RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 H3BUT2 72 aa7.57□□□□□ -1.2
CDH23-213ENST00000619887 IGHG4P01861 327 aa7.57□□□□□ -1.2
CDH23-213ENST00000619887 GATA1P15976 413 aaPredicted RBP7.57□□□□□ -1.2
CDH23-213ENST00000619887 RPL36AP83881 106 aaKnown RBP7.57□□□□□ -1.2
CDH23-213ENST00000619887 RPL36ALQ969Q0 106 aaKnown RBP7.57□□□□□ -1.2
CDH23-213ENST00000619887 ZNF815PA8K554 130 aa7.57□□□□□ -1.2
CDH23-213ENST00000619887 H3BRM9 83 aa7.57□□□□□ -1.2
CDH23-213ENST00000619887 BRI3O95415 125 aa7.57□□□□□ -1.2
CDH23-213ENST00000619887 URB1-AS1Q96HZ7 61 aa7.57□□□□□ -1.2
CDH23-213ENST00000619887 DKK2Q9UBU2 259 aa7.57□□□□□ -1.2
CDH23-213ENST00000619887 F8VRH5 84 aa7.57□□□□□ -1.2
CDH23-213ENST00000619887 C11orf68Q9H3H3 251 aaKnown RBP7.57□□□□□ -1.2
CDH23-213ENST00000619887 SPCS1Q9Y6A9 102 aa7.57□□□□□ -1.2
CDH23-213ENST00000619887 ZNF292O60281 2723 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 TRAV2A0A0B4J234 112 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 NPSP0C0P6 89 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 HOXD3P31249 432 aaPredicted RBP7.56□□□□□ -1.2
CDH23-213ENST00000619887 LOXL1Q08397 574 aaPredicted RBP7.56□□□□□ -1.2
CDH23-213ENST00000619887 FOXI2Q6ZQN5 318 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 NEGR1Q7Z3B1 354 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 TRPT1Q86TN4 253 aaKnown RBP7.56□□□□□ -1.2
CDH23-213ENST00000619887 OR5A1Q8NGJ0 315 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 CHAC1Q9BUX1 264 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 KIR3DS1Q14943 382 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 DEFB125Q8N687 156 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 MRPL35Q9NZE8 188 aaKnown RBP7.56□□□□□ -1.2
CDH23-213ENST00000619887 TRAV13-1A0A0B4J241 112 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 ADARB2-AS1A8MUL3 147 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 GNRH2O43555 120 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 HIST2H2BCQ6DN03 193 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 CENPEQ02224 2701 aa7.56□□□□□ -1.2
CDH23-213ENST00000619887 CMC4P56277 68 aaPredicted RBP7.55□□□□□ -1.2
CDH23-213ENST00000619887 DEFB1P60022 68 aa7.55□□□□□ -1.2
CDH23-213ENST00000619887 NPC2P61916 151 aa7.55□□□□□ -1.2
CDH23-213ENST00000619887 TMEM141Q96I45 108 aa7.55□□□□□ -1.2
CDH23-213ENST00000619887 HLA-DRB4P13762 266 aa7.55□□□□□ -1.2
CDH23-213ENST00000619887 HLA-DRB4X5D2U9 266 aa7.55□□□□□ -1.2
CDH23-213ENST00000619887 RNF185Q96GF1 192 aa7.55□□□□□ -1.2
CDH23-213ENST00000619887 C1QTNF4Q9BXJ3 329 aa7.55□□□□□ -1.2
CDH23-213ENST00000619887 MALP21145 153 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 SLURP1P55000 103 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 KLK9Q2XQG4 91 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 C20orf173Q96LM9 149 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 SDHAF1A6NFY7 115 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 ZFAND2AQ8N6M9 145 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 ODF3Q96PU9 254 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 PRADC1Q9BSG0 188 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 IGHV3-38A0A0C4DH36 116 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 DNAL4O96015 105 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 IGLV1-40P01703 118 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 CFAP161Q6P656 301 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 BOD1L2Q8IYS8 172 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 TP53TG1Q9Y2A0 90 aa7.54□□□□□ -1.2
CDH23-213ENST00000619887 GAGE12BA1L429 117 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 GAGE12JA6NER3 117 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 GAGE7O76087 117 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 GAGE12FP0CL80 117 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 GAGE12GP0CL81 117 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 GAGE12IP0CL82 117 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 GAGE4Q13068 117 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 GAGE5Q13069 117 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 GAGE13Q4V321 117 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 IGHV4-4A0A075B6R2 117 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 ODF1Q14990 250 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 TAL2Q16559 108 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 SAMD5Q5TGI4 173 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 ZNF580Q9UK33 172 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 PMVKQ15126 192 aa7.53□□□□□ -1.2
CDH23-213ENST00000619887 TRAV12-1A0A0B4J245 112 aa7.52□□□□□ -1.21
CDH23-213ENST00000619887 C9orf118A6NHY6 69 aa7.52□□□□□ -1.21
CDH23-213ENST00000619887 RHODO00212 210 aa7.52□□□□□ -1.21
CDH23-213ENST00000619887 PIFOQ8TCI5 191 aa7.52□□□□□ -1.21
CDH23-213ENST00000619887 APRG1Q8IVJ8 170 aa7.52□□□□□ -1.21
CDH23-213ENST00000619887 LRRC75A-AS1Q8N1F1 130 aa7.52□□□□□ -1.21
CDH23-213ENST00000619887 ZNF625Q96I27 306 aaPredicted RBP7.52□□□□□ -1.21
CDH23-213ENST00000619887 A0A1B0GWB2 263 aa7.52□□□□□ -1.21
CDH23-213ENST00000619887 SPXQ9BT56 116 aa7.52□□□□□ -1.21
CDH23-213ENST00000619887 A0A0J9YX75 114 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 A8MWV9 139 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 PCP2Q8IVA1 136 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 RPL39LQ96EH5 51 aaKnown RBP7.51□□□□□ -1.21
CDH23-213ENST00000619887 HIGD1BQ9P298 99 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 C11orf21Q9P2W6 132 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 IGHV4OR15-8A0A075B7B6 117 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 A0A087WW49 117 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 CCL24O00175 119 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 LGALS9O00182 355 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 RHOHQ15669 191 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 PSMB8P28062 276 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 MTURNQ8N3F0 131 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 ZNF479Q96JC4 524 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 CRPP02741 224 aa7.51□□□□□ -1.21
CDH23-213ENST00000619887 I3L3M4 83 aa7.5□□□□□ -1.21
CDH23-213ENST00000619887 Q6YL49 198 aa7.5□□□□□ -1.21
CDH23-213ENST00000619887 TOMM6Q96B49 74 aa7.5□□□□□ -1.21
CDH23-213ENST00000619887 A0A096LPF7 62 aa7.5□□□□□ -1.21
CDH23-213ENST00000619887 MYMXA0A1B0GTQ4 84 aa7.5□□□□□ -1.21
CDH23-213ENST00000619887 A0A1B0GV72 72 aa7.5□□□□□ -1.21
CDH23-213ENST00000619887 LINC00158P58513 81 aa7.5□□□□□ -1.21
CDH23-213ENST00000619887 PLEKHB2Q96CS7 222 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms