RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 SMIM20Q8N5G0 67 aa12.46□□□□□ -0.41
TSKU-205ENST00000612930 C15orf53Q8NAA6 179 aa12.46□□□□□ -0.41
TSKU-205ENST00000612930 LINC01600Q96MT4 127 aa12.46□□□□□ -0.41
TSKU-205ENST00000612930 IGHV4OR15-8A0A075B7B6 117 aa12.45□□□□□ -0.42
TSKU-205ENST00000612930 A0A087WW49 117 aa12.45□□□□□ -0.42
TSKU-205ENST00000612930 G3V318 75 aa12.45□□□□□ -0.42
TSKU-205ENST00000612930 IGHV4-39P01824 125 aa12.45□□□□□ -0.42
TSKU-205ENST00000612930 CD3EP07766 207 aa12.45□□□□□ -0.42
TSKU-205ENST00000612930 RPL13AP40429 203 aaKnown RBP12.45□□□□□ -0.42
TSKU-205ENST00000612930 FAM159AQ6UWV7 190 aa12.45□□□□□ -0.42
TSKU-205ENST00000612930 TRAV8-4A0A0B4J246 113 aa12.45□□□□□ -0.42
TSKU-205ENST00000612930 ATXN8Q156A1 80 aa12.45□□□□□ -0.42
TSKU-205ENST00000612930 C9orf139Q6ZV77 190 aa12.45□□□□□ -0.42
TSKU-205ENST00000612930 JPT2Q9H910 190 aa12.45□□□□□ -0.42
TSKU-205ENST00000612930 RNASE4P34096 147 aaKnown RBP12.44□□□□□ -0.42
TSKU-205ENST00000612930 LEPROTO15243 131 aa12.43□□□□□ -0.42
TSKU-205ENST00000612930 SUMO4Q6EEV6 95 aa12.43□□□□□ -0.42
TSKU-205ENST00000612930 EEF1AKMT3Q96AZ1 226 aa12.43□□□□□ -0.42
TSKU-205ENST00000612930 CACNA1BQ00975 2339 aa12.43□□□□□ -0.42
TSKU-205ENST00000612930 TRBV10-2A0A0K0K1G8 114 aa12.43□□□□□ -0.42
TSKU-205ENST00000612930 TMEM223A0PJW6 202 aa12.43□□□□□ -0.42
TSKU-205ENST00000612930 NXPH4O95158 308 aa12.43□□□□□ -0.42
TSKU-205ENST00000612930 Q1RN00 199 aa12.43□□□□□ -0.42
TSKU-205ENST00000612930 OPRPNQ99935 248 aaPredicted RBP12.43□□□□□ -0.42
TSKU-205ENST00000612930 BEX4Q9NWD9 120 aaPredicted RBP12.43□□□□□ -0.42
TSKU-205ENST00000612930 OOSP1A8MZH6 123 aa12.42□□□□□ -0.42
TSKU-205ENST00000612930 VCYO14598 125 aa12.42□□□□□ -0.42
TSKU-205ENST00000612930 OR10J6PQ8NGY7 276 aa12.42□□□□□ -0.42
TSKU-205ENST00000612930 FAM19A4Q96LR4 140 aa12.42□□□□□ -0.42
TSKU-205ENST00000612930 IGHV3-64A0A075B6Q5 118 aa12.41□□□□□ -0.42
TSKU-205ENST00000612930 LRBAP50851 2863 aa12.41□□□□□ -0.42
TSKU-205ENST00000612930 SDHAF1A6NFY7 115 aa12.41□□□□□ -0.42
TSKU-205ENST00000612930 F6UB75 175 aa12.41□□□□□ -0.42
TSKU-205ENST00000612930 LGALS9O00182 355 aa12.41□□□□□ -0.42
TSKU-205ENST00000612930 TRIAP1O43715 76 aa12.41□□□□□ -0.42
TSKU-205ENST00000612930 C1orf122Q6ZSJ8 110 aa12.41□□□□□ -0.42
TSKU-205ENST00000612930 TRBV7-1A0A0A6YYK4 115 aa12.4□□□□□ -0.42
TSKU-205ENST00000612930 H3BMM0 161 aa12.4□□□□□ -0.42
TSKU-205ENST00000612930 UBE2WQ96B02 151 aa12.4□□□□□ -0.42
TSKU-205ENST00000612930 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.4□□□□□ -0.42
TSKU-205ENST00000612930 TRBV30A0A0K0K1B3 111 aa12.4□□□□□ -0.42
TSKU-205ENST00000612930 SOCS3O14543 225 aa12.4□□□□□ -0.42
TSKU-205ENST00000612930 OVOL1O14753 267 aa12.4□□□□□ -0.42
TSKU-205ENST00000612930 MINOS1Q5TGZ0 78 aa12.4□□□□□ -0.42
TSKU-205ENST00000612930 LINC01560Q8TB33 94 aa12.4□□□□□ -0.42
TSKU-205ENST00000612930 BSNQ9UPA5 3926 aa12.4□□□□□ -0.42
TSKU-205ENST00000612930 MINOS1-NBL1R4GNA1 71 aa12.4□□□□□ -0.42
TSKU-205ENST00000612930 A0A087WWL8 130 aa12.39□□□□□ -0.43
TSKU-205ENST00000612930 M0R2P5 195 aa12.39□□□□□ -0.43
TSKU-205ENST00000612930 ZNF580Q9UK33 172 aa12.39□□□□□ -0.43
TSKU-205ENST00000612930 PIEZO2Q9H5I5 2752 aa12.39□□□□□ -0.43
TSKU-205ENST00000612930 PRR30Q53SZ7 412 aaPredicted RBP12.39□□□□□ -0.43
TSKU-205ENST00000612930 APRG1Q8IVJ8 170 aa12.39□□□□□ -0.43
TSKU-205ENST00000612930 ZNF22P17026 224 aaPredicted RBP12.38□□□□□ -0.43
TSKU-205ENST00000612930 TRBV27A0A0K0K1C4 114 aa12.38□□□□□ -0.43
TSKU-205ENST00000612930 MDFICQ9P1T7 246 aa12.38□□□□□ -0.43
TSKU-205ENST00000612930 A0A0J9YXY3 114 aa12.37□□□□□ -0.43
TSKU-205ENST00000612930 F5H697 171 aa12.37□□□□□ -0.43
TSKU-205ENST00000612930 H7C423 109 aa12.37□□□□□ -0.43
TSKU-205ENST00000612930 C2orf82Q6UX34 121 aa12.37□□□□□ -0.43
TSKU-205ENST00000612930 ZNF256Q9Y2P7 627 aaPredicted RBP12.37□□□□□ -0.43
TSKU-205ENST00000612930 MEIG1Q5JSS6 88 aa12.36□□□□□ -0.43
TSKU-205ENST00000612930 UNQ9165/PRO28630Q6UXU0 137 aa12.36□□□□□ -0.43
TSKU-205ENST00000612930 IGHV1-69P01742 117 aa12.36□□□□□ -0.43
TSKU-205ENST00000612930 FOXC1Q12948 553 aa12.36□□□□□ -0.43
TSKU-205ENST00000612930 A0A0J9YX75 114 aa12.35□□□□□ -0.43
TSKU-205ENST00000612930 CACNA1HO95180 2353 aa12.35□□□□□ -0.43
TSKU-205ENST00000612930 IGF2-ASQ6U949 168 aa12.35□□□□□ -0.43
TSKU-205ENST00000612930 LITAFQ99732 161 aa12.35□□□□□ -0.43
TSKU-205ENST00000612930 A0A0J9YXV3 536 aa12.34□□□□□ -0.43
TSKU-205ENST00000612930 TRBV6-5A0A0K0K1A5 114 aa12.34□□□□□ -0.43
TSKU-205ENST00000612930 ZFP36P26651 326 aaKnown RBP12.34□□□□□ -0.43
TSKU-205ENST00000612930 SVEP1Q4LDE5 3571 aa12.34□□□□□ -0.43
TSKU-205ENST00000612930 ADARB2-AS1A8MUL3 147 aa12.34□□□□□ -0.43
TSKU-205ENST00000612930 UBE2E1P51965 193 aa12.34□□□□□ -0.43
TSKU-205ENST00000612930 ATMQ13315 3056 aa12.34□□□□□ -0.43
TSKU-205ENST00000612930 MRPL23Q16540 153 aaKnown RBP12.34□□□□□ -0.43
TSKU-205ENST00000612930 Q8NA96 180 aa12.34□□□□□ -0.43
TSKU-205ENST00000612930 ICOSQ9Y6W8 199 aa12.34□□□□□ -0.43
TSKU-205ENST00000612930 BRI3O95415 125 aa12.33□□□□□ -0.44
TSKU-205ENST00000612930 CHCHD5Q9BSY4 110 aa12.33□□□□□ -0.44
TSKU-205ENST00000612930 TRBV12-3P01733 135 aa12.33□□□□□ -0.44
TSKU-205ENST00000612930 ZNF56Q15929 161 aa12.33□□□□□ -0.44
TSKU-205ENST00000612930 NSUN5P1Q3KNT7 163 aa12.33□□□□□ -0.44
TSKU-205ENST00000612930 DUX3Q96PT4 197 aa12.33□□□□□ -0.44
TSKU-205ENST00000612930 GRNP28799 593 aaKnown RBP12.32□□□□□ -0.44
TSKU-205ENST00000612930 FAM74A4Q5TZK3 123 aa12.32□□□□□ -0.44
TSKU-205ENST00000612930 SIRPDQ9H106 197 aa12.32□□□□□ -0.44
TSKU-205ENST00000612930 SPANXA1Q9NS26 97 aa12.32□□□□□ -0.44
TSKU-205ENST00000612930 MED13LQ71F56 2210 aa12.32□□□□□ -0.44
TSKU-205ENST00000612930 IGKV3-7A0A075B6H7 116 aa12.32□□□□□ -0.44
TSKU-205ENST00000612930 H3BT86 120 aa12.32□□□□□ -0.44
TSKU-205ENST00000612930 Q6ZSV7 163 aa12.32□□□□□ -0.44
TSKU-205ENST00000612930 LINC00527Q9UJ94 153 aa12.32□□□□□ -0.44
TSKU-205ENST00000612930 ADAMTSL4-AS1Q5T5F5 129 aa12.31□□□□□ -0.44
TSKU-205ENST00000612930 CLEC2BQ92478 149 aa12.31□□□□□ -0.44
TSKU-205ENST00000612930 IGHV3-30-3P0DP02 117 aa12.31□□□□□ -0.44
TSKU-205ENST00000612930 C3orf56Q8N813 242 aa12.31□□□□□ -0.44
TSKU-205ENST00000612930 KLLNB2CW77 178 aa12.3□□□□□ -0.44
TSKU-205ENST00000612930 M0QY20 66 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms