RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 BAGE3Q86Y29 109 aa11.44□□□□□ -0.58
CBWD3-216ENST00000621396 LINC00467Q9BRT7 94 aa11.44□□□□□ -0.58
CBWD3-216ENST00000621396 KIF25-AS1Q9Y6Z4 181 aa11.44□□□□□ -0.58
CBWD3-216ENST00000621396 F5H697 171 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 LINC00310P59036 64 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 SYT8Q8NBV8 401 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 OR11H2Q8NH07 326 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 DPH3P1Q9H4G8 78 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 NACAE9PAV3 2078 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 KIR2DL5BA0A0G2JN68 375 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 KIR2DL5BA0A0G2JPC4 375 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 NPYP01303 97 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 CRYGDP07320 174 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 SMIM17P0DL12 118 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 LINC00315P59091 139 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 KIR2DL5AQ8N109 375 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 KIR2DL5BQ8NHK3 375 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 PRELID3AQ96N28 172 aa11.43□□□□□ -0.58
CBWD3-216ENST00000621396 IGHV3-53P01767 116 aa11.42□□□□□ -0.58
CBWD3-216ENST00000621396 ORMDL3Q8N138 153 aa11.42□□□□□ -0.58
CBWD3-216ENST00000621396 SERF1AO75920 110 aa11.41□□□□□ -0.58
CBWD3-216ENST00000621396 RPL39LQ96EH5 51 aaKnown RBP11.41□□□□□ -0.58
CBWD3-216ENST00000621396 DEFB121Q5J5C9 76 aa11.41□□□□□ -0.58
CBWD3-216ENST00000621396 POM121L12Q8N7R1 296 aa11.41□□□□□ -0.58
CBWD3-216ENST00000621396 Q9UF83 564 aa11.41□□□□□ -0.58
CBWD3-216ENST00000621396 LOC105371267A0A1B0GV96 52 aa11.4□□□□□ -0.58
CBWD3-216ENST00000621396 GAGE12BA1L429 117 aa11.4□□□□□ -0.58
CBWD3-216ENST00000621396 GAGE7O76087 117 aa11.4□□□□□ -0.58
CBWD3-216ENST00000621396 GAGE12FP0CL80 117 aa11.4□□□□□ -0.58
CBWD3-216ENST00000621396 GAGE12GP0CL81 117 aa11.4□□□□□ -0.58
CBWD3-216ENST00000621396 GAGE12IP0CL82 117 aa11.4□□□□□ -0.58
CBWD3-216ENST00000621396 RIPPLY3P57055 190 aa11.4□□□□□ -0.58
CBWD3-216ENST00000621396 ZNF56Q15929 161 aa11.4□□□□□ -0.58
CBWD3-216ENST00000621396 IL17DQ8TAD2 202 aa11.4□□□□□ -0.58
CBWD3-216ENST00000621396 MRAPQ8TCY5 172 aa11.4□□□□□ -0.58
CBWD3-216ENST00000621396 C16orf74Q96GX8 76 aa11.4□□□□□ -0.58
CBWD3-216ENST00000621396 IFITM10A6NMD0 228 aa11.4□□□□□ -0.58
CBWD3-216ENST00000621396 K7EIL1 84 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 PMCHL1Q16048 86 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 CFAP126Q5VTH2 177 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 Q6ZSN1 163 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 URB1-AS1Q96HZ7 61 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 P0DMU3 169 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 FAM231AP0DMU4 169 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 FAM231CP0DMU5 169 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 DEFB130BP0DP73 79 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 DEFB130AP0DP74 79 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 IFI27P40305 119 aaPredicted RBP11.39□□□□□ -0.59
CBWD3-216ENST00000621396 RASL10AQ92737 203 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 ZNF479Q96JC4 524 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 U3KQK5 164 aa11.39□□□□□ -0.59
CBWD3-216ENST00000621396 TNFRSF6BO95407 300 aa11.38□□□□□ -0.59
CBWD3-216ENST00000621396 Q0VG73 95 aa11.38□□□□□ -0.59
CBWD3-216ENST00000621396 SUMO4Q6EEV6 95 aa11.38□□□□□ -0.59
CBWD3-216ENST00000621396 FAM19A2Q8N3H0 131 aa11.38□□□□□ -0.59
CBWD3-216ENST00000621396 SPXQ9BT56 116 aa11.38□□□□□ -0.59
CBWD3-216ENST00000621396 HOXA5P20719 270 aa11.38□□□□□ -0.59
CBWD3-216ENST00000621396 RNASEKQ6P5S7 137 aaKnown RBP11.38□□□□□ -0.59
CBWD3-216ENST00000621396 NIT1Q86X76 327 aa11.38□□□□□ -0.59
CBWD3-216ENST00000621396 ZMAT5Q9UDW3 170 aaKnown RBP11.38□□□□□ -0.59
CBWD3-216ENST00000621396 IGHV4-28A0A0C4DH34 117 aa11.37□□□□□ -0.59
CBWD3-216ENST00000621396 OR10J3Q5JRS4 329 aa11.37□□□□□ -0.59
CBWD3-216ENST00000621396 HIST3H2BBQ8N257 126 aa11.37□□□□□ -0.59
CBWD3-216ENST00000621396 NRACQ8N912 160 aa11.37□□□□□ -0.59
CBWD3-216ENST00000621396 SBSPONQ8IVN8 264 aa11.37□□□□□ -0.59
CBWD3-216ENST00000621396 RNF183Q96D59 192 aa11.37□□□□□ -0.59
CBWD3-216ENST00000621396 COL7A1Q02388 2944 aa11.36□□□□□ -0.59
CBWD3-216ENST00000621396 TRGV2A0A075B6R0 118 aa11.36□□□□□ -0.59
CBWD3-216ENST00000621396 DAZ2Q13117 558 aaKnown RBP11.36□□□□□ -0.59
CBWD3-216ENST00000621396 Q6ZWC4 215 aa11.36□□□□□ -0.59
CBWD3-216ENST00000621396 NEGR1Q7Z3B1 354 aa11.36□□□□□ -0.59
CBWD3-216ENST00000621396 FABP4P15090 132 aa11.36□□□□□ -0.59
CBWD3-216ENST00000621396 OVOL2Q9BRP0 275 aa11.36□□□□□ -0.59
CBWD3-216ENST00000621396 UBE2CO00762 179 aa11.35□□□□□ -0.59
CBWD3-216ENST00000621396 COA6Q5JTJ3 125 aaKnown RBP11.35□□□□□ -0.59
CBWD3-216ENST00000621396 OR4C5Q8NGB2 326 aa11.35□□□□□ -0.59
CBWD3-216ENST00000621396 PRSS3P2Q8NHM4 247 aa11.35□□□□□ -0.59
CBWD3-216ENST00000621396 A8MWV9 139 aa11.35□□□□□ -0.59
CBWD3-216ENST00000621396 PMCHP20382 165 aa11.35□□□□□ -0.59
CBWD3-216ENST00000621396 FAM222AQ5U5X8 452 aa11.35□□□□□ -0.59
CBWD3-216ENST00000621396 UFSP1Q6NVU6 142 aa11.35□□□□□ -0.59
CBWD3-216ENST00000621396 A8MZ25 164 aa11.34□□□□□ -0.59
CBWD3-216ENST00000621396 Q8NAQ8 132 aa11.34□□□□□ -0.59
CBWD3-216ENST00000621396 CELA1Q9UNI1 258 aa11.34□□□□□ -0.59
CBWD3-216ENST00000621396 M0QY20 66 aa11.34□□□□□ -0.59
CBWD3-216ENST00000621396 PPBPP02775 128 aa11.34□□□□□ -0.59
CBWD3-216ENST00000621396 LINC00614P0C842 121 aa11.34□□□□□ -0.59
CBWD3-216ENST00000621396 S100A2P29034 98 aa11.34□□□□□ -0.59
CBWD3-216ENST00000621396 AKR1D1P51857 326 aa11.34□□□□□ -0.59
CBWD3-216ENST00000621396 MRAP2Q96G30 205 aa11.34□□□□□ -0.59
CBWD3-216ENST00000621396 HIST1H2BLQ99880 126 aa11.33□□□□□ -0.6
CBWD3-216ENST00000621396 MEGF8Q7Z7M0 2845 aa11.33□□□□□ -0.6
CBWD3-216ENST00000621396 TCAPO15273 167 aa11.32□□□□□ -0.6
CBWD3-216ENST00000621396 RS1O15537 224 aa11.32□□□□□ -0.6
CBWD3-216ENST00000621396 LGALS9BQ3B8N2 356 aa11.32□□□□□ -0.6
CBWD3-216ENST00000621396 KPRPQ5T749 579 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-216ENST00000621396 SMIM9A6NGZ8 99 aa11.31□□□□□ -0.6
CBWD3-216ENST00000621396 MAP1LC3AQ9H492 121 aa11.31□□□□□ -0.6
CBWD3-216ENST00000621396 HSBP1O75506 76 aa11.31□□□□□ -0.6
CBWD3-216ENST00000621396 AMTP48728 403 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms