RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 HBDP02042 147 aa14.86□□□□□ -0.03
MMP28-207ENST00000619655 PMCHL2Q9BQD1 86 aa14.86□□□□□ -0.03
MMP28-207ENST00000619655 ZNF747Q9BV97 191 aa14.86□□□□□ -0.03
MMP28-207ENST00000619655 FN1P02751 2386 aaKnown RBP14.86□□□□□ -0.03
MMP28-207ENST00000619655 A0A087WWL8 130 aa14.86□□□□□ -0.03
MMP28-207ENST00000619655 SMIM17P0DL12 118 aa14.86□□□□□ -0.03
MMP28-207ENST00000619655 ODF3L2Q3SX64 289 aa14.86□□□□□ -0.03
MMP28-207ENST00000619655 MRAP2Q96G30 205 aa14.86□□□□□ -0.03
MMP28-207ENST00000619655 NXT2Q9NPJ8 142 aaKnown RBP14.86□□□□□ -0.03
MMP28-207ENST00000619655 PRM2P04554 102 aa14.85□□□□□ -0.03
MMP28-207ENST00000619655 KRTAP10-3P60369 221 aa14.85□□□□□ -0.03
MMP28-207ENST00000619655 RPL39LQ96EH5 51 aaKnown RBP14.84□□□□□ -0.03
MMP28-207ENST00000619655 TRAV9-2A0A087WT02 112 aa14.84□□□□□ -0.03
MMP28-207ENST00000619655 TRAV25A0A0B4J276 109 aa14.84□□□□□ -0.03
MMP28-207ENST00000619655 NXPH4O95158 308 aa14.84□□□□□ -0.03
MMP28-207ENST00000619655 HNRNPA3P51991 378 aaKnown RBP14.84□□□□□ -0.03
MMP28-207ENST00000619655 FAM74A4Q5TZK3 123 aa14.84□□□□□ -0.03
MMP28-207ENST00000619655 C2CD3Q4AC94 2353 aa14.83□□□□□ -0.03
MMP28-207ENST00000619655 C20orf202A1L168 122 aa14.83□□□□□ -0.03
MMP28-207ENST00000619655 Q6ZN92 141 aa14.83□□□□□ -0.03
MMP28-207ENST00000619655 Q8N8P6 123 aa14.83□□□□□ -0.03
MMP28-207ENST00000619655 C9orf85Q96MD7 179 aa14.83□□□□□ -0.03
MMP28-207ENST00000619655 C18orf15Q96N68 181 aa14.83□□□□□ -0.03
MMP28-207ENST00000619655 FLNBO75369 2602 aaKnown RBP14.83□□□□□ -0.03
MMP28-207ENST00000619655 RASL10AQ92737 203 aa14.83□□□□□ -0.04
MMP28-207ENST00000619655 JMJD1CQ15652 2540 aa14.82□□□□□ -0.04
MMP28-207ENST00000619655 OR11H12B2RN74 326 aa14.82□□□□□ -0.04
MMP28-207ENST00000619655 STHQ8IWL8 128 aa14.82□□□□□ -0.04
MMP28-207ENST00000619655 STPG4Q8N801 248 aa14.82□□□□□ -0.04
MMP28-207ENST00000619655 IGLV2-18A0A075B6J9 118 aa14.81□□□□□ -0.04
MMP28-207ENST00000619655 A8MTW9 85 aa14.81□□□□□ -0.04
MMP28-207ENST00000619655 F5H697 171 aa14.81□□□□□ -0.04
MMP28-207ENST00000619655 ORAOV1Q8WV07 137 aa14.81□□□□□ -0.04
MMP28-207ENST00000619655 TRGV11A0A075B6L2 103 aa14.81□□□□□ -0.04
MMP28-207ENST00000619655 PET117Q6UWS5 81 aa14.81□□□□□ -0.04
MMP28-207ENST00000619655 IGLL1P15814 213 aa14.8□□□□□ -0.04
MMP28-207ENST00000619655 SYT8Q8NBV8 401 aa14.8□□□□□ -0.04
MMP28-207ENST00000619655 TMEM158Q8WZ71 300 aa14.8□□□□□ -0.04
MMP28-207ENST00000619655 KIF25-AS1Q9Y6Z4 181 aa14.8□□□□□ -0.04
MMP28-207ENST00000619655 ZNF876PQ49A33 203 aa14.8□□□□□ -0.04
MMP28-207ENST00000619655 XCL2Q9UBD3 114 aa14.8□□□□□ -0.04
MMP28-207ENST00000619655 SUMO2P61956 95 aaKnown RBP14.79□□□□□ -0.04
MMP28-207ENST00000619655 MRPS16Q9Y3D3 137 aaKnown RBP14.79□□□□□ -0.04
MMP28-207ENST00000619655 PF4P02776 101 aa14.78□□□□□ -0.04
MMP28-207ENST00000619655 FCER1GP30273 86 aa14.78□□□□□ -0.04
MMP28-207ENST00000619655 LINC00315P59091 139 aa14.78□□□□□ -0.04
MMP28-207ENST00000619655 LINC01587Q99440 93 aa14.78□□□□□ -0.04
MMP28-207ENST00000619655 SMIM2Q9BVW6 85 aa14.78□□□□□ -0.04
MMP28-207ENST00000619655 hDV102S1A0JD36 115 aa14.78□□□□□ -0.04
MMP28-207ENST00000619655 LINC01546A6NGU7 62 aa14.78□□□□□ -0.04
MMP28-207ENST00000619655 PCP4P48539 62 aa14.78□□□□□ -0.04
MMP28-207ENST00000619655 IFI27L1Q96BM0 104 aa14.78□□□□□ -0.04
MMP28-207ENST00000619655 LAGE3Q14657 143 aa14.77□□□□□ -0.04
MMP28-207ENST00000619655 SUMO4Q6EEV6 95 aa14.77□□□□□ -0.04
MMP28-207ENST00000619655 ZNF56Q15929 161 aa14.77□□□□□ -0.05
MMP28-207ENST00000619655 NDUFA11Q86Y39 141 aa14.77□□□□□ -0.05
MMP28-207ENST00000619655 WFDC10AQ9H1F0 79 aa14.77□□□□□ -0.05
MMP28-207ENST00000619655 IGHV3OR16-12A0A075B7B8 117 aa14.76□□□□□ -0.05
MMP28-207ENST00000619655 PRSS47A8MTI9 375 aa14.76□□□□□ -0.05
MMP28-207ENST00000619655 INSP01308 110 aa14.76□□□□□ -0.05
MMP28-207ENST00000619655 IGLV1-51P01701 117 aa14.76□□□□□ -0.05
MMP28-207ENST00000619655 LINC01545Q5VT33 79 aa14.76□□□□□ -0.05
MMP28-207ENST00000619655 DEFB104AQ8WTQ1 72 aa14.76□□□□□ -0.05
MMP28-207ENST00000619655 TENM1Q9UKZ4 2725 aa14.76□□□□□ -0.05
MMP28-207ENST00000619655 C21orf62-AS1Q17RA5 79 aa14.76□□□□□ -0.05
MMP28-207ENST00000619655 NEGR1Q7Z3B1 354 aa14.76□□□□□ -0.05
MMP28-207ENST00000619655 VWFP04275 2813 aa14.75□□□□□ -0.05
MMP28-207ENST00000619655 CRLF1O75462 422 aa14.75□□□□□ -0.05
MMP28-207ENST00000619655 NUDT3O95989 172 aa14.75□□□□□ -0.05
MMP28-207ENST00000619655 PTTG1IPP53801 180 aa14.75□□□□□ -0.05
MMP28-207ENST00000619655 DEFB125Q8N687 156 aa14.74□□□□□ -0.05
MMP28-207ENST00000619655 C20orf78Q9BR46 151 aa14.74□□□□□ -0.05
MMP28-207ENST00000619655 POM121L12Q8N7R1 296 aa14.74□□□□□ -0.05
MMP28-207ENST00000619655 CSTL1Q9H114 145 aa14.74□□□□□ -0.05
MMP28-207ENST00000619655 CCL25O15444 150 aa14.73□□□□□ -0.05
MMP28-207ENST00000619655 TRPT1Q86TN4 253 aaKnown RBP14.73□□□□□ -0.05
MMP28-207ENST00000619655 COX11Q9Y6N1 276 aa14.73□□□□□ -0.05
MMP28-207ENST00000619655 CRYGDP07320 174 aa14.72□□□□□ -0.05
MMP28-207ENST00000619655 NOTCH3Q9UM47 2321 aa14.72□□□□□ -0.05
MMP28-207ENST00000619655 IGHV3-73A0A0B4J1V6 119 aa14.72□□□□□ -0.05
MMP28-207ENST00000619655 HSBP1L1C9JCN9 74 aa14.72□□□□□ -0.05
MMP28-207ENST00000619655 UBE2V1Q13404 147 aa14.72□□□□□ -0.05
MMP28-207ENST00000619655 ST20Q9HBF5 79 aa14.72□□□□□ -0.05
MMP28-207ENST00000619655 PPP1R17O96001 155 aa14.71□□□□□ -0.05
MMP28-207ENST00000619655 HINT1P49773 126 aaPredicted RBP14.71□□□□□ -0.05
MMP28-207ENST00000619655 PRSS1P07477 247 aa14.71□□□□□ -0.05
MMP28-207ENST00000619655 ZNF415Q09FC8 603 aa14.71□□□□□ -0.05
MMP28-207ENST00000619655 TP73-AS1Q9UF72 201 aa14.7□□□□□ -0.06
MMP28-207ENST00000619655 RPL35AP18077 110 aaKnown RBP14.7□□□□□ -0.06
MMP28-207ENST00000619655 TCTAP57738 103 aa14.69□□□□□ -0.06
MMP28-207ENST00000619655 LGALS9BQ3B8N2 356 aa14.69□□□□□ -0.06
MMP28-207ENST00000619655 LGALS9CQ6DKI2 356 aa14.69□□□□□ -0.06
MMP28-207ENST00000619655 LINC00482Q8N8I6 264 aa14.69□□□□□ -0.06
MMP28-207ENST00000619655 DKK2Q9UBU2 259 aa14.69□□□□□ -0.06
MMP28-207ENST00000619655 F8P00451 2351 aa14.69□□□□□ -0.06
MMP28-207ENST00000619655 ORMDL2Q53FV1 153 aa14.69□□□□□ -0.06
MMP28-207ENST00000619655 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.69□□□□□ -0.06
MMP28-207ENST00000619655 CLUHP3Q96NS8 147 aa14.69□□□□□ -0.06
MMP28-207ENST00000619655 ATRQ13535 2644 aa14.68□□□□□ -0.06
MMP28-207ENST00000619655 K7EP13 123 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms