RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 DAZ1Q9NQZ3 744 aaKnown RBP10.48□□□□□ -0.73
CACNA1C-231ENST00000616390 CYSLTR1Q9Y271 337 aa10.48□□□□□ -0.73
CACNA1C-231ENST00000616390 J3QLI3 93 aa10.48□□□□□ -0.73
CACNA1C-231ENST00000616390 RPL39LQ96EH5 51 aaKnown RBP10.48□□□□□ -0.73
CACNA1C-231ENST00000616390 SONP18583 2426 aaKnown RBP10.47□□□□□ -0.73
CACNA1C-231ENST00000616390 IGKV2D-26A0A0A0MRZ7 120 aa10.47□□□□□ -0.73
CACNA1C-231ENST00000616390 ASIPP42127 132 aa10.47□□□□□ -0.73
CACNA1C-231ENST00000616390 LAGE3Q14657 143 aa10.47□□□□□ -0.73
CACNA1C-231ENST00000616390 NHLRC4P0CG21 123 aaPredicted RBP10.47□□□□□ -0.73
CACNA1C-231ENST00000616390 IGLV2-18A0A075B6J9 118 aa10.46□□□□□ -0.73
CACNA1C-231ENST00000616390 IGLV1-40P01703 118 aa10.46□□□□□ -0.73
CACNA1C-231ENST00000616390 MYOZ3Q8TDC0 251 aa10.46□□□□□ -0.73
CACNA1C-231ENST00000616390 RAB37Q96AX2 223 aa10.46□□□□□ -0.73
CACNA1C-231ENST00000616390 TMEM8BA6NDV4 472 aa10.46□□□□□ -0.74
CACNA1C-231ENST00000616390 ZNF688P0C7X2 276 aa10.46□□□□□ -0.74
CACNA1C-231ENST00000616390 WNK1Q9H4A3 2382 aa10.45□□□□□ -0.74
CACNA1C-231ENST00000616390 EPG5Q9HCE0 2579 aa10.45□□□□□ -0.74
CACNA1C-231ENST00000616390 TRAV12-3A0A0B4J271 114 aa10.45□□□□□ -0.74
CACNA1C-231ENST00000616390 CCDC179H3BU77 68 aa10.45□□□□□ -0.74
CACNA1C-231ENST00000616390 IGKCP01834 107 aa10.45□□□□□ -0.74
CACNA1C-231ENST00000616390 ZC2HC1BQ5TFG8 222 aa10.45□□□□□ -0.74
CACNA1C-231ENST00000616390 JPT2Q9H910 190 aa10.45□□□□□ -0.74
CACNA1C-231ENST00000616390 MRPL35Q9NZE8 188 aaKnown RBP10.45□□□□□ -0.74
CACNA1C-231ENST00000616390 SETD2Q9BYW2 2564 aaPredicted RBP10.44□□□□□ -0.74
CACNA1C-231ENST00000616390 TRAV12-2A0A075B6T6 113 aa10.44□□□□□ -0.74
CACNA1C-231ENST00000616390 RNF223E7ERA6 249 aa10.44□□□□□ -0.74
CACNA1C-231ENST00000616390 H3BUA1 57 aa10.44□□□□□ -0.74
CACNA1C-231ENST00000616390 PSMG4Q5JS54 123 aa10.44□□□□□ -0.74
CACNA1C-231ENST00000616390 TMEM126AQ9H061 195 aa10.44□□□□□ -0.74
CACNA1C-231ENST00000616390 HIST2H2BDQ6DRA6 164 aa10.43□□□□□ -0.74
CACNA1C-231ENST00000616390 LENEPQ9Y5L5 61 aa10.43□□□□□ -0.74
CACNA1C-231ENST00000616390 ZNF469Q96JG9 3925 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-231ENST00000616390 K7EMI3 77 aa10.43□□□□□ -0.74
CACNA1C-231ENST00000616390 HHLA3Q9XRX5 114 aa10.43□□□□□ -0.74
CACNA1C-231ENST00000616390 LINC01356Q8N9X3 169 aa10.43□□□□□ -0.74
CACNA1C-231ENST00000616390 RASL10AQ92737 203 aa10.43□□□□□ -0.74
CACNA1C-231ENST00000616390 A0A087WWL8 130 aa10.42□□□□□ -0.74
CACNA1C-231ENST00000616390 CD7P09564 240 aa10.42□□□□□ -0.74
CACNA1C-231ENST00000616390 RNASE3P12724 160 aaKnown RBP10.42□□□□□ -0.74
CACNA1C-231ENST00000616390 SYNJ2BPP57105 145 aa10.42□□□□□ -0.74
CACNA1C-231ENST00000616390 SMIM2Q9BVW6 85 aa10.42□□□□□ -0.74
CACNA1C-231ENST00000616390 DPH3P1Q9H4G8 78 aa10.42□□□□□ -0.74
CACNA1C-231ENST00000616390 BEX4Q9NWD9 120 aaPredicted RBP10.42□□□□□ -0.74
CACNA1C-231ENST00000616390 NF1P21359 2839 aa10.42□□□□□ -0.74
CACNA1C-231ENST00000616390 IGHV4-4A0A075B6R2 117 aa10.42□□□□□ -0.74
CACNA1C-231ENST00000616390 DPM2O94777 84 aa10.42□□□□□ -0.74
CACNA1C-231ENST00000616390 FAM159AQ6UWV7 190 aa10.42□□□□□ -0.74
CACNA1C-231ENST00000616390 TM2D2Q9BX73 214 aa10.42□□□□□ -0.74
CACNA1C-231ENST00000616390 CCDC168Q8NDH2 2452 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 NOTCH3Q9UM47 2321 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 F5H697 171 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 PSMB8P28062 276 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 TIRAPP58753 221 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 SUMO2P61956 95 aaKnown RBP10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 CFHR3Q02985 330 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 FAM19A5Q7Z5A7 132 aaPredicted RBP10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 AP1S3Q96PC3 154 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 NBPF19A0A087WUL8 3843 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 LINC01546A6NGU7 62 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 ATP5LO75964 103 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 GCSHP23434 173 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 FAM74A4Q5TZK3 123 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 OR13C6PQ8NH95 151 aa10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 SPAG8Q99932 426 aaPredicted RBP10.41□□□□□ -0.74
CACNA1C-231ENST00000616390 SCGB3A1Q96QR1 104 aa10.4□□□□□ -0.74
CACNA1C-231ENST00000616390 JMJD8Q96S16 334 aa10.4□□□□□ -0.74
CACNA1C-231ENST00000616390 H3BUT2 72 aa10.4□□□□□ -0.74
CACNA1C-231ENST00000616390 HTN1P15515 57 aa10.4□□□□□ -0.74
CACNA1C-231ENST00000616390 KRTAP10-9P60411 292 aa10.4□□□□□ -0.74
CACNA1C-231ENST00000616390 ADAMTSL5Q6ZMM2 481 aa10.4□□□□□ -0.74
CACNA1C-231ENST00000616390 DCANP1Q8TF63 244 aa10.4□□□□□ -0.74
CACNA1C-231ENST00000616390 BBC3Q96PG8 261 aaPredicted RBP10.4□□□□□ -0.74
CACNA1C-231ENST00000616390 C9orf118A6NHY6 69 aa10.39□□□□□ -0.75
CACNA1C-231ENST00000616390 MT-ATP8P03928 68 aa10.39□□□□□ -0.75
CACNA1C-231ENST00000616390 A0A0U1RRA0 63 aa10.39□□□□□ -0.75
CACNA1C-231ENST00000616390 COX6B1P14854 86 aa10.39□□□□□ -0.75
CACNA1C-231ENST00000616390 DEFB136Q30KP8 78 aa10.39□□□□□ -0.75
CACNA1C-231ENST00000616390 CHD6Q8TD26 2715 aa10.39□□□□□ -0.75
CACNA1C-231ENST00000616390 FAM19A4Q96LR4 140 aa10.39□□□□□ -0.75
CACNA1C-231ENST00000616390 ZMAT4Q9H898 229 aa10.39□□□□□ -0.75
CACNA1C-231ENST00000616390 SPANXB1Q9NS25 103 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-231ENST00000616390 PRRC2AP48634 2157 aaKnown RBP10.38□□□□□ -0.75
CACNA1C-231ENST00000616390 A6NDN8 102 aa10.38□□□□□ -0.75
CACNA1C-231ENST00000616390 SLC25A16P16260 332 aa10.38□□□□□ -0.75
CACNA1C-231ENST00000616390 SEC11AP67812 179 aa10.38□□□□□ -0.75
CACNA1C-231ENST00000616390 SPINK13Q1W4C9 94 aa10.38□□□□□ -0.75
CACNA1C-231ENST00000616390 IGHV4OR15-8A0A075B7B6 117 aa10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 A0A087WW49 117 aa10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 HOXA3O43365 443 aaPredicted RBP10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 MAPKAPK5-AS1Q8N8E1 139 aa10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 DUX3Q96PT4 197 aa10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 V9GYY9 64 aa10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 EMP1P54849 157 aa10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 DSCR9P59020 149 aa10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 ZFAND6Q6FIF0 208 aa10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 C2orf66Q6UXQ4 117 aa10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 C18orf65Q6ZTR6 163 aa10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 MDFICQ9P1T7 246 aa10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 NACAE9PAV3 2078 aa10.37□□□□□ -0.75
CACNA1C-231ENST00000616390 TRBV25-1A0A075B6N4 114 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms