RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 PACRGQ96M98 296 aaPredicted RBP9.22□□□□□ -0.93
SCAMP1-207ENST00000621999 TMEM191AQ9H0A3 160 aa9.22□□□□□ -0.93
SCAMP1-207ENST00000621999 CHCHD5Q9BSY4 110 aa9.21□□□□□ -0.93
SCAMP1-207ENST00000621999 ADARB2-AS1A8MUL3 147 aa9.21□□□□□ -0.93
SCAMP1-207ENST00000621999 C20orf144Q9BQM9 153 aa9.21□□□□□ -0.93
SCAMP1-207ENST00000621999 C11orf21Q9P2W6 132 aa9.21□□□□□ -0.93
SCAMP1-207ENST00000621999 HSPB8Q9UJY1 196 aa9.21□□□□□ -0.93
SCAMP1-207ENST00000621999 LINC00614P0C842 121 aa9.21□□□□□ -0.94
SCAMP1-207ENST00000621999 PMCHL1Q16048 86 aa9.21□□□□□ -0.94
SCAMP1-207ENST00000621999 ZNRF2Q8NHG8 242 aa9.21□□□□□ -0.94
SCAMP1-207ENST00000621999 TMEM263Q8WUH6 116 aaKnown RBP9.21□□□□□ -0.94
SCAMP1-207ENST00000621999 IGHV3-38A0A0C4DH36 116 aa9.21□□□□□ -0.94
SCAMP1-207ENST00000621999 TNFRSF6BO95407 300 aa9.21□□□□□ -0.94
SCAMP1-207ENST00000621999 ZNF705AQ6ZN79 300 aaPredicted RBP9.21□□□□□ -0.94
SCAMP1-207ENST00000621999 NIT1Q86X76 327 aa9.21□□□□□ -0.94
SCAMP1-207ENST00000621999 NEGR1Q7Z3B1 354 aa9.2□□□□□ -0.94
SCAMP1-207ENST00000621999 KLLNB2CW77 178 aa9.2□□□□□ -0.94
SCAMP1-207ENST00000621999 TCTAP57738 103 aa9.2□□□□□ -0.94
SCAMP1-207ENST00000621999 NXT2Q9NPJ8 142 aaKnown RBP9.2□□□□□ -0.94
SCAMP1-207ENST00000621999 GATA1P15976 413 aaPredicted RBP9.19□□□□□ -0.94
SCAMP1-207ENST00000621999 Q6ZTI0 123 aa9.19□□□□□ -0.94
SCAMP1-207ENST00000621999 TCAPO15273 167 aa9.19□□□□□ -0.94
SCAMP1-207ENST00000621999 UBE2CO00762 179 aa9.19□□□□□ -0.94
SCAMP1-207ENST00000621999 MDFIQ99750 246 aa9.19□□□□□ -0.94
SCAMP1-207ENST00000621999 SCGB3A1Q96QR1 104 aa9.19□□□□□ -0.94
SCAMP1-207ENST00000621999 IFI27P40305 119 aaPredicted RBP9.18□□□□□ -0.94
SCAMP1-207ENST00000621999 CSMD1Q96PZ7 3565 aa9.18□□□□□ -0.94
SCAMP1-207ENST00000621999 PAX4O43316 350 aa9.18□□□□□ -0.94
SCAMP1-207ENST00000621999 VCYO14598 125 aa9.18□□□□□ -0.94
SCAMP1-207ENST00000621999 SMAGPQ0VAQ4 97 aa9.18□□□□□ -0.94
SCAMP1-207ENST00000621999 FAM222AQ5U5X8 452 aa9.18□□□□□ -0.94
SCAMP1-207ENST00000621999 SDHAF1A6NFY7 115 aa9.17□□□□□ -0.94
SCAMP1-207ENST00000621999 PHOX2AO14813 284 aa9.17□□□□□ -0.94
SCAMP1-207ENST00000621999 NIT2Q9NQR4 276 aa9.17□□□□□ -0.94
SCAMP1-207ENST00000621999 CELSR1Q9NYQ6 3014 aa9.17□□□□□ -0.94
SCAMP1-207ENST00000621999 NBPF19A0A087WUL8 3843 aa9.17□□□□□ -0.94
SCAMP1-207ENST00000621999 NPYP01303 97 aa9.17□□□□□ -0.94
SCAMP1-207ENST00000621999 BEAN1Q3B7T3 259 aa9.17□□□□□ -0.94
SCAMP1-207ENST00000621999 MRAP2Q96G30 205 aa9.17□□□□□ -0.94
SCAMP1-207ENST00000621999 SUMO2P61956 95 aaKnown RBP9.17□□□□□ -0.94
SCAMP1-207ENST00000621999 ATP5G1P05496 136 aa9.16□□□□□ -0.94
SCAMP1-207ENST00000621999 TMEM101Q96IK0 257 aa9.16□□□□□ -0.94
SCAMP1-207ENST00000621999 CSMD2Q7Z408 3487 aa9.16□□□□□ -0.94
SCAMP1-207ENST00000621999 A0A087WX48 190 aa9.16□□□□□ -0.94
SCAMP1-207ENST00000621999 RETNQ9HD89 108 aa9.16□□□□□ -0.94
SCAMP1-207ENST00000621999 CTRLP40313 264 aa9.16□□□□□ -0.94
SCAMP1-207ENST00000621999 WFDC9Q8NEX5 89 aa9.15□□□□□ -0.94
SCAMP1-207ENST00000621999 KIR2DL5BA0A0G2JN68 375 aa9.15□□□□□ -0.94
SCAMP1-207ENST00000621999 KIR2DL5BA0A0G2JPC4 375 aa9.15□□□□□ -0.94
SCAMP1-207ENST00000621999 RBMY1BA6NDE4 496 aaKnown RBP9.15□□□□□ -0.94
SCAMP1-207ENST00000621999 RBMY1EA6NEQ0 496 aaKnown RBP9.15□□□□□ -0.94
SCAMP1-207ENST00000621999 RBMY1DP0C7P1 496 aaKnown RBP9.15□□□□□ -0.94
SCAMP1-207ENST00000621999 KIR2DL5AQ8N109 375 aa9.15□□□□□ -0.94
SCAMP1-207ENST00000621999 KIR2DL5BQ8NHK3 375 aa9.15□□□□□ -0.94
SCAMP1-207ENST00000621999 CYSLTR1Q9Y271 337 aa9.15□□□□□ -0.94
SCAMP1-207ENST00000621999 ORMDL2Q53FV1 153 aa9.15□□□□□ -0.94
SCAMP1-207ENST00000621999 UBE2DNLQ8IWF7 75 aa9.15□□□□□ -0.94
SCAMP1-207ENST00000621999 RPL39LQ96EH5 51 aaKnown RBP9.15□□□□□ -0.94
SCAMP1-207ENST00000621999 IGLC6P0CF74 106 aa9.15□□□□□ -0.95
SCAMP1-207ENST00000621999 LAGE3Q14657 143 aa9.15□□□□□ -0.95
SCAMP1-207ENST00000621999 C18orf32Q8TCD1 76 aa9.15□□□□□ -0.95
SCAMP1-207ENST00000621999 ALKBH7Q9BT30 221 aaPredicted RBP9.15□□□□□ -0.95
SCAMP1-207ENST00000621999 SPATA25Q9BR10 227 aa9.14□□□□□ -0.95
SCAMP1-207ENST00000621999 HBDP02042 147 aa9.14□□□□□ -0.95
SCAMP1-207ENST00000621999 IGHV4-28A0A0C4DH34 117 aa9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 SUMO4Q6EEV6 95 aa9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 SMIM9A6NGZ8 99 aa9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 ZNF324O75467 553 aaPredicted RBP9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 RNASE3P12724 160 aaKnown RBP9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 AMTNQ6UX39 209 aa9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 C1orf158Q8N1D5 194 aa9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 OTOGQ6ZRI0 2925 aa9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 RHOHQ15669 191 aa9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 SPATA3Q8NHX4 192 aa9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 PMCHL2Q9BQD1 86 aa9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 GYPEP15421 78 aa9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 LURAP1LQ8IV03 231 aa9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 NBEAL1Q6ZS30 2694 aa9.13□□□□□ -0.95
SCAMP1-207ENST00000621999 MED14OSP0DP75 135 aa9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 PAPPA-AS1Q5QFB9 102 aa9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 ATOH7Q8N100 152 aa9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 C11orf45Q8TAV5 145 aa9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 VAMP8Q9BV40 100 aa9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 HHLA3Q9XRX5 114 aa9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 ZNF479Q96JC4 524 aa9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 MIFP14174 115 aa9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 DEFA6Q01524 100 aa9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 VCX2Q9H322 139 aa9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 GEMIN7Q9H840 131 aaKnown RBP9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 ATP5LO75964 103 aa9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 LAMTOR2Q9Y2Q5 125 aa9.12□□□□□ -0.95
SCAMP1-207ENST00000621999 TSTD3H0UI37 97 aa9.11□□□□□ -0.95
SCAMP1-207ENST00000621999 HOXA5P20719 270 aa9.11□□□□□ -0.95
SCAMP1-207ENST00000621999 TDRG1Q3Y452 100 aa9.11□□□□□ -0.95
SCAMP1-207ENST00000621999 CHCHD1Q96BP2 118 aaKnown RBP9.11□□□□□ -0.95
SCAMP1-207ENST00000621999 I3L3M4 83 aa9.1□□□□□ -0.95
SCAMP1-207ENST00000621999 P0DMU3 169 aa9.1□□□□□ -0.95
SCAMP1-207ENST00000621999 FAM231AP0DMU4 169 aa9.1□□□□□ -0.95
SCAMP1-207ENST00000621999 FAM231CP0DMU5 169 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms