RNA–Protein interactions for RNA: ENST00000612779.1

HOXA2-202, Transcript of homeobox A2, humanhuman

Gene HOXA2, Length 1,993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2-202ENST00000612779 RNASE3P12724 160 aaKnown RBP13.94□□□□□ -0.18
HOXA2-202ENST00000612779 OR10AG1Q8NH19 301 aa13.94□□□□□ -0.18
HOXA2-202ENST00000612779 SCRT2Q9NQ03 307 aa13.94□□□□□ -0.18
HOXA2-202ENST00000612779 IGHV4-4A0A075B6R2 117 aa13.94□□□□□ -0.18
HOXA2-202ENST00000612779 ASIPP42127 132 aa13.94□□□□□ -0.18
HOXA2-202ENST00000612779 SPATA12Q7Z6I5 190 aa13.94□□□□□ -0.18
HOXA2-202ENST00000612779 STHQ8IWL8 128 aa13.94□□□□□ -0.18
HOXA2-202ENST00000612779 OR4C5Q8NGB2 326 aa13.94□□□□□ -0.18
HOXA2-202ENST00000612779 URB1-AS1Q96HZ7 61 aa13.94□□□□□ -0.18
HOXA2-202ENST00000612779 WFDC10AQ9H1F0 79 aa13.94□□□□□ -0.18
HOXA2-202ENST00000612779 TWIST1Q15672 202 aa13.93□□□□□ -0.18
HOXA2-202ENST00000612779 PPBPP02775 128 aa13.92□□□□□ -0.18
HOXA2-202ENST00000612779 CHCHD1Q96BP2 118 aaKnown RBP13.92□□□□□ -0.18
HOXA2-202ENST00000612779 IGHV1OR15-1A0A075B7D0 117 aa13.92□□□□□ -0.18
HOXA2-202ENST00000612779 LOC102724200A0A096LPH7 203 aaPredicted RBP13.92□□□□□ -0.18
HOXA2-202ENST00000612779 C12orf54Q6X4T0 127 aa13.91□□□□□ -0.18
HOXA2-202ENST00000612779 MCRIP2Q9BUT9 160 aaKnown RBP13.91□□□□□ -0.18
HOXA2-202ENST00000612779 MUC4Q99102 2169 aa13.91□□□□□ -0.18
HOXA2-202ENST00000612779 S100A4P26447 101 aaKnown RBP13.91□□□□□ -0.18
HOXA2-202ENST00000612779 CACNG7P62955 275 aa13.91□□□□□ -0.18
HOXA2-202ENST00000612779 C3orf56Q8N813 242 aa13.91□□□□□ -0.18
HOXA2-202ENST00000612779 TMEM191AQ9H0A3 160 aa13.91□□□□□ -0.18
HOXA2-202ENST00000612779 IGHV3-16A0A0C4DH30 117 aa13.9□□□□□ -0.18
HOXA2-202ENST00000612779 WIPF1O43516 503 aa13.9□□□□□ -0.18
HOXA2-202ENST00000612779 FAM104BQ5XKR9 115 aa13.9□□□□□ -0.18
HOXA2-202ENST00000612779 SHISA2Q6UWI4 295 aa13.9□□□□□ -0.18
HOXA2-202ENST00000612779 Q8N1Y9 231 aa13.9□□□□□ -0.18
HOXA2-202ENST00000612779 SYS1-DBNDD2H3BUS1 97 aa13.89□□□□□ -0.19
HOXA2-202ENST00000612779 TAX1BP3O14907 124 aa13.89□□□□□ -0.19
HOXA2-202ENST00000612779 SPRY2O43597 315 aa13.89□□□□□ -0.19
HOXA2-202ENST00000612779 TIMM8BQ9Y5J9 83 aaPredicted RBP13.89□□□□□ -0.19
HOXA2-202ENST00000612779 NXPH4O95158 308 aa13.88□□□□□ -0.19
HOXA2-202ENST00000612779 VAMP3Q15836 100 aa13.88□□□□□ -0.19
HOXA2-202ENST00000612779 MPV17L2Q567V2 206 aa13.88□□□□□ -0.19
HOXA2-202ENST00000612779 BVES-AS1Q5T3Y7 98 aa13.88□□□□□ -0.19
HOXA2-202ENST00000612779 SPANXN1Q5VSR9 72 aa13.88□□□□□ -0.19
HOXA2-202ENST00000612779 SLC25A34Q6PIV7 304 aa13.88□□□□□ -0.19
HOXA2-202ENST00000612779 AMN1Q8IY45 258 aa13.88□□□□□ -0.19
HOXA2-202ENST00000612779 DEFB125Q8N687 156 aa13.88□□□□□ -0.19
HOXA2-202ENST00000612779 C9orf85Q96MD7 179 aa13.88□□□□□ -0.19
HOXA2-202ENST00000612779 IGHV1-24A0A0C4DH33 117 aa13.87□□□□□ -0.19
HOXA2-202ENST00000612779 INSP01308 110 aa13.87□□□□□ -0.19
HOXA2-202ENST00000612779 GIG44P09565 113 aaPredicted RBP13.87□□□□□ -0.19
HOXA2-202ENST00000612779 LINC00467Q9BRT7 94 aa13.87□□□□□ -0.19
HOXA2-202ENST00000612779 MDFICQ9P1T7 246 aa13.87□□□□□ -0.19
HOXA2-202ENST00000612779 XCL2Q9UBD3 114 aa13.87□□□□□ -0.19
HOXA2-202ENST00000612779 STAB1Q9NY15 2570 aa13.87□□□□□ -0.19
HOXA2-202ENST00000612779 NOTCH3Q9UM47 2321 aa13.87□□□□□ -0.19
HOXA2-202ENST00000612779 RNF185Q96GF1 192 aa13.87□□□□□ -0.19
HOXA2-202ENST00000612779 PHLDA3Q9Y5J5 127 aa13.87□□□□□ -0.19
HOXA2-202ENST00000612779 PET117Q6UWS5 81 aa13.86□□□□□ -0.19
HOXA2-202ENST00000612779 LEPROTL1O95214 131 aa13.85□□□□□ -0.19
HOXA2-202ENST00000612779 EVI2AP22794 236 aa13.85□□□□□ -0.19
HOXA2-202ENST00000612779 MRPL51Q4U2R6 128 aaKnown RBP13.85□□□□□ -0.19
HOXA2-202ENST00000612779 M0R381 172 aa13.85□□□□□ -0.19
HOXA2-202ENST00000612779 C1orf158Q8N1D5 194 aa13.85□□□□□ -0.19
HOXA2-202ENST00000612779 U3KQK5 164 aa13.85□□□□□ -0.19
HOXA2-202ENST00000612779 TRGV11A0A075B6L2 103 aa13.84□□□□□ -0.19
HOXA2-202ENST00000612779 HSBP1L1C9JCN9 74 aa13.84□□□□□ -0.19
HOXA2-202ENST00000612779 NUDT3O95989 172 aa13.84□□□□□ -0.19
HOXA2-202ENST00000612779 GTSCR1Q86UQ5 136 aa13.84□□□□□ -0.19
HOXA2-202ENST00000612779 TRRAPQ9Y4A5 3859 aa13.84□□□□□ -0.19
HOXA2-202ENST00000612779 hDV102S1A0JD36 115 aa13.83□□□□□ -0.19
HOXA2-202ENST00000612779 CBY3A6NI87 242 aa13.83□□□□□ -0.19
HOXA2-202ENST00000612779 PRM2P04554 102 aa13.83□□□□□ -0.19
HOXA2-202ENST00000612779 CST9LQ9H4G1 147 aa13.83□□□□□ -0.19
HOXA2-202ENST00000612779 RPL35AP18077 110 aaKnown RBP13.83□□□□□ -0.2
HOXA2-202ENST00000612779 LINC00173Q6ZV60 143 aa13.83□□□□□ -0.2
HOXA2-202ENST00000612779 LINC01587Q99440 93 aa13.82□□□□□ -0.2
HOXA2-202ENST00000612779 D6R8Y8 96 aa13.82□□□□□ -0.2
HOXA2-202ENST00000612779 OCIAD2Q56VL3 154 aa13.82□□□□□ -0.2
HOXA2-202ENST00000612779 MORN3Q6PF18 240 aaPredicted RBP13.82□□□□□ -0.2
HOXA2-202ENST00000612779 MAP1LC3CQ9BXW4 147 aa13.82□□□□□ -0.2
HOXA2-202ENST00000612779 TP73-AS1Q9UF72 201 aa13.82□□□□□ -0.2
HOXA2-202ENST00000612779 RNF151Q2KHN1 245 aa13.81□□□□□ -0.2
HOXA2-202ENST00000612779 SMIM15Q7Z3B0 74 aa13.81□□□□□ -0.2
HOXA2-202ENST00000612779 PMCHL2Q9BQD1 86 aa13.81□□□□□ -0.2
HOXA2-202ENST00000612779 HTN1P15515 57 aa13.8□□□□□ -0.2
HOXA2-202ENST00000612779 CSNK1G2-AS1Q8NCQ2 148 aa13.8□□□□□ -0.2
HOXA2-202ENST00000612779 HSPB8Q9UJY1 196 aa13.8□□□□□ -0.2
HOXA2-202ENST00000612779 LINC01545Q5VT33 79 aa13.8□□□□□ -0.2
HOXA2-202ENST00000612779 ORMDL3Q8N138 153 aa13.8□□□□□ -0.2
HOXA2-202ENST00000612779 C11orf72Q8NBR9 251 aa13.8□□□□□ -0.2
HOXA2-202ENST00000612779 KIF25-AS1Q9Y6Z4 181 aa13.8□□□□□ -0.2
HOXA2-202ENST00000612779 GAS8-AS1O95177 125 aa13.79□□□□□ -0.2
HOXA2-202ENST00000612779 SMKR1H3BMG3 65 aa13.78□□□□□ -0.2
HOXA2-202ENST00000612779 C14orf178Q8N769 122 aaPredicted RBP13.78□□□□□ -0.2
HOXA2-202ENST00000612779 PRELID3AQ96N28 172 aa13.78□□□□□ -0.2
HOXA2-202ENST00000612779 AP1S3Q96PC3 154 aa13.78□□□□□ -0.2
HOXA2-202ENST00000612779 CKS2P33552 79 aa13.78□□□□□ -0.2
HOXA2-202ENST00000612779 AMMECR1LQ6DCA0 310 aa13.78□□□□□ -0.2
HOXA2-202ENST00000612779 C1QTNF4Q9BXJ3 329 aa13.78□□□□□ -0.2
HOXA2-202ENST00000612779 DPH3P1Q9H4G8 78 aa13.78□□□□□ -0.2
HOXA2-202ENST00000612779 JPT2Q9H910 190 aa13.78□□□□□ -0.2
HOXA2-202ENST00000612779 NCR2O95944 276 aa13.77□□□□□ -0.21
HOXA2-202ENST00000612779 AZU1P20160 251 aa13.77□□□□□ -0.21
HOXA2-202ENST00000612779 LINC00315P59091 139 aa13.77□□□□□ -0.21
HOXA2-202ENST00000612779 NPYP01303 97 aa13.76□□□□□ -0.21
HOXA2-202ENST00000612779 COX8AP10176 69 aa13.76□□□□□ -0.21
HOXA2-202ENST00000612779 ZNF415Q09FC8 603 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms