RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 C11orf71Q6IPW1 123 aa8.4□□□□□ -1.07
FAM3A-221ENST00000612856 TET2Q6N021 2002 aaPredicted RBP8.4□□□□□ -1.07
FAM3A-221ENST00000612856 CEND1Q8N111 149 aa8.4□□□□□ -1.07
FAM3A-221ENST00000612856 TMEM158Q8WZ71 300 aa8.4□□□□□ -1.07
FAM3A-221ENST00000612856 FAM167A-AS1Q96KT0 104 aa8.4□□□□□ -1.07
FAM3A-221ENST00000612856 CSMD1Q96PZ7 3565 aa8.39□□□□□ -1.07
FAM3A-221ENST00000612856 ASIPP42127 132 aa8.39□□□□□ -1.07
FAM3A-221ENST00000612856 DLX4Q92988 240 aaPredicted RBP8.39□□□□□ -1.07
FAM3A-221ENST00000612856 A0A087WWL8 130 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 TRGV4A0A0C4DH28 118 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 A0A1B0GXF2 115 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 A6NJY4 79 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 A8MWV9 139 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 PATE2Q6UY27 113 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 FABP5P3A8MUU1 101 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 EIF4EBP1Q13541 118 aaPredicted RBP8.38□□□□□ -1.07
FAM3A-221ENST00000612856 LYRM7Q5U5X0 104 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 Q86TA4 180 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 TRGV9Q99603 122 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 MRPL35Q9NZE8 188 aaKnown RBP8.38□□□□□ -1.07
FAM3A-221ENST00000612856 RAI1Q7Z5J4 1906 aaPredicted RBP8.38□□□□□ -1.07
FAM3A-221ENST00000612856 IGHV4OR15-8A0A075B7B6 117 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 A0A087WW49 117 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 CGB3P0DN86 165 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 CGB7P0DN87 165 aa8.38□□□□□ -1.07
FAM3A-221ENST00000612856 CD28P10747 220 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 GATA1P15976 413 aaPredicted RBP8.37□□□□□ -1.07
FAM3A-221ENST00000612856 MRPL51Q4U2R6 128 aaKnown RBP8.37□□□□□ -1.07
FAM3A-221ENST00000612856 C5orf56Q8N8D9 126 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 C8orf49Q96NF6 230 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 C1QTNF4Q9BXJ3 329 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 FNDC10F2Z333 226 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 SHISA2Q6UWI4 295 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 DCHS2Q6V1P9 2916 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 MUC4Q99102 2169 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 ZNF815PA8K554 130 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 FGF6P10767 208 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 FOXI1Q12951 378 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 UNQ9165/PRO28630Q6UXU0 137 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 OTORQ9NRC9 128 aa8.37□□□□□ -1.07
FAM3A-221ENST00000612856 PRSS46E5RG02 174 aa8.36□□□□□ -1.07
FAM3A-221ENST00000612856 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
FAM3A-221ENST00000612856 SLC50A1Q9BRV3 221 aa8.36□□□□□ -1.07
FAM3A-221ENST00000612856 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
FAM3A-221ENST00000612856 PRSS2P07478 247 aa8.36□□□□□ -1.07
FAM3A-221ENST00000612856 FAM223BA6NKX1 122 aa8.36□□□□□ -1.07
FAM3A-221ENST00000612856 IGKV1-17P01599 117 aa8.36□□□□□ -1.07
FAM3A-221ENST00000612856 FAM104BQ5XKR9 115 aa8.36□□□□□ -1.07
FAM3A-221ENST00000612856 FAM223AQ8IWN6 122 aa8.36□□□□□ -1.07
FAM3A-221ENST00000612856 UBE2L6O14933 153 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 ZNF491Q8N8L2 437 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 PHLDA1Q8WV24 401 aaPredicted RBP8.35□□□□□ -1.07
FAM3A-221ENST00000612856 KIR2DL4Q99706 377 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 MSRB1Q9NZV6 116 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 C9JAW5 83 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 C14orf178Q8N769 122 aaPredicted RBP8.35□□□□□ -1.07
FAM3A-221ENST00000612856 ZANQ9Y493 2812 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 GAGE12JA6NER3 117 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 K7EIM0 57 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 SIVA1O15304 175 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 GAGE7O76087 117 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 GAGE12FP0CL80 117 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 GAGE12GP0CL81 117 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 GAGE12IP0CL82 117 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 SRSF1Q07955 248 aaKnown RBP eCLIP8.35□□□□□ -1.07
FAM3A-221ENST00000612856 GAGE4Q13068 117 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 Q6ZUT4 128 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 TOMM7Q9P0U1 55 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 TNFRSF18Q9Y5U5 241 aa8.35□□□□□ -1.07
FAM3A-221ENST00000612856 SCGB3A1Q96QR1 104 aa8.34□□□□□ -1.07
FAM3A-221ENST00000612856 XGP55808 180 aa8.34□□□□□ -1.07
FAM3A-221ENST00000612856 A0A0U1RRA0 63 aa8.34□□□□□ -1.07
FAM3A-221ENST00000612856 TMEM170BQ5T4T1 132 aa8.34□□□□□ -1.07
FAM3A-221ENST00000612856 C18orf65Q6ZTR6 163 aa8.34□□□□□ -1.07
FAM3A-221ENST00000612856 SHANK2-AS3Q9BTD1 123 aa8.34□□□□□ -1.07
FAM3A-221ENST00000612856 TRAV26-2A0A0B4J265 109 aa8.33□□□□□ -1.08
FAM3A-221ENST00000612856 ELANEP08246 267 aa8.33□□□□□ -1.08
FAM3A-221ENST00000612856 GFRA4Q9GZZ7 299 aa8.33□□□□□ -1.08
FAM3A-221ENST00000612856 ATP5LO75964 103 aa8.33□□□□□ -1.08
FAM3A-221ENST00000612856 CTSGP08311 255 aa8.33□□□□□ -1.08
FAM3A-221ENST00000612856 ZFP2Q6ZN57 461 aa8.33□□□□□ -1.08
FAM3A-221ENST00000612856 ZNF492Q9P255 531 aa8.33□□□□□ -1.08
FAM3A-221ENST00000612856 TRAV21A0A0B4J279 112 aa8.33□□□□□ -1.08
FAM3A-221ENST00000612856 TRBV7-9A0A0J9YWB2 115 aa8.33□□□□□ -1.08
FAM3A-221ENST00000612856 SH2D1AO60880 128 aa8.33□□□□□ -1.08
FAM3A-221ENST00000612856 CT83Q5H943 113 aa8.33□□□□□ -1.08
FAM3A-221ENST00000612856 PPDPFLQ8WWR9 84 aa8.33□□□□□ -1.08
FAM3A-221ENST00000612856 IGHV3-64A0A075B6Q5 118 aa8.32□□□□□ -1.08
FAM3A-221ENST00000612856 BSNQ9UPA5 3926 aa8.32□□□□□ -1.08
FAM3A-221ENST00000612856 TNFRSF6BO95407 300 aa8.32□□□□□ -1.08
FAM3A-221ENST00000612856 PRR25Q96S07 402 aa8.32□□□□□ -1.08
FAM3A-221ENST00000612856 F5H768 121 aa8.32□□□□□ -1.08
FAM3A-221ENST00000612856 DUSP14O95147 198 aaKnown RBP8.32□□□□□ -1.08
FAM3A-221ENST00000612856 NIPBLQ6KC79 2804 aaeCLIP8.32□□□□□ -1.08
FAM3A-221ENST00000612856 ZNF876PQ49A33 203 aa8.31□□□□□ -1.08
FAM3A-221ENST00000612856 Q6AWC8 147 aa8.31□□□□□ -1.08
FAM3A-221ENST00000612856 Q6ZSV7 163 aa8.31□□□□□ -1.08
FAM3A-221ENST00000612856 C9orf139Q6ZV77 190 aa8.31□□□□□ -1.08
FAM3A-221ENST00000612856 MAPKAPK5-AS1Q8N8E1 139 aa8.31□□□□□ -1.08
FAM3A-221ENST00000612856 E9PLD3 99 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms