RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 K7EMT4 169 aa13.05□□□□□ -0.32
FAM3A-222ENST00000621967 S100A4P26447 101 aaKnown RBP13.05□□□□□ -0.32
FAM3A-222ENST00000621967 PHLDA3Q9Y5J5 127 aa13.05□□□□□ -0.32
FAM3A-222ENST00000621967 NXPH4O95158 308 aa13.05□□□□□ -0.32
FAM3A-222ENST00000621967 RNASE3P12724 160 aaKnown RBP13.05□□□□□ -0.32
FAM3A-222ENST00000621967 RNASE4P34096 147 aaKnown RBP13.05□□□□□ -0.32
FAM3A-222ENST00000621967 SUMO2P61956 95 aaKnown RBP13.05□□□□□ -0.32
FAM3A-222ENST00000621967 RPL11P62913 178 aaKnown RBP13.05□□□□□ -0.32
FAM3A-222ENST00000621967 ORMDL2Q53FV1 153 aa13.05□□□□□ -0.32
FAM3A-222ENST00000621967 TRAV12-1A0A0B4J245 112 aa13.04□□□□□ -0.32
FAM3A-222ENST00000621967 C10orf99Q6UWK7 81 aa13.04□□□□□ -0.32
FAM3A-222ENST00000621967 GTSCR1Q86UQ5 136 aa13.04□□□□□ -0.32
FAM3A-222ENST00000621967 KLLNB2CW77 178 aa13.03□□□□□ -0.32
FAM3A-222ENST00000621967 KRTAP24-1Q3LI83 254 aa13.03□□□□□ -0.32
FAM3A-222ENST00000621967 UFSP1Q6NVU6 142 aa13.03□□□□□ -0.32
FAM3A-222ENST00000621967 POM121L12Q8N7R1 296 aa13.03□□□□□ -0.32
FAM3A-222ENST00000621967 TTTY13Q9BZ97 58 aa13.03□□□□□ -0.32
FAM3A-222ENST00000621967 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.03□□□□□ -0.32
FAM3A-222ENST00000621967 SPRY2O43597 315 aa13.03□□□□□ -0.32
FAM3A-222ENST00000621967 C14orf178Q8N769 122 aaPredicted RBP13.03□□□□□ -0.32
FAM3A-222ENST00000621967 TOMM6Q96B49 74 aa13.03□□□□□ -0.32
FAM3A-222ENST00000621967 TRBV25-1A0A075B6N4 114 aa13.02□□□□□ -0.32
FAM3A-222ENST00000621967 GNRH2O43555 120 aa13.02□□□□□ -0.32
FAM3A-222ENST00000621967 PLNP26678 52 aa13.02□□□□□ -0.32
FAM3A-222ENST00000621967 PROK1P58294 105 aa13.02□□□□□ -0.32
FAM3A-222ENST00000621967 SAMD13Q5VXD3 122 aa13.02□□□□□ -0.32
FAM3A-222ENST00000621967 DCANP1Q8TF63 244 aa13.02□□□□□ -0.32
FAM3A-222ENST00000621967 AP1S3Q96PC3 154 aa13.02□□□□□ -0.32
FAM3A-222ENST00000621967 CHAC1Q9BUX1 264 aa13.02□□□□□ -0.32
FAM3A-222ENST00000621967 CST9LQ9H4G1 147 aa13.02□□□□□ -0.32
FAM3A-222ENST00000621967 IGKV3-7A0A075B6H7 116 aa13.01□□□□□ -0.33
FAM3A-222ENST00000621967 TMEM89A2RUT3 159 aa13.01□□□□□ -0.33
FAM3A-222ENST00000621967 ELANEP08246 267 aa13.01□□□□□ -0.33
FAM3A-222ENST00000621967 PSMB8P28062 276 aa13.01□□□□□ -0.33
FAM3A-222ENST00000621967 RPL39LQ96EH5 51 aaKnown RBP13.01□□□□□ -0.33
FAM3A-222ENST00000621967 EDN2P20800 178 aa13.01□□□□□ -0.33
FAM3A-222ENST00000621967 CDKN1BP46527 198 aa13.01□□□□□ -0.33
FAM3A-222ENST00000621967 GAGE10A6NGK3 116 aa13□□□□□ -0.33
FAM3A-222ENST00000621967 F8VRH5 84 aa13□□□□□ -0.33
FAM3A-222ENST00000621967 H3BUT2 72 aa13□□□□□ -0.33
FAM3A-222ENST00000621967 KIF25-AS1Q9Y6Z4 181 aa13□□□□□ -0.33
FAM3A-222ENST00000621967 AGRNO00468 2067 aa13□□□□□ -0.33
FAM3A-222ENST00000621967 GAGE12BA1L429 117 aa13□□□□□ -0.33
FAM3A-222ENST00000621967 H7C1H1 209 aa13□□□□□ -0.33
FAM3A-222ENST00000621967 PPP1R17O96001 155 aa13□□□□□ -0.33
FAM3A-222ENST00000621967 ID1P41134 155 aa13□□□□□ -0.33
FAM3A-222ENST00000621967 KHDC1LQ5JSQ8 128 aa13□□□□□ -0.33
FAM3A-222ENST00000621967 GTF2H5Q6ZYL4 71 aa13□□□□□ -0.33
FAM3A-222ENST00000621967 K7EP34 96 aa12.99□□□□□ -0.33
FAM3A-222ENST00000621967 MGPP08493 103 aa12.99□□□□□ -0.33
FAM3A-222ENST00000621967 FXYD2P54710 66 aa12.99□□□□□ -0.33
FAM3A-222ENST00000621967 LINC00315P59091 139 aa12.99□□□□□ -0.33
FAM3A-222ENST00000621967 C11orf44Q8N8P7 122 aa12.99□□□□□ -0.33
FAM3A-222ENST00000621967 NEXN-AS1Q8NBZ9 246 aa12.99□□□□□ -0.33
FAM3A-222ENST00000621967 RNF152Q8N8N0 203 aa12.98□□□□□ -0.33
FAM3A-222ENST00000621967 SCGB3A1Q96QR1 104 aa12.98□□□□□ -0.33
FAM3A-222ENST00000621967 TM2D2Q9BX73 214 aa12.98□□□□□ -0.33
FAM3A-222ENST00000621967 IGHV4OR15-8A0A075B7B6 117 aa12.98□□□□□ -0.33
FAM3A-222ENST00000621967 A0A087WW49 117 aa12.98□□□□□ -0.33
FAM3A-222ENST00000621967 GCSHP23434 173 aa12.98□□□□□ -0.33
FAM3A-222ENST00000621967 RPL32P62910 135 aaKnown RBP12.98□□□□□ -0.33
FAM3A-222ENST00000621967 OCIAD2Q56VL3 154 aa12.98□□□□□ -0.33
FAM3A-222ENST00000621967 A0A1W2PPM0 123 aa12.97□□□□□ -0.33
FAM3A-222ENST00000621967 CD28P10747 220 aa12.97□□□□□ -0.33
FAM3A-222ENST00000621967 MAPKAPK5-AS1Q8N8E1 139 aa12.97□□□□□ -0.33
FAM3A-222ENST00000621967 WFDC12Q8WWY7 111 aa12.97□□□□□ -0.33
FAM3A-222ENST00000621967 ODF3Q96PU9 254 aa12.97□□□□□ -0.33
FAM3A-222ENST00000621967 SELENOKQ9Y6D0 94 aa12.97□□□□□ -0.33
FAM3A-222ENST00000621967 SMIM13P0DJ93 91 aa12.96□□□□□ -0.33
FAM3A-222ENST00000621967 TCTEX1D4Q5JR98 221 aa12.96□□□□□ -0.33
FAM3A-222ENST00000621967 C2orf66Q6UXQ4 117 aa12.96□□□□□ -0.33
FAM3A-222ENST00000621967 RAB37Q96AX2 223 aa12.96□□□□□ -0.33
FAM3A-222ENST00000621967 CHTOPQ9Y3Y2 248 aaKnown RBP12.96□□□□□ -0.33
FAM3A-222ENST00000621967 TAL2Q16559 108 aa12.96□□□□□ -0.34
FAM3A-222ENST00000621967 FAM159AQ6UWV7 190 aa12.96□□□□□ -0.34
FAM3A-222ENST00000621967 CEND1Q8N111 149 aa12.96□□□□□ -0.34
FAM3A-222ENST00000621967 NAA38Q9BRA0 125 aaKnown RBP12.96□□□□□ -0.34
FAM3A-222ENST00000621967 FBN1P35555 2871 aaKnown RBP12.95□□□□□ -0.34
FAM3A-222ENST00000621967 PHLDA1Q8WV24 401 aaPredicted RBP12.95□□□□□ -0.34
FAM3A-222ENST00000621967 BAALCQ8WXS3 180 aa12.95□□□□□ -0.34
FAM3A-222ENST00000621967 UBE2E2Q96LR5 201 aa12.95□□□□□ -0.34
FAM3A-222ENST00000621967 CITED2Q99967 270 aaPredicted RBP12.94□□□□□ -0.34
FAM3A-222ENST00000621967 CSTL1Q9H114 145 aa12.94□□□□□ -0.34
FAM3A-222ENST00000621967 LINC01619G3V211 115 aa12.94□□□□□ -0.34
FAM3A-222ENST00000621967 HIST2H2BDQ6DRA6 164 aa12.94□□□□□ -0.34
FAM3A-222ENST00000621967 TSSC4Q9Y5U2 329 aaPredicted RBP12.94□□□□□ -0.34
FAM3A-222ENST00000621967 OR5A1Q8NGJ0 315 aa12.93□□□□□ -0.34
FAM3A-222ENST00000621967 POLR2KP53803 58 aaKnown RBP12.92□□□□□ -0.34
FAM3A-222ENST00000621967 RIPPLY3P57055 190 aa12.92□□□□□ -0.34
FAM3A-222ENST00000621967 KRTAP10-3P60369 221 aa12.92□□□□□ -0.34
FAM3A-222ENST00000621967 KLHL30-AS1Q8NEE0 82 aa12.92□□□□□ -0.34
FAM3A-222ENST00000621967 A0A0J9YX75 114 aa12.92□□□□□ -0.34
FAM3A-222ENST00000621967 A0A1W2PRX2 142 aa12.92□□□□□ -0.34
FAM3A-222ENST00000621967 SAMD5Q5TGI4 173 aa12.92□□□□□ -0.34
FAM3A-222ENST00000621967 C9orf85Q96MD7 179 aa12.92□□□□□ -0.34
FAM3A-222ENST00000621967 TRAV12-3A0A0B4J271 114 aa12.91□□□□□ -0.34
FAM3A-222ENST00000621967 LINC01549A6NIU2 74 aa12.91□□□□□ -0.34
FAM3A-222ENST00000621967 K7EQG2 157 aa12.91□□□□□ -0.34
FAM3A-222ENST00000621967 LGALS1P09382 135 aaKnown RBP12.91□□□□□ -0.34
FAM3A-222ENST00000621967 CD7P09564 240 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms