A0A0K0K1A3 114 aa9.28□□□□□ -0.92
SLC6A6-210ENST00000622186 ZFAND2AQ8N6M9 145 aa9.28□□□□□ -0.92
SLC6A6-210ENST00000622186 DYSFO75923 2080 aa9.28□□□□□ -0.92
SLC6A6-210ENST00000622186 SPINK1P00995 79 aa9.28□□□□□ -0.92
SLC6A6-210ENST00000622186 MRPL55Q7Z7F7 128 aaKnown RBP9.28□□□□□ -0.92
SLC6A6-210ENST00000622186 LRRK1Q38SD2 2015 aa9.28□□□□□ -0.92
SLC6A6-210ENST00000622186 OXLD1Q5BKU9 147 aa9.27□□□□□ -0.92
SLC6A6-210ENST00000622186 C1orf158Q8N1D5 194 aa9.27□□□□□ -0.92
SLC6A6-210ENST00000622186 IGKV2-28A0A075B6P5 120 aa9.27□□□□□ -0.93
SLC6A6-210ENST00000622186 IGKV2D-28P01615 120 aa9.27□□□□□ -0.93
SLC6A6-210ENST00000622186 U3KQK5 164 aa9.27□□□□□ -0.93
SLC6A6-210ENST00000622186 Q6ZTI0 123 aa9.27□□□□□ -0.93
SLC6A6-210ENST00000622186 COL4A5P29400 1685 aa9.27□□□□□ -0.93
SLC6A6-210ENST00000622186 IGLV11-55A0A075B6I3 123 aa9.27□□□□□ -0.93
SLC6A6-210ENST00000622186 TRAV23DV6A0A075B6W5 121 aa9.27□□□□□ -0.93
SLC6A6-210ENST00000622186 DEFB1P60022 68 aa9.27□□□□□ -0.93
SLC6A6-210ENST00000622186 U3KQA8 63 aa9.27□□□□□ -0.93
SLC6A6-210ENST00000622186 MIFP14174 115 aa9.26□□□□□ -0.93
SLC6A6-210ENST00000622186 RPL37AP8A6NKH3 93 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms