RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ATP6V0E1O15342 81 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 LINC01620Q4KN68 170 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 RNASE13Q5GAN3 156 aaKnown RBP5.08□□□□□ -1.6
LMO3-235ENST00000616247 TMEM219Q86XT9 240 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 LINC00477Q96M19 166 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 OTOGLQ3ZCN5 2332 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 TRAV8-3A0A0A6YYJ7 113 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 RBAKDNA6NC62 111 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 H3BMM0 161 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 IGHV3-30P01768 117 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 IGHV3-30-5P0DP03 117 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 ATXN8Q156A1 80 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 VMO1Q7Z5L0 202 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 UBE2WQ96B02 151 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 CHCHD5Q9BSY4 110 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 SDHAF1A6NFY7 115 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 RHODO00212 210 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 FOXC1Q12948 553 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 PAPPA-AS1Q5QFB9 102 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 UBTD1Q9HAC8 227 aa5.07□□□□□ -1.6
LMO3-235ENST00000616247 ASH1LQ9NR48 2969 aaKnown RBP5.07□□□□□ -1.6
LMO3-235ENST00000616247 IGHV7-81A0A0B4J1V7 117 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 ELANEP08246 267 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 COX6CP09669 75 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 NHLRC4P0CG21 123 aaPredicted RBP5.06□□□□□ -1.6
LMO3-235ENST00000616247 PF4V1P10720 104 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 RPL13AP40429 203 aaKnown RBP5.06□□□□□ -1.6
LMO3-235ENST00000616247 SLC25A29Q8N8R3 303 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 TMEM190Q8WZ59 177 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 IGHV3-73A0A0B4J1V6 119 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 A0A0J9YXV3 536 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 TNFRSF13BO14836 293 aaPredicted RBP5.06□□□□□ -1.6
LMO3-235ENST00000616247 IGHV3-33P01772 117 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 CLEC2BQ92478 149 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 EEF1AKMT3Q96AZ1 226 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 ZNF580Q9UK33 172 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 IGFL2Q6UWQ7 119 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 Q6ZSV7 163 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 ZNRF2Q8NHG8 242 aa5.06□□□□□ -1.6
LMO3-235ENST00000616247 LINC01546A6NGU7 62 aa5.05□□□□□ -1.6
LMO3-235ENST00000616247 VCYO14598 125 aa5.05□□□□□ -1.6
LMO3-235ENST00000616247 CRYGDP07320 174 aa5.05□□□□□ -1.6
LMO3-235ENST00000616247 COX8CQ7Z4L0 72 aa5.05□□□□□ -1.6
LMO3-235ENST00000616247 C20orf173Q96LM9 149 aa5.05□□□□□ -1.6
LMO3-235ENST00000616247 LY6LH3BQJ8 138 aa5.05□□□□□ -1.6
LMO3-235ENST00000616247 COX6B1P14854 86 aa5.05□□□□□ -1.6
LMO3-235ENST00000616247 SRSF2Q01130 221 aaKnown RBP5.05□□□□□ -1.6
LMO3-235ENST00000616247 PRR30Q53SZ7 412 aaPredicted RBP5.05□□□□□ -1.6
LMO3-235ENST00000616247 DAND5Q8N907 189 aa5.05□□□□□ -1.6
LMO3-235ENST00000616247 IGLV4-69A0A075B6H9 119 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 LINC01619G3V211 115 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 RS1O15537 224 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 PPP1R17O96001 155 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 GRNP28799 593 aaKnown RBP5.04□□□□□ -1.6
LMO3-235ENST00000616247 SUMO4Q6EEV6 95 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 Q6ZS92 163 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 NPBQ8NG41 125 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 ZNF625Q96I27 306 aaPredicted RBP5.04□□□□□ -1.6
LMO3-235ENST00000616247 TSHBP01222 138 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 CITED1Q99966 193 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 ZFAND3Q9H8U3 227 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 TRAV12-2A0A075B6T6 113 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.04□□□□□ -1.6
LMO3-235ENST00000616247 M0R2P5 195 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 TRIAP1O43715 76 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 UBE2E1P51965 193 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 LY6EQ16553 131 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 ZNF876PQ49A33 203 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 C9orf47Q6ZRZ4 202 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 CCDC140Q96MF4 163 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 DUX5Q96PT3 197 aa5.04□□□□□ -1.6
LMO3-235ENST00000616247 CLPSL1A2RUU4 121 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 A8MZ25 164 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 MRPL23Q16540 153 aaKnown RBP5.03□□□□□ -1.6
LMO3-235ENST00000616247 CEMP1Q6PRD7 247 aaPredicted RBP5.03□□□□□ -1.6
LMO3-235ENST00000616247 UNQ9165/PRO28630Q6UXU0 137 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 Q8N9W7 124 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 FAM236AA0A1B0GUQ0 79 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 FAM236BA0A1B0GV22 79 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 TRBV12-3P01733 135 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 CD28P10747 220 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 PLA2G2CQ5R387 149 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 C9orf139Q6ZV77 190 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 ZFAND2AQ8N6M9 145 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 FAM110DQ8TAY7 271 aaPredicted RBP5.03□□□□□ -1.6
LMO3-235ENST00000616247 SVEP1Q4LDE5 3571 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 MUC6Q6W4X9 2439 aa5.03□□□□□ -1.6
LMO3-235ENST00000616247 C9orf153Q5TBE3 101 aa5.02□□□□□ -1.61
LMO3-235ENST00000616247 PSMG3-AS1Q96PY0 264 aa5.02□□□□□ -1.61
LMO3-235ENST00000616247 TIMM21Q9BVV7 248 aa5.02□□□□□ -1.61
LMO3-235ENST00000616247 TRBV10-2A0A0K0K1G8 114 aa5.02□□□□□ -1.61
LMO3-235ENST00000616247 ZNF22P17026 224 aaPredicted RBP5.02□□□□□ -1.61
LMO3-235ENST00000616247 TMEM263Q8WUH6 116 aaKnown RBP5.02□□□□□ -1.61
LMO3-235ENST00000616247 TMEM141Q96I45 108 aa5.02□□□□□ -1.61
LMO3-235ENST00000616247 ODF3Q96PU9 254 aa5.02□□□□□ -1.61
LMO3-235ENST00000616247 KLK9Q9UKQ9 250 aa5.02□□□□□ -1.61
LMO3-235ENST00000616247 PRRC2AP48634 2157 aaKnown RBP5.02□□□□□ -1.61
LMO3-235ENST00000616247 TRGV11A0A075B6L2 103 aa5.02□□□□□ -1.61
LMO3-235ENST00000616247 IGIPA6NJ69 53 aa5.02□□□□□ -1.61
LMO3-235ENST00000616247 KNCNA6PVL3 124 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms