RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 RPL19P84098 196 aaKnown RBP5.65□□□□□ -1.5
NEK3-209ENST00000618856 RHOHQ15669 191 aa5.65□□□□□ -1.5
NEK3-209ENST00000618856 LINC00336Q6ZUF6 198 aa5.65□□□□□ -1.5
NEK3-209ENST00000618856 NEGR1Q7Z3B1 354 aa5.65□□□□□ -1.5
NEK3-209ENST00000618856 SH2D6Q7Z4S9 175 aa5.65□□□□□ -1.5
NEK3-209ENST00000618856 ZFP82Q8N141 532 aa5.65□□□□□ -1.5
NEK3-209ENST00000618856 SYT8Q8NBV8 401 aa5.65□□□□□ -1.5
NEK3-209ENST00000618856 FAM210AQ96ND0 272 aa5.65□□□□□ -1.5
NEK3-209ENST00000618856 SAMD10Q9BYL1 202 aa5.65□□□□□ -1.5
NEK3-209ENST00000618856 KRTAP1-5Q9BYS1 174 aa5.65□□□□□ -1.5
NEK3-209ENST00000618856 JPT2Q9H910 190 aa5.65□□□□□ -1.5
NEK3-209ENST00000618856 PHLDA3Q9Y5J5 127 aa5.65□□□□□ -1.5
NEK3-209ENST00000618856 RYR1P21817 5038 aa5.64□□□□□ -1.51
NEK3-209ENST00000618856 LOC100131303A0A0U1RQF7 123 aa5.64□□□□□ -1.51
NEK3-209ENST00000618856 K7EN84 100 aa5.64□□□□□ -1.51
NEK3-209ENST00000618856 M0R2N4 97 aa5.64□□□□□ -1.51
NEK3-209ENST00000618856 RHODO00212 210 aa5.64□□□□□ -1.51
NEK3-209ENST00000618856 SRIP30626 198 aa5.64□□□□□ -1.51
NEK3-209ENST00000618856 OCC1Q8TAD7 63 aa5.64□□□□□ -1.51
NEK3-209ENST00000618856 BIN3Q9NQY0 253 aa5.64□□□□□ -1.51
NEK3-209ENST00000618856 LY96Q9Y6Y9 160 aa5.64□□□□□ -1.51
NEK3-209ENST00000618856 KIF25-AS1Q9Y6Z4 181 aa5.64□□□□□ -1.51
NEK3-209ENST00000618856 APOBP04114 4563 aaKnown RBP5.63□□□□□ -1.51
NEK3-209ENST00000618856 IGHV3-73A0A0B4J1V6 119 aa5.63□□□□□ -1.51
NEK3-209ENST00000618856 LINC00315P59091 139 aa5.63□□□□□ -1.51
NEK3-209ENST00000618856 RPS20P60866 119 aaKnown RBP5.63□□□□□ -1.51
NEK3-209ENST00000618856 PRR27Q6MZM9 219 aa5.63□□□□□ -1.51
NEK3-209ENST00000618856 FAM231DQ6ZW35 169 aa5.63□□□□□ -1.51
NEK3-209ENST00000618856 NUDT10Q8NFP7 164 aa5.63□□□□□ -1.51
NEK3-209ENST00000618856 OR10AG1Q8NH19 301 aa5.63□□□□□ -1.51
NEK3-209ENST00000618856 NUDT11Q96G61 164 aa5.63□□□□□ -1.51
NEK3-209ENST00000618856 CNFNQ9BYD5 112 aa5.63□□□□□ -1.51
NEK3-209ENST00000618856 Q9UF83 564 aa5.63□□□□□ -1.51
NEK3-209ENST00000618856 K7EP13 123 aa5.62□□□□□ -1.51
NEK3-209ENST00000618856 M0R381 172 aa5.62□□□□□ -1.51
NEK3-209ENST00000618856 SIVA1O15304 175 aa5.62□□□□□ -1.51
NEK3-209ENST00000618856 SRP19P09132 144 aaKnown RBP5.62□□□□□ -1.51
NEK3-209ENST00000618856 DNAH10OSP0CZ25 163 aa5.62□□□□□ -1.51
NEK3-209ENST00000618856 TTC32Q5I0X7 151 aa5.62□□□□□ -1.51
NEK3-209ENST00000618856 TOR2AQ5JU69 321 aa5.62□□□□□ -1.51
NEK3-209ENST00000618856 C1orf134Q5TEV5 83 aa5.62□□□□□ -1.51
NEK3-209ENST00000618856 WDR73Q6P4I2 378 aa5.62□□□□□ -1.51
NEK3-209ENST00000618856 C14orf178Q8N769 122 aaPredicted RBP5.62□□□□□ -1.51
NEK3-209ENST00000618856 OR10G8Q8NGN5 311 aa5.62□□□□□ -1.51
NEK3-209ENST00000618856 PCNPQ8WW12 178 aaKnown RBP5.62□□□□□ -1.51
NEK3-209ENST00000618856 PRADC1Q9BSG0 188 aa5.62□□□□□ -1.51
NEK3-209ENST00000618856 SMDT1Q9H4I9 107 aa5.62□□□□□ -1.51
NEK3-209ENST00000618856 DNAH8Q96JB1 4490 aa5.62□□□□□ -1.51
NEK3-209ENST00000618856 A0A087WWL8 130 aa5.61□□□□□ -1.51
NEK3-209ENST00000618856 TRBV10-1A0A0K0K1A3 114 aa5.61□□□□□ -1.51
NEK3-209ENST00000618856 C9JQL5 133 aa5.61□□□□□ -1.51
NEK3-209ENST00000618856 F2Z2F3 143 aa5.61□□□□□ -1.51
NEK3-209ENST00000618856 P01737 135 aa5.61□□□□□ -1.51
NEK3-209ENST00000618856 GZMBP10144 247 aa5.61□□□□□ -1.51
NEK3-209ENST00000618856 CTRLP40313 264 aa5.61□□□□□ -1.51
NEK3-209ENST00000618856 FOXA3P55318 350 aaPredicted RBP5.61□□□□□ -1.51
NEK3-209ENST00000618856 RAB4BP61018 213 aa5.61□□□□□ -1.51
NEK3-209ENST00000618856 Q6ZRN7 208 aaPredicted RBP5.61□□□□□ -1.51
NEK3-209ENST00000618856 LINC01551Q86U37 167 aa5.61□□□□□ -1.51
NEK3-209ENST00000618856 C6orf223Q8N319 242 aa5.61□□□□□ -1.51
NEK3-209ENST00000618856 OR2D3Q8NGH3 330 aa5.61□□□□□ -1.51
NEK3-209ENST00000618856 DAZAP1Q96EP5 407 aaKnown RBP5.61□□□□□ -1.51
NEK3-209ENST00000618856 XKRY2A2RUG3 117 aa5.6□□□□□ -1.51
NEK3-209ENST00000618856 PRSS29PA6NIE9 313 aa5.6□□□□□ -1.51
NEK3-209ENST00000618856 CACNG7P62955 275 aa5.6□□□□□ -1.51
NEK3-209ENST00000618856 CT83Q5H943 113 aa5.6□□□□□ -1.51
NEK3-209ENST00000618856 SOHLH1Q5JUK2 328 aa5.6□□□□□ -1.51
NEK3-209ENST00000618856 LELP1Q5T871 98 aa5.6□□□□□ -1.51
NEK3-209ENST00000618856 WFDC10BQ8IUB3 73 aa5.6□□□□□ -1.51
NEK3-209ENST00000618856 FER1L6-AS1Q8NA97 138 aa5.6□□□□□ -1.51
NEK3-209ENST00000618856 ATP6V0E2Q8NHE4 81 aa5.6□□□□□ -1.51
NEK3-209ENST00000618856 GTSF1Q8WW33 167 aa5.6□□□□□ -1.51
NEK3-209ENST00000618856 EIF5A2Q9GZV4 153 aaKnown RBP5.6□□□□□ -1.51
NEK3-209ENST00000618856 RNASE7Q9H1E1 156 aaKnown RBP5.6□□□□□ -1.51
NEK3-209ENST00000618856 GTSF1LQ9H1H1 148 aa5.6□□□□□ -1.51
NEK3-209ENST00000618856 RPP21Q9H633 154 aaKnown RBP5.6□□□□□ -1.51
NEK3-209ENST00000618856 HSPG2P98160 4391 aa5.59□□□□□ -1.51
NEK3-209ENST00000618856 TMEM238LA0A1B0GVL6 79 aa5.59□□□□□ -1.51
NEK3-209ENST00000618856 UBE2D3P61077 147 aa5.59□□□□□ -1.51
NEK3-209ENST00000618856 UBE2D2P62837 147 aa5.59□□□□□ -1.51
NEK3-209ENST00000618856 SRSF3P84103 164 aaKnown RBP5.59□□□□□ -1.51
NEK3-209ENST00000618856 FAM74A3Q4VXF1 159 aa5.59□□□□□ -1.51
NEK3-209ENST00000618856 LINC01556Q5JQF7 62 aa5.59□□□□□ -1.51
NEK3-209ENST00000618856 FAM74A4Q5TZK3 123 aa5.59□□□□□ -1.51
NEK3-209ENST00000618856 SPANXN1Q5VSR9 72 aa5.59□□□□□ -1.51
NEK3-209ENST00000618856 LYZL1Q6UWQ5 148 aa5.59□□□□□ -1.51
NEK3-209ENST00000618856 SMIM7Q9BQ49 75 aa5.59□□□□□ -1.51
NEK3-209ENST00000618856 MSRB1Q9NZV6 116 aa5.59□□□□□ -1.51
NEK3-209ENST00000618856 TRBV7-3A0A075B6L6 115 aa5.58□□□□□ -1.52
NEK3-209ENST00000618856 IGHV3-38A0A0C4DH36 116 aa5.58□□□□□ -1.52
NEK3-209ENST00000618856 MUC21A0A0G2JKD1 596 aa5.58□□□□□ -1.52
NEK3-209ENST00000618856 MUC21A0A140T8X8 626 aa5.58□□□□□ -1.52
NEK3-209ENST00000618856 FAM231BA6NCW3 169 aa5.58□□□□□ -1.52
NEK3-209ENST00000618856 GAGE12JA6NER3 117 aa5.58□□□□□ -1.52
NEK3-209ENST00000618856 ZNF727A8MUV8 499 aa5.58□□□□□ -1.52
NEK3-209ENST00000618856 GAGE1Q13065 139 aa5.58□□□□□ -1.52
NEK3-209ENST00000618856 GAGE4Q13068 117 aa5.58□□□□□ -1.52
NEK3-209ENST00000618856 GAGE5Q13069 117 aa5.58□□□□□ -1.52
NEK3-209ENST00000618856 GAGE13Q4V321 117 aa5.58□□□□□ -1.52
NEK3-209ENST00000618856 AP1S3Q96PC3 154 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms