RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 AP1S3Q96PC3 154 aa8.2□□□□□ -1.1
SLIRP-212ENST00000613856 TMEM191AQ9H0A3 160 aa8.2□□□□□ -1.1
SLIRP-212ENST00000613856 MSRB1Q9NZV6 116 aa8.2□□□□□ -1.1
SLIRP-212ENST00000613856 NACAE9PAV3 2078 aa8.2□□□□□ -1.1
SLIRP-212ENST00000613856 LGALS9BQ3B8N2 356 aa8.19□□□□□ -1.1
SLIRP-212ENST00000613856 ZNF876PQ49A33 203 aa8.19□□□□□ -1.1
SLIRP-212ENST00000613856 SMIM15Q7Z3B0 74 aa8.19□□□□□ -1.1
SLIRP-212ENST00000613856 RASL10AQ92737 203 aa8.19□□□□□ -1.1
SLIRP-212ENST00000613856 OVOL2Q9BRP0 275 aa8.19□□□□□ -1.1
SLIRP-212ENST00000613856 PHOX2AO14813 284 aa8.18□□□□□ -1.1
SLIRP-212ENST00000613856 RAB4BP61018 213 aa8.18□□□□□ -1.1
SLIRP-212ENST00000613856 Q8NAQ8 132 aa8.18□□□□□ -1.1
SLIRP-212ENST00000613856 MRPL18Q9H0U6 180 aaKnown RBP8.18□□□□□ -1.1
SLIRP-212ENST00000613856 TRAPPC1Q9Y5R8 145 aa8.18□□□□□ -1.1
SLIRP-212ENST00000613856 ALMS1Q8TCU4 4167 aa8.17□□□□□ -1.1
SLIRP-212ENST00000613856 IGHV4-28A0A0C4DH34 117 aa8.17□□□□□ -1.1
SLIRP-212ENST00000613856 A8MWV9 139 aa8.17□□□□□ -1.1
SLIRP-212ENST00000613856 TRGC2P03986 189 aa8.17□□□□□ -1.1
SLIRP-212ENST00000613856 SLAQ13239 276 aa8.17□□□□□ -1.1
SLIRP-212ENST00000613856 FAM104BQ5XKR9 115 aa8.17□□□□□ -1.1
SLIRP-212ENST00000613856 TM2D3Q9BRN9 247 aa8.17□□□□□ -1.1
SLIRP-212ENST00000613856 DPH3P1Q9H4G8 78 aa8.17□□□□□ -1.1
SLIRP-212ENST00000613856 KIF25-AS1Q9Y6Z4 181 aa8.17□□□□□ -1.1
SLIRP-212ENST00000613856 LYRM9A8MSI8 78 aa8.16□□□□□ -1.1
SLIRP-212ENST00000613856 APCSP02743 223 aa8.16□□□□□ -1.1
SLIRP-212ENST00000613856 EVI2AP22794 236 aa8.16□□□□□ -1.1
SLIRP-212ENST00000613856 SSTP61278 116 aa8.16□□□□□ -1.1
SLIRP-212ENST00000613856 FABP9Q0Z7S8 132 aa8.16□□□□□ -1.1
SLIRP-212ENST00000613856 LINC00612Q8N6U2 182 aa8.16□□□□□ -1.1
SLIRP-212ENST00000613856 POM121L12Q8N7R1 296 aa8.16□□□□□ -1.1
SLIRP-212ENST00000613856 FRZBQ92765 325 aa8.16□□□□□ -1.1
SLIRP-212ENST00000613856 RNF185Q96GF1 192 aa8.16□□□□□ -1.1
SLIRP-212ENST00000613856 SPATA25Q9BR10 227 aa8.16□□□□□ -1.1
SLIRP-212ENST00000613856 ZMAT4Q9H898 229 aa8.16□□□□□ -1.1
SLIRP-212ENST00000613856 NOP10Q9NPE3 64 aaKnown RBP8.16□□□□□ -1.1
SLIRP-212ENST00000613856 MRPL16Q9NX20 251 aaKnown RBP8.16□□□□□ -1.1
SLIRP-212ENST00000613856 TRGV1A0A0A0MS02 117 aa8.15□□□□□ -1.1
SLIRP-212ENST00000613856 C1orf196B1AJZ1 125 aa8.15□□□□□ -1.1
SLIRP-212ENST00000613856 RHODO00212 210 aa8.15□□□□□ -1.1
SLIRP-212ENST00000613856 RS1O15537 224 aa8.15□□□□□ -1.1
SLIRP-212ENST00000613856 SMIM17P0DL12 118 aa8.15□□□□□ -1.1
SLIRP-212ENST00000613856 Q6ZTI0 123 aa8.15□□□□□ -1.1
SLIRP-212ENST00000613856 AMN1Q8IY45 258 aa8.15□□□□□ -1.1
SLIRP-212ENST00000613856 C14orf178Q8N769 122 aaPredicted RBP8.15□□□□□ -1.1
SLIRP-212ENST00000613856 C18orf15Q96N68 181 aa8.15□□□□□ -1.1
SLIRP-212ENST00000613856 C11orf68Q9H3H3 251 aaKnown RBP8.15□□□□□ -1.1
SLIRP-212ENST00000613856 RETNQ9HD89 108 aa8.15□□□□□ -1.1
SLIRP-212ENST00000613856 TRAV4A0A0B4J268 109 aa8.14□□□□□ -1.11
SLIRP-212ENST00000613856 TEX48A0A1B0GUV7 120 aa8.14□□□□□ -1.11
SLIRP-212ENST00000613856 CRYGDP07320 174 aa8.14□□□□□ -1.11
SLIRP-212ENST00000613856 RAB4AP20338 218 aa8.14□□□□□ -1.11
SLIRP-212ENST00000613856 LINC00315P59091 139 aa8.14□□□□□ -1.11
SLIRP-212ENST00000613856 MRPL51Q4U2R6 128 aaKnown RBP8.14□□□□□ -1.11
SLIRP-212ENST00000613856 CFAP126Q5VTH2 177 aa8.14□□□□□ -1.11
SLIRP-212ENST00000613856 UFSP1Q6NVU6 142 aa8.14□□□□□ -1.11
SLIRP-212ENST00000613856 MRAP2Q96G30 205 aa8.14□□□□□ -1.11
SLIRP-212ENST00000613856 JPT2Q9H910 190 aa8.14□□□□□ -1.11
SLIRP-212ENST00000613856 CIDEAO60543 219 aa8.13□□□□□ -1.11
SLIRP-212ENST00000613856 PPBPP02775 128 aa8.13□□□□□ -1.11
SLIRP-212ENST00000613856 ZFP2Q6ZN57 461 aa8.13□□□□□ -1.11
SLIRP-212ENST00000613856 DKK2Q9UBU2 259 aa8.13□□□□□ -1.11
SLIRP-212ENST00000613856 A0A087WWL8 130 aa8.12□□□□□ -1.11
SLIRP-212ENST00000613856 MGPP08493 103 aa8.12□□□□□ -1.11
SLIRP-212ENST00000613856 EMP1P54849 157 aa8.12□□□□□ -1.11
SLIRP-212ENST00000613856 RAB5BP61020 215 aa8.12□□□□□ -1.11
SLIRP-212ENST00000613856 KIAA1644Q3SXP7 199 aa8.12□□□□□ -1.11
SLIRP-212ENST00000613856 FAM222AQ5U5X8 452 aa8.12□□□□□ -1.11
SLIRP-212ENST00000613856 ORMDL3Q8N138 153 aa8.12□□□□□ -1.11
SLIRP-212ENST00000613856 ALKBH7Q9BT30 221 aaPredicted RBP8.12□□□□□ -1.11
SLIRP-212ENST00000613856 SAMD10Q9BYL1 202 aa8.12□□□□□ -1.11
SLIRP-212ENST00000613856 LAMTOR2Q9Y2Q5 125 aa8.12□□□□□ -1.11
SLIRP-212ENST00000613856 GAGE12BA1L429 117 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 D6R8Y8 96 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 HIST1H2BKO60814 126 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 GAGE7O76087 117 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 HIST1H2BJP06899 126 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 GAGE12FP0CL80 117 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 GAGE12GP0CL81 117 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 GAGE12IP0CL82 117 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 HIST1H2BOP23527 126 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 SRIP30626 198 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 HIST1H2BBP33778 126 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 HIST1H2BDP58876 126 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 HIST1H2BCP62807 126 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 HIST2H2BEQ16778 126 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.11□□□□□ -1.11
SLIRP-212ENST00000613856 FAM74A4Q5TZK3 123 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 OR4C5Q8NGB2 326 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 HIST1H2BHQ93079 126 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 HIST1H2BNQ99877 126 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 HIST1H2BMQ99879 126 aa8.11□□□□□ -1.11
SLIRP-212ENST00000613856 TRGV2A0A075B6R0 118 aa8.1□□□□□ -1.11
SLIRP-212ENST00000613856 DEFB4AO15263 64 aa8.1□□□□□ -1.11
SLIRP-212ENST00000613856 SPART-AS1P0CW21 52 aa8.1□□□□□ -1.11
SLIRP-212ENST00000613856 CKS2P33552 79 aa8.1□□□□□ -1.11
SLIRP-212ENST00000613856 ZNF56Q15929 161 aa8.1□□□□□ -1.11
SLIRP-212ENST00000613856 SUMO4Q6EEV6 95 aa8.1□□□□□ -1.11
SLIRP-212ENST00000613856 PRELID3AQ96N28 172 aa8.1□□□□□ -1.11
SLIRP-212ENST00000613856 CELA1Q9UNI1 258 aa8.1□□□□□ -1.11
SLIRP-212ENST00000613856 KIAA1109Q2LD37 5005 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms