RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 PMCHL1Q16048 86 aa8.27□□□□□ -1.09
POLR2A-209ENST00000617998 LINC00322Q6ZN03 302 aaPredicted RBP8.27□□□□□ -1.09
POLR2A-209ENST00000617998 CBLN2Q8IUK8 224 aa8.27□□□□□ -1.09
POLR2A-209ENST00000617998 HIGD2BQ4VC39 106 aa8.26□□□□□ -1.09
POLR2A-209ENST00000617998 C17orf77Q96MU5 243 aa8.26□□□□□ -1.09
POLR2A-209ENST00000617998 POLR3KQ9Y2Y1 108 aaPredicted RBP8.26□□□□□ -1.09
POLR2A-209ENST00000617998 PGPEP1LA6NFU8 196 aa8.26□□□□□ -1.09
POLR2A-209ENST00000617998 Q8N976 141 aa8.26□□□□□ -1.09
POLR2A-209ENST00000617998 TRAV1-1A0A0B4J248 108 aa8.26□□□□□ -1.09
POLR2A-209ENST00000617998 A0A1B0GV72 72 aa8.26□□□□□ -1.09
POLR2A-209ENST00000617998 TMEM213A2RRL7 107 aa8.26□□□□□ -1.09
POLR2A-209ENST00000617998 GTSF1LQ9H1H1 148 aa8.26□□□□□ -1.09
POLR2A-209ENST00000617998 SCRT2Q9NQ03 307 aa8.26□□□□□ -1.09
POLR2A-209ENST00000617998 C3orf84H3BNL1 204 aa8.26□□□□□ -1.09
POLR2A-209ENST00000617998 AMN1Q8IY45 258 aa8.26□□□□□ -1.09
POLR2A-209ENST00000617998 GAGE12HA6NDE8 117 aa8.25□□□□□ -1.09
POLR2A-209ENST00000617998 RNASE13Q5GAN3 156 aaKnown RBP8.25□□□□□ -1.09
POLR2A-209ENST00000617998 Q6ZTI0 123 aa8.25□□□□□ -1.09
POLR2A-209ENST00000617998 SPAG11BQ08648 103 aa8.25□□□□□ -1.09
POLR2A-209ENST00000617998 TRAV9-1A0A075B6T8 112 aa8.25□□□□□ -1.09
POLR2A-209ENST00000617998 CCDC140Q96MF4 163 aa8.25□□□□□ -1.09
POLR2A-209ENST00000617998 IGKCP01834 107 aa8.24□□□□□ -1.09
POLR2A-209ENST00000617998 ZNF124Q15973 351 aa8.24□□□□□ -1.09
POLR2A-209ENST00000617998 TMEM141Q96I45 108 aa8.24□□□□□ -1.09
POLR2A-209ENST00000617998 PROK1P58294 105 aa8.24□□□□□ -1.09
POLR2A-209ENST00000617998 Q6ZS46 218 aa8.24□□□□□ -1.09
POLR2A-209ENST00000617998 NIT1Q86X76 327 aa8.24□□□□□ -1.09
POLR2A-209ENST00000617998 ARHGAP21Q5T5U3 1957 aa8.24□□□□□ -1.09
POLR2A-209ENST00000617998 NDUFS5O43920 106 aa8.24□□□□□ -1.09
POLR2A-209ENST00000617998 LINC00614P0C842 121 aa8.24□□□□□ -1.09
POLR2A-209ENST00000617998 IFI27L1Q96BM0 104 aa8.24□□□□□ -1.09
POLR2A-209ENST00000617998 K7EQG2 157 aa8.23□□□□□ -1.09
POLR2A-209ENST00000617998 IGKV1-17P01599 117 aa8.23□□□□□ -1.09
POLR2A-209ENST00000617998 C9orf62Q8N4C0 152 aa8.23□□□□□ -1.09
POLR2A-209ENST00000617998 DEFB1P60022 68 aa8.23□□□□□ -1.09
POLR2A-209ENST00000617998 EML6Q6ZMW3 1958 aa8.23□□□□□ -1.09
POLR2A-209ENST00000617998 IGHV4-4A0A075B6R2 117 aa8.23□□□□□ -1.09
POLR2A-209ENST00000617998 TRAV26-2A0A0B4J265 109 aa8.23□□□□□ -1.09
POLR2A-209ENST00000617998 C16orf90A8MZG2 172 aa8.23□□□□□ -1.09
POLR2A-209ENST00000617998 UBE2D3P61077 147 aa8.23□□□□□ -1.09
POLR2A-209ENST00000617998 EBI3Q14213 229 aa8.23□□□□□ -1.09
POLR2A-209ENST00000617998 SUMO4Q6EEV6 95 aa8.23□□□□□ -1.09
POLR2A-209ENST00000617998 LAMTOR2Q9Y2Q5 125 aa8.23□□□□□ -1.09
POLR2A-209ENST00000617998 FN1P02751 2386 aaKnown RBP8.23□□□□□ -1.09
POLR2A-209ENST00000617998 TYMSP04818 313 aa8.22□□□□□ -1.09
POLR2A-209ENST00000617998 LINC01559Q495D7 138 aa8.22□□□□□ -1.09
POLR2A-209ENST00000617998 TLN2Q9Y4G6 2542 aa8.22□□□□□ -1.09
POLR2A-209ENST00000617998 CHAC1Q9BUX1 264 aa8.22□□□□□ -1.09
POLR2A-209ENST00000617998 PRSS46E5RG02 174 aa8.22□□□□□ -1.09
POLR2A-209ENST00000617998 MSRB1Q9NZV6 116 aa8.22□□□□□ -1.09
POLR2A-209ENST00000617998 TDRG1Q3Y452 100 aa8.22□□□□□ -1.09
POLR2A-209ENST00000617998 MBD3L1Q8WWY6 194 aa8.22□□□□□ -1.09
POLR2A-209ENST00000617998 IGLV2-8P01709 118 aa8.21□□□□□ -1.09
POLR2A-209ENST00000617998 RNF126Q9BV68 326 aa8.21□□□□□ -1.09
POLR2A-209ENST00000617998 WFDC1Q9HC57 220 aa8.21□□□□□ -1.09
POLR2A-209ENST00000617998 DOCK11Q5JSL3 2073 aa8.21□□□□□ -1.09
POLR2A-209ENST00000617998 C2orf66Q6UXQ4 117 aa8.21□□□□□ -1.1
POLR2A-209ENST00000617998 USP9XQ93008 2570 aaPredicted RBP8.21□□□□□ -1.1
POLR2A-209ENST00000617998 SRP19P09132 144 aaKnown RBP8.21□□□□□ -1.1
POLR2A-209ENST00000617998 FHL3Q13643 280 aa8.21□□□□□ -1.1
POLR2A-209ENST00000617998 PET117Q6UWS5 81 aa8.21□□□□□ -1.1
POLR2A-209ENST00000617998 PMCHL2Q9BQD1 86 aa8.2□□□□□ -1.1
POLR2A-209ENST00000617998 CEMP1Q6PRD7 247 aaPredicted RBP8.2□□□□□ -1.1
POLR2A-209ENST00000617998 CARD19Q96LW7 228 aa8.2□□□□□ -1.1
POLR2A-209ENST00000617998 IGLV1-51P01701 117 aa8.2□□□□□ -1.1
POLR2A-209ENST00000617998 REG3AQ06141 175 aa8.2□□□□□ -1.1
POLR2A-209ENST00000617998 BOD1L2Q8IYS8 172 aa8.2□□□□□ -1.1
POLR2A-209ENST00000617998 C1orf147Q96MC9 270 aaPredicted RBP8.2□□□□□ -1.1
POLR2A-209ENST00000617998 MDFIQ99750 246 aa8.2□□□□□ -1.1
POLR2A-209ENST00000617998 MYO9AB2RTY4 2548 aa8.2□□□□□ -1.1
POLR2A-209ENST00000617998 LINC00269Q8N2A0 174 aa8.2□□□□□ -1.1
POLR2A-209ENST00000617998 ATOH7Q8N100 152 aa8.19□□□□□ -1.1
POLR2A-209ENST00000617998 LINC00474Q9P2X8 69 aa8.19□□□□□ -1.1
POLR2A-209ENST00000617998 WI2-2373I1.2A0A1W2PRP0 233 aa8.19□□□□□ -1.1
POLR2A-209ENST00000617998 C9orf47Q6ZRZ4 202 aa8.19□□□□□ -1.1
POLR2A-209ENST00000617998 SFTA2Q6UW10 78 aa8.19□□□□□ -1.1
POLR2A-209ENST00000617998 Q9H8V8 135 aa8.19□□□□□ -1.1
POLR2A-209ENST00000617998 PLA2G2EQ9NZK7 142 aa8.19□□□□□ -1.1
POLR2A-209ENST00000617998 IGKV2D-26A0A0A0MRZ7 120 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 SPATA45Q537H7 98 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 COL5A1-AS1Q5SY13 56 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 LGALS9BQ3B8N2 356 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 Q6ZTC4 211 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 NUP35Q8NFH5 326 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 HIGD2AQ9BW72 106 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 CCL25O15444 150 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 FAM19A2Q8N3H0 131 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 SLC25A29Q8N8R3 303 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 NCOA6Q14686 2063 aaPredicted RBP8.18□□□□□ -1.1
POLR2A-209ENST00000617998 TRBV10-1A0A0K0K1A3 114 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 CLUHP3Q96NS8 147 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 LY6LH3BQJ8 138 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 K7ERU9 68 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 OVOL2Q9BRP0 275 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 SPINK8P0C7L1 97 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 FXYD5Q96DB9 178 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 GFRA4Q9GZZ7 299 aa8.18□□□□□ -1.1
POLR2A-209ENST00000617998 FGF6P10767 208 aa8.17□□□□□ -1.1
POLR2A-209ENST00000617998 SPANXA1Q9NS26 97 aa8.17□□□□□ -1.1
POLR2A-209ENST00000617998 PCP4P48539 62 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms