RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 DCANP1Q8TF63 244 aa2.56□□□□□ -2
LPP-220ENST00000617246 SCRT2Q9NQ03 307 aa2.55□□□□□ -2
LPP-220ENST00000617246 TRAV8-2A0A0B4J237 113 aa2.55□□□□□ -2
LPP-220ENST00000617246 RNASE2P10153 161 aaKnown RBP2.55□□□□□ -2
LPP-220ENST00000617246 CLLU1Q5K131 121 aa2.55□□□□□ -2
LPP-220ENST00000617246 Q9H8V8 135 aa2.55□□□□□ -2
LPP-220ENST00000617246 IGHV7-81A0A0B4J1V7 117 aa2.55□□□□□ -2
LPP-220ENST00000617246 A0A0G2JRQ6 117 aa2.55□□□□□ -2
LPP-220ENST00000617246 BLCAPP62952 87 aa2.55□□□□□ -2
LPP-220ENST00000617246 GFI1Q99684 422 aa2.55□□□□□ -2
LPP-220ENST00000617246 A4D1N5 150 aa2.55□□□□□ -2
LPP-220ENST00000617246 NIT1Q86X76 327 aa2.55□□□□□ -2
LPP-220ENST00000617246 DEFB104AQ8WTQ1 72 aa2.55□□□□□ -2
LPP-220ENST00000617246 SDHCQ99643 169 aaPredicted RBP2.55□□□□□ -2
LPP-220ENST00000617246 IGKV2-40A0A087WW87 121 aaPredicted RBP2.55□□□□□ -2
LPP-220ENST00000617246 IGKV2D-40P01614 121 aaPredicted RBP2.55□□□□□ -2
LPP-220ENST00000617246 MRPL52Q86TS9 123 aaKnown RBP2.55□□□□□ -2
LPP-220ENST00000617246 UBL5Q9BZL1 73 aa2.55□□□□□ -2
LPP-220ENST00000617246 CDIP1Q9H305 208 aa2.55□□□□□ -2
LPP-220ENST00000617246 APC2O95996 2303 aa2.55□□□□□ -2
LPP-220ENST00000617246 PRAC2D3DTV9 90 aa2.55□□□□□ -2
LPP-220ENST00000617246 ZNF702PQ9H963 129 aa2.55□□□□□ -2
LPP-220ENST00000617246 LINC00467Q9BRT7 94 aa2.55□□□□□ -2
LPP-220ENST00000617246 SCO2A0A1W2PP80 73 aa2.55□□□□□ -2
LPP-220ENST00000617246 ATP6V0CP27449 155 aa2.55□□□□□ -2
LPP-220ENST00000617246 ABCA1O95477 2261 aa2.55□□□□□ -2
LPP-220ENST00000617246 NMBP08949 121 aa2.55□□□□□ -2
LPP-220ENST00000617246 BOD1L2Q8IYS8 172 aa2.55□□□□□ -2
LPP-220ENST00000617246 SHANK2-AS3Q9BTD1 123 aa2.55□□□□□ -2
LPP-220ENST00000617246 WNK2Q9Y3S1 2297 aa2.55□□□□□ -2
LPP-220ENST00000617246 C5orf47Q569G3 176 aa2.55□□□□□ -2
LPP-220ENST00000617246 C1orf137Q5JT78 98 aa2.55□□□□□ -2
LPP-220ENST00000617246 Q86TA4 180 aa2.55□□□□□ -2
LPP-220ENST00000617246 Q8TAT8 98 aa2.55□□□□□ -2
LPP-220ENST00000617246 ZNF524Q96C55 264 aa2.55□□□□□ -2
LPP-220ENST00000617246 C18orf15Q96N68 181 aa2.55□□□□□ -2
LPP-220ENST00000617246 PLXNB1O43157 2135 aa2.55□□□□□ -2
LPP-220ENST00000617246 ARMS2P0C7Q2 107 aa2.55□□□□□ -2
LPP-220ENST00000617246 FHL3Q13643 280 aa2.55□□□□□ -2
LPP-220ENST00000617246 VSIG2Q96IQ7 327 aa2.55□□□□□ -2
LPP-220ENST00000617246 ZNF414Q96IQ9 312 aa2.55□□□□□ -2
LPP-220ENST00000617246 IGKV1D-13A0A0B4J2D9 117 aa2.55□□□□□ -2
LPP-220ENST00000617246 IGKV1-13P0DP09 117 aa2.55□□□□□ -2
LPP-220ENST00000617246 CADP27708 2225 aa2.54□□□□□ -2
LPP-220ENST00000617246 FAM24BQ8N5W8 94 aa2.54□□□□□ -2
LPP-220ENST00000617246 CRYGCP07315 174 aa2.54□□□□□ -2
LPP-220ENST00000617246 FAM19A5Q7Z5A7 132 aaPredicted RBP2.54□□□□□ -2
LPP-220ENST00000617246 POLR3KQ9Y2Y1 108 aaPredicted RBP2.54□□□□□ -2
LPP-220ENST00000617246 IGKV1D-8A0A087WSZ0 117 aa2.54□□□□□ -2
LPP-220ENST00000617246 IGKCP01834 107 aa2.54□□□□□ -2
LPP-220ENST00000617246 COX7B2Q8TF08 81 aa2.54□□□□□ -2
LPP-220ENST00000617246 RIF1Q5UIP0 2472 aaKnown RBP2.54□□□□□ -2
LPP-220ENST00000617246 RPS19P39019 145 aaKnown RBP2.54□□□□□ -2
LPP-220ENST00000617246 DEFB4AO15263 64 aa2.54□□□□□ -2
LPP-220ENST00000617246 LMO4P61968 165 aa2.54□□□□□ -2
LPP-220ENST00000617246 LGALS9CQ6DKI2 356 aa2.54□□□□□ -2
LPP-220ENST00000617246 LYPD6BQ8NI32 183 aa2.54□□□□□ -2
LPP-220ENST00000617246 UPK3BQ9BT76 320 aa2.54□□□□□ -2
LPP-220ENST00000617246 OCIAD2Q56VL3 154 aa2.54□□□□□ -2
LPP-220ENST00000617246 C14orf178Q8N769 122 aaPredicted RBP2.54□□□□□ -2
LPP-220ENST00000617246 TMEM14CQ9P0S9 112 aa2.54□□□□□ -2
LPP-220ENST00000617246 GAGE12HA6NDE8 117 aa2.54□□□□□ -2
LPP-220ENST00000617246 USP17L23D6RBM5 183 aa2.54□□□□□ -2
LPP-220ENST00000617246 Q6Q795 121 aa2.54□□□□□ -2
LPP-220ENST00000617246 SEM1Q6ZVN7 128 aa2.54□□□□□ -2
LPP-220ENST00000617246 Q6ZR03 302 aa2.54□□□□□ -2
LPP-220ENST00000617246 QRFPP83859 136 aa2.54□□□□□ -2
LPP-220ENST00000617246 PLAC8L1A1L4L8 177 aa2.54□□□□□ -2
LPP-220ENST00000617246 DPM2O94777 84 aa2.54□□□□□ -2
LPP-220ENST00000617246 TPSG1Q9NRR2 321 aa2.54□□□□□ -2
LPP-220ENST00000617246 IGKV1D-37A0A075B6S9 117 aa2.54□□□□□ -2
LPP-220ENST00000617246 NRACQ8N912 160 aa2.54□□□□□ -2
LPP-220ENST00000617246 A0A087X0M5 115 aa2.54□□□□□ -2
LPP-220ENST00000617246 A0A1B0GX30 115 aa2.54□□□□□ -2
LPP-220ENST00000617246 BRK1Q8WUW1 75 aa2.54□□□□□ -2
LPP-220ENST00000617246 PRB2P02812 416 aaPredicted RBP2.54□□□□□ -2
LPP-220ENST00000617246 FAM19A3Q7Z5A8 133 aa2.54□□□□□ -2
LPP-220ENST00000617246 OR10D4PQ8NGN7 298 aa2.54□□□□□ -2
LPP-220ENST00000617246 TCRAP04437 139 aa2.54□□□□□ -2
LPP-220ENST00000617246 NRTNQ99748 197 aa2.54□□□□□ -2
LPP-220ENST00000617246 RBM12B-AS1Q9P1G2 102 aa2.54□□□□□ -2
LPP-220ENST00000617246 PROP1O75360 226 aa2.53□□□□□ -2
LPP-220ENST00000617246 ANKRD17O75179 2603 aaKnown RBP2.53□□□□□ -2
LPP-220ENST00000617246 PSMB8P28062 276 aa2.53□□□□□ -2
LPP-220ENST00000617246 SH2D1AO60880 128 aa2.53□□□□□ -2
LPP-220ENST00000617246 TEX22C9J3V5 150 aa2.53□□□□□ -2
LPP-220ENST00000617246 IGLV10-54A0A075B6I4 117 aa2.53□□□□□ -2
LPP-220ENST00000617246 IZUMO1RA6ND01 250 aa2.53□□□□□ -2
LPP-220ENST00000617246 IGLV1-51P01701 117 aa2.53□□□□□ -2
LPP-220ENST00000617246 C3orf79P0CE67 100 aa2.53□□□□□ -2
LPP-220ENST00000617246 TFF3Q07654 80 aa2.53□□□□□ -2
LPP-220ENST00000617246 Q8N7P7 452 aa2.53□□□□□ -2
LPP-220ENST00000617246 NDUFA4L2Q9NRX3 87 aa2.53□□□□□ -2
LPP-220ENST00000617246 M0QXV9 152 aa2.53□□□□□ -2
LPP-220ENST00000617246 GFRA4Q9GZZ7 299 aa2.53□□□□□ -2
LPP-220ENST00000617246 SNRPCP09234 159 aaKnown RBP2.53□□□□□ -2
LPP-220ENST00000617246 UFSP1Q6NVU6 142 aa2.53□□□□□ -2
LPP-220ENST00000617246 Q6ZVH6 145 aa2.53□□□□□ -2
LPP-220ENST00000617246 RITA1Q96K30 269 aa2.53□□□□□ -2
LPP-220ENST00000617246 NDUFB4O95168 129 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms