RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 H3BVH4 76 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 FSHBP01225 129 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 IL4P05112 153 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 C11orf44Q8N8P7 122 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 SORL1Q92673 2214 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 KIR2DL4Q99706 377 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 ESM1Q9NQ30 184 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 M0QXV9 152 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 CTSGP08311 255 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 LINC01559Q495D7 138 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 TEX29Q8N6K0 151 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 VCX2Q9H322 139 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 C2CD3Q4AC94 2353 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 LINC01546A6NGU7 62 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 TMEM190Q8WZ59 177 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 TMEM158Q8WZ71 300 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 TRGV9Q99603 122 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 C21orf62Q9NYP8 219 aa7.59□□□□□ -1.19
GGA3-221ENST00000614198 IGKV2-40A0A087WW87 121 aaPredicted RBP7.58□□□□□ -1.2
GGA3-221ENST00000614198 DPM2O94777 84 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 IGKV2D-40P01614 121 aaPredicted RBP7.58□□□□□ -1.2
GGA3-221ENST00000614198 CRIP1P50238 77 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 C18orf65Q6ZTR6 163 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 MAPKAPK5-AS1Q8N8E1 139 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 TMEM75Q8N9X5 138 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 MSRB1Q9NZV6 116 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 TRGV3P03979 118 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 GATA1P15976 413 aaPredicted RBP7.58□□□□□ -1.2
GGA3-221ENST00000614198 Q6YL49 198 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 MAST4O15021 2626 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 ATRQ13535 2644 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 ZFAND6Q6FIF0 208 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 SCGB1D4Q6XE38 83 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 ZNF491Q8N8L2 437 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 PPDPFQ9H3Y8 114 aa7.58□□□□□ -1.2
GGA3-221ENST00000614198 FBN1P35555 2871 aaKnown RBP7.57□□□□□ -1.2
GGA3-221ENST00000614198 TRBV7-3A0A075B6L6 115 aa7.57□□□□□ -1.2
GGA3-221ENST00000614198 LINC01619G3V211 115 aa7.57□□□□□ -1.2
GGA3-221ENST00000614198 ATP5LO75964 103 aa7.57□□□□□ -1.2
GGA3-221ENST00000614198 MORN3Q6PF18 240 aaPredicted RBP7.57□□□□□ -1.2
GGA3-221ENST00000614198 PPDPFLQ8WWR9 84 aa7.57□□□□□ -1.2
GGA3-221ENST00000614198 DLX4Q92988 240 aaPredicted RBP7.57□□□□□ -1.2
GGA3-221ENST00000614198 TMEM14CQ9P0S9 112 aa7.57□□□□□ -1.2
GGA3-221ENST00000614198 J3QLI3 93 aa7.57□□□□□ -1.2
GGA3-221ENST00000614198 SH2D1AO60880 128 aa7.57□□□□□ -1.2
GGA3-221ENST00000614198 IGHG2P01859 326 aa7.57□□□□□ -1.2
GGA3-221ENST00000614198 PSMB2P49721 201 aa7.57□□□□□ -1.2
GGA3-221ENST00000614198 SRSF9Q13242 221 aaKnown RBP eCLIP7.57□□□□□ -1.2
GGA3-221ENST00000614198 FAM110DQ8TAY7 271 aaPredicted RBP7.57□□□□□ -1.2
GGA3-221ENST00000614198 MYOZ3Q8TDC0 251 aa7.56□□□□□ -1.2
GGA3-221ENST00000614198 DUX3Q96PT4 197 aa7.56□□□□□ -1.2
GGA3-221ENST00000614198 TNFRSF18Q9Y5U5 241 aa7.56□□□□□ -1.2
GGA3-221ENST00000614198 C19orf54Q5BKX5 351 aa7.56□□□□□ -1.2
GGA3-221ENST00000614198 UNQ9165/PRO28630Q6UXU0 137 aa7.56□□□□□ -1.2
GGA3-221ENST00000614198 CARD19Q96LW7 228 aa7.56□□□□□ -1.2
GGA3-221ENST00000614198 MFAP4P55083 255 aa7.56□□□□□ -1.2
GGA3-221ENST00000614198 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 NHLRC4P0CG21 123 aaPredicted RBP7.55□□□□□ -1.2
GGA3-221ENST00000614198 SCGB1C2P0DMR2 95 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 DEFB136Q30KP8 78 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 DEFB104AQ8WTQ1 72 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 RNF125Q96EQ8 232 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 MRPL35Q9NZE8 188 aaKnown RBP7.55□□□□□ -1.2
GGA3-221ENST00000614198 VPREB3Q9UKI3 123 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 GAGE12JA6NER3 117 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 GAGE7O76087 117 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 GAGE12FP0CL80 117 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 GAGE12GP0CL81 117 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 GAGE12IP0CL82 117 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 GAGE4Q13068 117 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 TTC32Q5I0X7 151 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 IGKV3-7A0A075B6H7 116 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 TRBV19A0A075B6N1 114 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 LY6G6DO95868 133 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 TEN1Q86WV5 123 aa7.55□□□□□ -1.2
GGA3-221ENST00000614198 HLA-DMBP28068 263 aa7.54□□□□□ -1.2
GGA3-221ENST00000614198 ZNF702PQ9H963 129 aa7.54□□□□□ -1.2
GGA3-221ENST00000614198 NXT2Q9NPJ8 142 aaKnown RBP7.54□□□□□ -1.2
GGA3-221ENST00000614198 IGF1P05019 195 aa7.54□□□□□ -1.2
GGA3-221ENST00000614198 DNAJC9-AS1A6NH13 148 aa7.53□□□□□ -1.2
GGA3-221ENST00000614198 SRD5A1P18405 259 aa7.53□□□□□ -1.2
GGA3-221ENST00000614198 INAFM1C9JVW0 142 aa7.53□□□□□ -1.2
GGA3-221ENST00000614198 TMEM262E9PQX1 116 aa7.53□□□□□ -1.2
GGA3-221ENST00000614198 TNFRSF6BO95407 300 aa7.53□□□□□ -1.2
GGA3-221ENST00000614198 ZNF688P0C7X2 276 aa7.53□□□□□ -1.2
GGA3-221ENST00000614198 MRPL23Q16540 153 aaKnown RBP7.53□□□□□ -1.2
GGA3-221ENST00000614198 TRAV26-2A0A0B4J265 109 aa7.53□□□□□ -1.2
GGA3-221ENST00000614198 H7C2G1 150 aa7.53□□□□□ -1.2
GGA3-221ENST00000614198 DEFB1P60022 68 aa7.53□□□□□ -1.2
GGA3-221ENST00000614198 RAX2Q96IS3 184 aa7.53□□□□□ -1.2
GGA3-221ENST00000614198 PKD1L1Q8TDX9 2849 aa7.52□□□□□ -1.21
GGA3-221ENST00000614198 CLPSL1A2RUU4 121 aa7.52□□□□□ -1.21
GGA3-221ENST00000614198 RHODO00212 210 aa7.52□□□□□ -1.21
GGA3-221ENST00000614198 FAM159AQ6UWV7 190 aa7.52□□□□□ -1.21
GGA3-221ENST00000614198 LYPD1Q8N2G4 141 aa7.52□□□□□ -1.21
GGA3-221ENST00000614198 SIGLEC15Q6ZMC9 328 aa7.52□□□□□ -1.21
GGA3-221ENST00000614198 SBSPONQ8IVN8 264 aa7.52□□□□□ -1.21
GGA3-221ENST00000614198 RNF185Q96GF1 192 aa7.52□□□□□ -1.21
GGA3-221ENST00000614198 CFHR3Q02985 330 aa7.52□□□□□ -1.21
GGA3-221ENST00000614198 SMAD5-AS1Q9Y6J3 95 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms