RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 IGKV3-7A0A075B6H7 116 aa12.47□□□□□ -0.41
CNOT3-208ENST00000613073 USMG5Q96IX5 58 aa12.47□□□□□ -0.41
CNOT3-208ENST00000613073 MYMXA0A1B0GTQ4 84 aa12.47□□□□□ -0.41
CNOT3-208ENST00000613073 PSMG4Q5JS54 123 aa12.47□□□□□ -0.41
CNOT3-208ENST00000613073 ZNF575Q86XF7 245 aa12.47□□□□□ -0.41
CNOT3-208ENST00000613073 C16orf92Q96LL3 132 aa12.47□□□□□ -0.41
CNOT3-208ENST00000613073 A0A087WX48 190 aa12.47□□□□□ -0.41
CNOT3-208ENST00000613073 SCGB1D4Q6XE38 83 aa12.47□□□□□ -0.41
CNOT3-208ENST00000613073 TRBV20-1A0A075B6N2 111 aa12.46□□□□□ -0.41
CNOT3-208ENST00000613073 IGLV1-40P01703 118 aa12.46□□□□□ -0.41
CNOT3-208ENST00000613073 RPL11P62913 178 aaKnown RBP12.46□□□□□ -0.41
CNOT3-208ENST00000613073 SRSF9Q13242 221 aaKnown RBP eCLIP12.46□□□□□ -0.41
CNOT3-208ENST00000613073 Q8N8P6 123 aa12.46□□□□□ -0.41
CNOT3-208ENST00000613073 CR1P17927 2039 aa12.46□□□□□ -0.42
CNOT3-208ENST00000613073 IGHV4-31P0DP07 118 aa12.46□□□□□ -0.42
CNOT3-208ENST00000613073 GAGE5Q13069 117 aa12.46□□□□□ -0.42
CNOT3-208ENST00000613073 GAGE6Q13070 117 aa12.46□□□□□ -0.42
CNOT3-208ENST00000613073 AGPAT4-IT1Q9H0P7 198 aa12.46□□□□□ -0.42
CNOT3-208ENST00000613073 H3BUA1 57 aa12.45□□□□□ -0.42
CNOT3-208ENST00000613073 NDUFA4O00483 81 aa12.45□□□□□ -0.42
CNOT3-208ENST00000613073 LGALS1P09382 135 aaKnown RBP12.45□□□□□ -0.42
CNOT3-208ENST00000613073 DEFB113Q30KQ7 82 aa12.45□□□□□ -0.42
CNOT3-208ENST00000613073 ZFAND6Q6FIF0 208 aa12.45□□□□□ -0.42
CNOT3-208ENST00000613073 PLEKHB2Q96CS7 222 aa12.45□□□□□ -0.42
CNOT3-208ENST00000613073 PRRC2AP48634 2157 aaKnown RBP12.45□□□□□ -0.42
CNOT3-208ENST00000613073 LAGE3Q14657 143 aa12.45□□□□□ -0.42
CNOT3-208ENST00000613073 TEX29Q8N6K0 151 aa12.45□□□□□ -0.42
CNOT3-208ENST00000613073 ATP6V0E2Q8NHE4 81 aa12.45□□□□□ -0.42
CNOT3-208ENST00000613073 PPDPFLQ8WWR9 84 aa12.45□□□□□ -0.42
CNOT3-208ENST00000613073 DEFB1P60022 68 aa12.44□□□□□ -0.42
CNOT3-208ENST00000613073 TMEM78Q5T7P6 136 aa12.44□□□□□ -0.42
CNOT3-208ENST00000613073 COX8CQ7Z4L0 72 aa12.44□□□□□ -0.42
CNOT3-208ENST00000613073 SONP18583 2426 aaKnown RBP12.44□□□□□ -0.42
CNOT3-208ENST00000613073 MYO9AB2RTY4 2548 aa12.44□□□□□ -0.42
CNOT3-208ENST00000613073 IGLV2-18A0A075B6J9 118 aa12.44□□□□□ -0.42
CNOT3-208ENST00000613073 J3QLI3 93 aa12.44□□□□□ -0.42
CNOT3-208ENST00000613073 EDN2P20800 178 aa12.44□□□□□ -0.42
CNOT3-208ENST00000613073 ZNF815PA8K554 130 aa12.43□□□□□ -0.42
CNOT3-208ENST00000613073 CFHR3Q02985 330 aa12.43□□□□□ -0.42
CNOT3-208ENST00000613073 HIST2H2BCQ6DN03 193 aa12.43□□□□□ -0.42
CNOT3-208ENST00000613073 TEN1Q86WV5 123 aa12.43□□□□□ -0.42
CNOT3-208ENST00000613073 C20orf173Q96LM9 149 aa12.43□□□□□ -0.42
CNOT3-208ENST00000613073 Q96MF0 132 aa12.43□□□□□ -0.42
CNOT3-208ENST00000613073 FABP5P3A8MUU1 101 aa12.43□□□□□ -0.42
CNOT3-208ENST00000613073 TCL1BO95988 128 aa12.43□□□□□ -0.42
CNOT3-208ENST00000613073 KLHL30-AS1Q8NEE0 82 aa12.43□□□□□ -0.42
CNOT3-208ENST00000613073 DEFB104AQ8WTQ1 72 aa12.43□□□□□ -0.42
CNOT3-208ENST00000613073 ITPR3Q14573 2671 aa12.43□□□□□ -0.42
CNOT3-208ENST00000613073 Q6ZQT7 251 aa12.42□□□□□ -0.42
CNOT3-208ENST00000613073 GPHB5Q86YW7 130 aa12.42□□□□□ -0.42
CNOT3-208ENST00000613073 J3KRW8 73 aa12.42□□□□□ -0.42
CNOT3-208ENST00000613073 SPRY2O43597 315 aa12.42□□□□□ -0.42
CNOT3-208ENST00000613073 SRD5A1P18405 259 aa12.42□□□□□ -0.42
CNOT3-208ENST00000613073 PLNP26678 52 aa12.42□□□□□ -0.42
CNOT3-208ENST00000613073 HERV-K104P63124 156 aa12.42□□□□□ -0.42
CNOT3-208ENST00000613073 ANKRD29Q8N6D5 301 aa12.42□□□□□ -0.42
CNOT3-208ENST00000613073 DUX5Q96PT3 197 aa12.42□□□□□ -0.42
CNOT3-208ENST00000613073 PRADC1Q9BSG0 188 aa12.42□□□□□ -0.42
CNOT3-208ENST00000613073 BEX4Q9NWD9 120 aaPredicted RBP12.42□□□□□ -0.42
CNOT3-208ENST00000613073 RBAKDNA6NC62 111 aa12.41□□□□□ -0.42
CNOT3-208ENST00000613073 F8VRH5 84 aa12.41□□□□□ -0.42
CNOT3-208ENST00000613073 BRI3O95415 125 aa12.41□□□□□ -0.42
CNOT3-208ENST00000613073 SMIM20Q8N5G0 67 aa12.41□□□□□ -0.42
CNOT3-208ENST00000613073 LINC01546A6NGU7 62 aa12.41□□□□□ -0.42
CNOT3-208ENST00000613073 ZNF688P0C7X2 276 aa12.41□□□□□ -0.42
CNOT3-208ENST00000613073 EMP1P54849 157 aa12.41□□□□□ -0.42
CNOT3-208ENST00000613073 RHPN1-AS1Q9BWJ2 59 aa12.41□□□□□ -0.42
CNOT3-208ENST00000613073 H7C1H1 209 aa12.4□□□□□ -0.42
CNOT3-208ENST00000613073 NHLRC4P0CG21 123 aaPredicted RBP12.4□□□□□ -0.42
CNOT3-208ENST00000613073 SCGB1C2P0DMR2 95 aa12.4□□□□□ -0.42
CNOT3-208ENST00000613073 PSMB8P28062 276 aa12.4□□□□□ -0.42
CNOT3-208ENST00000613073 A8MWV9 139 aa12.4□□□□□ -0.43
CNOT3-208ENST00000613073 CCDC179H3BU77 68 aa12.4□□□□□ -0.43
CNOT3-208ENST00000613073 C11orf21Q9P2W6 132 aa12.4□□□□□ -0.43
CNOT3-208ENST00000613073 C9orf139Q6ZV77 190 aa12.39□□□□□ -0.43
CNOT3-208ENST00000613073 NRACQ8N912 160 aa12.39□□□□□ -0.43
CNOT3-208ENST00000613073 SCGB3A1Q96QR1 104 aa12.39□□□□□ -0.43
CNOT3-208ENST00000613073 VPREB3Q9UKI3 123 aa12.39□□□□□ -0.43
CNOT3-208ENST00000613073 DAZ1Q9NQZ3 744 aaKnown RBP12.38□□□□□ -0.43
CNOT3-208ENST00000613073 FLNAP21333 2647 aaKnown RBP12.38□□□□□ -0.43
CNOT3-208ENST00000613073 IGKV3D-20A0A0C4DH25 116 aa12.38□□□□□ -0.43
CNOT3-208ENST00000613073 IGHV7-4-1A0A0J9YVY3 117 aa12.38□□□□□ -0.43
CNOT3-208ENST00000613073 TRBV7-9A0A0J9YWB2 115 aa12.38□□□□□ -0.43
CNOT3-208ENST00000613073 F6UB75 175 aa12.38□□□□□ -0.43
CNOT3-208ENST00000613073 C9orf47Q6ZRZ4 202 aa12.38□□□□□ -0.43
CNOT3-208ENST00000613073 MRPL53Q96EL3 112 aaKnown RBP12.38□□□□□ -0.43
CNOT3-208ENST00000613073 HELZ2Q9BYK8 2649 aaKnown RBP12.37□□□□□ -0.43
CNOT3-208ENST00000613073 Q6YL49 198 aa12.37□□□□□ -0.43
CNOT3-208ENST00000613073 H7C2G1 150 aa12.37□□□□□ -0.43
CNOT3-208ENST00000613073 CRLF1O75462 422 aa12.37□□□□□ -0.43
CNOT3-208ENST00000613073 UBE2D3P61077 147 aa12.37□□□□□ -0.43
CNOT3-208ENST00000613073 UBE2D2P62837 147 aa12.37□□□□□ -0.43
CNOT3-208ENST00000613073 NF1P21359 2839 aa12.37□□□□□ -0.43
CNOT3-208ENST00000613073 TRAV4A0A0B4J268 109 aa12.36□□□□□ -0.43
CNOT3-208ENST00000613073 FSHBP01225 129 aa12.36□□□□□ -0.43
CNOT3-208ENST00000613073 UBE2D1P51668 147 aa12.36□□□□□ -0.43
CNOT3-208ENST00000613073 LINC01559Q495D7 138 aa12.36□□□□□ -0.43
CNOT3-208ENST00000613073 PRR9Q5T870 116 aa12.36□□□□□ -0.43
CNOT3-208ENST00000613073 CNFNQ9BYD5 112 aa12.36□□□□□ -0.43
CNOT3-208ENST00000613073 CUBNO60494 3623 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 386.4 ms