RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 COX19Q49B96 90 aa5.74□□□□□ -1.49
CPNE3-209ENST00000620393 NDUFAF3Q9BU61 184 aa5.74□□□□□ -1.49
CPNE3-209ENST00000620393 ZMAT4Q9H898 229 aa5.74□□□□□ -1.49
CPNE3-209ENST00000620393 TRGV1A0A0A0MS02 117 aa5.73□□□□□ -1.49
CPNE3-209ENST00000620393 LYRM9A8MSI8 78 aa5.73□□□□□ -1.49
CPNE3-209ENST00000620393 DEFB4AO15263 64 aa5.73□□□□□ -1.49
CPNE3-209ENST00000620393 TRGC1P0CF51 173 aa5.73□□□□□ -1.49
CPNE3-209ENST00000620393 NHLRC4P0CG21 123 aaPredicted RBP5.73□□□□□ -1.49
CPNE3-209ENST00000620393 Q6ZTI0 123 aa5.73□□□□□ -1.49
CPNE3-209ENST00000620393 SMIM15Q7Z3B0 74 aa5.73□□□□□ -1.49
CPNE3-209ENST00000620393 LINC00612Q8N6U2 182 aa5.73□□□□□ -1.49
CPNE3-209ENST00000620393 GATD1Q8NB37 220 aa5.73□□□□□ -1.49
CPNE3-209ENST00000620393 GNB1LQ9BYB4 327 aa5.73□□□□□ -1.49
CPNE3-209ENST00000620393 TMEM191AQ9H0A3 160 aa5.73□□□□□ -1.49
CPNE3-209ENST00000620393 MRPL16Q9NX20 251 aaKnown RBP5.73□□□□□ -1.49
CPNE3-209ENST00000620393 DKK2Q9UBU2 259 aa5.73□□□□□ -1.49
CPNE3-209ENST00000620393 NBEAL2Q6ZNJ1 2754 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 GAGE12BA1L429 117 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 A8MWV9 139 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 RS1O15537 224 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 GAGE7O76087 117 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 CRYGDP07320 174 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 GAGE12FP0CL80 117 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 GAGE12GP0CL81 117 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 GAGE12IP0CL82 117 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 SPART-AS1P0CW21 52 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 RAB5AP20339 215 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 EVI2AP22794 236 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 RAB4BP61018 213 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 FAM222AQ5U5X8 452 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 CDPF1Q6NVV7 123 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 TMEM136Q6ZRR5 245 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 C14orf178Q8N769 122 aaPredicted RBP5.72□□□□□ -1.49
CPNE3-209ENST00000620393 POM121L12Q8N7R1 296 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 C18orf15Q96N68 181 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 C11orf68Q9H3H3 251 aaKnown RBP5.72□□□□□ -1.49
CPNE3-209ENST00000620393 JPT2Q9H910 190 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 KIF25-AS1Q9Y6Z4 181 aa5.72□□□□□ -1.49
CPNE3-209ENST00000620393 CIDEAO60543 219 aa5.71□□□□□ -1.5
CPNE3-209ENST00000620393 SMIM17P0DL12 118 aa5.71□□□□□ -1.5
CPNE3-209ENST00000620393 RAB4AP20338 218 aa5.71□□□□□ -1.5
CPNE3-209ENST00000620393 RPS10P46783 165 aaKnown RBP5.71□□□□□ -1.5
CPNE3-209ENST00000620393 LINC00315P59091 139 aa5.71□□□□□ -1.5
CPNE3-209ENST00000620393 CFAP126Q5VTH2 177 aa5.71□□□□□ -1.5
CPNE3-209ENST00000620393 FAM104BQ5XKR9 115 aa5.71□□□□□ -1.5
CPNE3-209ENST00000620393 AP1S3Q96PC3 154 aa5.71□□□□□ -1.5
CPNE3-209ENST00000620393 SAMD10Q9BYL1 202 aa5.71□□□□□ -1.5
CPNE3-209ENST00000620393 TRAPPC1Q9Y5R8 145 aa5.71□□□□□ -1.5
CPNE3-209ENST00000620393 TRGV2A0A075B6R0 118 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 A0A087WWL8 130 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 TRAV4A0A0B4J268 109 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 A0A0J9YWU9 116 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 TEX48A0A1B0GUV7 120 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 HLA-DQA1P01909 254 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 APCSP02743 223 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 MT-ND6P03923 174 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 DEFB130BP0DP73 79 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 DEFB130AP0DP74 79 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 UFSP1Q6NVU6 142 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 ZFP2Q6ZN57 461 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 AMN1Q8IY45 258 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 OR4C5Q8NGB2 326 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 RNF185Q96GF1 192 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 DPH3P1Q9H4G8 78 aa5.7□□□□□ -1.5
CPNE3-209ENST00000620393 RHODO00212 210 aa5.69□□□□□ -1.5
CPNE3-209ENST00000620393 DAD1P61803 113 aa5.69□□□□□ -1.5
CPNE3-209ENST00000620393 FABP9Q0Z7S8 132 aa5.69□□□□□ -1.5
CPNE3-209ENST00000620393 C12orf74Q32Q52 190 aa5.69□□□□□ -1.5
CPNE3-209ENST00000620393 MRPL51Q4U2R6 128 aaKnown RBP5.69□□□□□ -1.5
CPNE3-209ENST00000620393 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-209ENST00000620393 FRZBQ92765 325 aa5.69□□□□□ -1.5
CPNE3-209ENST00000620393 ZNF479Q96JC4 524 aa5.69□□□□□ -1.5
CPNE3-209ENST00000620393 CELA1Q9UNI1 258 aa5.69□□□□□ -1.5
CPNE3-209ENST00000620393 DNAH9Q9NYC9 4486 aa5.69□□□□□ -1.5
CPNE3-209ENST00000620393 MUC4Q99102 2169 aa5.69□□□□□ -1.5
CPNE3-209ENST00000620393 HUWE1Q7Z6Z7 4374 aaKnown RBP5.68□□□□□ -1.5
CPNE3-209ENST00000620393 IGHV3-73A0A0B4J1V6 119 aa5.68□□□□□ -1.5
CPNE3-209ENST00000620393 F5H697 171 aa5.68□□□□□ -1.5
CPNE3-209ENST00000620393 IGHV3-53P01767 116 aa5.68□□□□□ -1.5
CPNE3-209ENST00000620393 TRGC2P03986 189 aa5.68□□□□□ -1.5
CPNE3-209ENST00000620393 SLAQ13239 276 aa5.68□□□□□ -1.5
CPNE3-209ENST00000620393 FHL2Q14192 279 aa5.68□□□□□ -1.5
CPNE3-209ENST00000620393 FAM74A4Q5TZK3 123 aa5.68□□□□□ -1.5
CPNE3-209ENST00000620393 Q6ZSN1 163 aa5.68□□□□□ -1.5
CPNE3-209ENST00000620393 PHOX2AO14813 284 aa5.67□□□□□ -1.5
CPNE3-209ENST00000620393 PPBPP02775 128 aa5.67□□□□□ -1.5
CPNE3-209ENST00000620393 MGPP08493 103 aa5.67□□□□□ -1.5
CPNE3-209ENST00000620393 CKS2P33552 79 aa5.67□□□□□ -1.5
CPNE3-209ENST00000620393 KIAA1644Q3SXP7 199 aa5.67□□□□□ -1.5
CPNE3-209ENST00000620393 SUMO4Q6EEV6 95 aa5.67□□□□□ -1.5
CPNE3-209ENST00000620393 C11orf45Q8TAV5 145 aa5.67□□□□□ -1.5
CPNE3-209ENST00000620393 MRAP2Q96G30 205 aa5.67□□□□□ -1.5
CPNE3-209ENST00000620393 U3KQK5 164 aa5.67□□□□□ -1.5
CPNE3-209ENST00000620393 TRGV4A0A0C4DH28 118 aa5.66□□□□□ -1.5
CPNE3-209ENST00000620393 M0QY20 66 aa5.66□□□□□ -1.5
CPNE3-209ENST00000620393 GAS8-AS1O95177 125 aa5.66□□□□□ -1.5
CPNE3-209ENST00000620393 ATP5G1P05496 136 aa5.66□□□□□ -1.5
CPNE3-209ENST00000620393 GATA1P15976 413 aaPredicted RBP5.66□□□□□ -1.5
CPNE3-209ENST00000620393 NANOS2P60321 138 aaKnown RBP5.66□□□□□ -1.5
CPNE3-209ENST00000620393 ORMDL3Q8N138 153 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms