RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 HIST2H2BEQ16778 126 aa15.32■□□□□ 0.04
CBWD3-207ENST00000611426 TDRG1Q3Y452 100 aa15.32■□□□□ 0.04
CBWD3-207ENST00000611426 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.32■□□□□ 0.04
CBWD3-207ENST00000611426 HIST1H2BHQ93079 126 aa15.32■□□□□ 0.04
CBWD3-207ENST00000611426 HIST1H2BNQ99877 126 aa15.32■□□□□ 0.04
CBWD3-207ENST00000611426 HIST1H2BMQ99879 126 aa15.32■□□□□ 0.04
CBWD3-207ENST00000611426 SSBP4Q9BWG4 385 aaPredicted RBP15.32■□□□□ 0.04
CBWD3-207ENST00000611426 KRTAP17-1Q9BYP8 105 aa15.32■□□□□ 0.04
CBWD3-207ENST00000611426 ZNF324O75467 553 aaPredicted RBP15.31■□□□□ 0.04
CBWD3-207ENST00000611426 OR5AL1P0C617 328 aa15.31■□□□□ 0.04
CBWD3-207ENST00000611426 HTN1P15515 57 aa15.31■□□□□ 0.04
CBWD3-207ENST00000611426 RNASE4P34096 147 aaKnown RBP15.31■□□□□ 0.04
CBWD3-207ENST00000611426 FABP9Q0Z7S8 132 aa15.31■□□□□ 0.04
CBWD3-207ENST00000611426 C15orf53Q8NAA6 179 aa15.31■□□□□ 0.04
CBWD3-207ENST00000611426 PKD1P98161 4303 aa15.3■□□□□ 0.04
CBWD3-207ENST00000611426 SNAI2O43623 268 aa15.3■□□□□ 0.04
CBWD3-207ENST00000611426 SPINK4O60575 86 aa15.3■□□□□ 0.04
CBWD3-207ENST00000611426 TRGC1P0CF51 173 aa15.3■□□□□ 0.04
CBWD3-207ENST00000611426 KIR3DS1Q14943 382 aa15.3■□□□□ 0.04
CBWD3-207ENST00000611426 GFI1BQ5VTD9 330 aa15.3■□□□□ 0.04
CBWD3-207ENST00000611426 LYZL1Q6UWQ5 148 aa15.3■□□□□ 0.04
CBWD3-207ENST00000611426 ZFP82Q8N141 532 aa15.3■□□□□ 0.04
CBWD3-207ENST00000611426 BORCS7Q96B45 105 aa15.3■□□□□ 0.04
CBWD3-207ENST00000611426 MRPL18Q9H0U6 180 aaKnown RBP15.3■□□□□ 0.04
CBWD3-207ENST00000611426 TMSB15BA0A087X1C1 80 aa15.29■□□□□ 0.04
CBWD3-207ENST00000611426 PLAC8L1A1L4L8 177 aa15.29■□□□□ 0.04
CBWD3-207ENST00000611426 F5H768 121 aa15.29■□□□□ 0.04
CBWD3-207ENST00000611426 ARMS2P0C7Q2 107 aa15.29■□□□□ 0.04
CBWD3-207ENST00000611426 Q6ZR54 194 aa15.29■□□□□ 0.04
CBWD3-207ENST00000611426 COA6Q5JTJ3 125 aaKnown RBP15.28■□□□□ 0.04
CBWD3-207ENST00000611426 Q6ZQT7 251 aa15.28■□□□□ 0.04
CBWD3-207ENST00000611426 ZNF493Q6ZR52 646 aa15.28■□□□□ 0.04
CBWD3-207ENST00000611426 KCNS1Q96KK3 526 aa15.28■□□□□ 0.04
CBWD3-207ENST00000611426 C16orf74Q96GX8 76 aa15.27■□□□□ 0.04
CBWD3-207ENST00000611426 C20orf144Q9BQM9 153 aa15.27■□□□□ 0.04
CBWD3-207ENST00000611426 NACAE9PAV3 2078 aa15.27■□□□□ 0.04
CBWD3-207ENST00000611426 CBY3A6NI87 242 aa15.26■□□□□ 0.03
CBWD3-207ENST00000611426 ATP5G1P05496 136 aa15.26■□□□□ 0.03
CBWD3-207ENST00000611426 ANXA2RQ3ZCQ2 193 aa15.26■□□□□ 0.03
CBWD3-207ENST00000611426 SCRT2Q9NQ03 307 aa15.26■□□□□ 0.03
CBWD3-207ENST00000611426 TIMM8BQ9Y5J9 83 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-207ENST00000611426 LOC105371267A0A1B0GV96 52 aa15.25■□□□□ 0.03
CBWD3-207ENST00000611426 C5orf52A6NGY3 159 aa15.25■□□□□ 0.03
CBWD3-207ENST00000611426 J3KRW8 73 aa15.25■□□□□ 0.03
CBWD3-207ENST00000611426 GRIFINA4D1Z8 144 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 NUDT3O95989 172 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 APCSP02743 223 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 CAMPP49913 170 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 RAB4BP61018 213 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 CACNG7P62955 275 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 LINC00467Q9BRT7 94 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 TRAV12-3A0A0B4J271 114 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 S100A6P06703 90 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 ASIPP42127 132 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 SLAQ13239 276 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 DMRTA1Q5VZB9 504 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 FAM159AQ6UWV7 190 aa15.24■□□□□ 0.03
CBWD3-207ENST00000611426 TMEM263Q8WUH6 116 aaKnown RBP15.24■□□□□ 0.03
CBWD3-207ENST00000611426 NOP10Q9NPE3 64 aaKnown RBP15.24■□□□□ 0.03
CBWD3-207ENST00000611426 C1orf134Q5TEV5 83 aa15.23■□□□□ 0.03
CBWD3-207ENST00000611426 RNASE8Q8TDE3 154 aaKnown RBP15.23■□□□□ 0.03
CBWD3-207ENST00000611426 TPPP3Q9BW30 176 aa15.23■□□□□ 0.03
CBWD3-207ENST00000611426 PCLOQ9Y6V0 5065 aa15.22■□□□□ 0.03
CBWD3-207ENST00000611426 DNAH11Q96DT5 4516 aa15.22■□□□□ 0.03
CBWD3-207ENST00000611426 NXPH4O95158 308 aa15.22■□□□□ 0.03
CBWD3-207ENST00000611426 NAGKQ9UJ70 344 aa15.22■□□□□ 0.03
CBWD3-207ENST00000611426 IGHV1OR15-1A0A075B7D0 117 aa15.21■□□□□ 0.02
CBWD3-207ENST00000611426 TMEM191AQ9H0A3 160 aa15.21■□□□□ 0.02
CBWD3-207ENST00000611426 DYNC1H1Q14204 4646 aaKnown RBP15.21■□□□□ 0.02
CBWD3-207ENST00000611426 RNASE3P12724 160 aaKnown RBP15.2■□□□□ 0.02
CBWD3-207ENST00000611426 HOXA5P20719 270 aa15.2■□□□□ 0.02
CBWD3-207ENST00000611426 NTF3P20783 257 aa15.2■□□□□ 0.02
CBWD3-207ENST00000611426 Q0VG73 95 aa15.2■□□□□ 0.02
CBWD3-207ENST00000611426 MUC21Q5SSG8 566 aa15.2■□□□□ 0.02
CBWD3-207ENST00000611426 H3BVH4 76 aa15.19■□□□□ 0.02
CBWD3-207ENST00000611426 CCL18P55774 89 aa15.19■□□□□ 0.02
CBWD3-207ENST00000611426 OR10AG1Q8NH19 301 aa15.19■□□□□ 0.02
CBWD3-207ENST00000611426 C9orf85Q96MD7 179 aa15.19■□□□□ 0.02
CBWD3-207ENST00000611426 TP53TG3Q9ULZ0 132 aa15.19■□□□□ 0.02
CBWD3-207ENST00000611426 NDUFA6P56556 154 aa15.18■□□□□ 0.02
CBWD3-207ENST00000611426 SNRPEP62304 92 aaKnown RBP15.18■□□□□ 0.02
CBWD3-207ENST00000611426 OR10J3Q5JRS4 329 aa15.18■□□□□ 0.02
CBWD3-207ENST00000611426 FAM104BQ5XKR9 115 aa15.18■□□□□ 0.02
CBWD3-207ENST00000611426 TRGV11A0A075B6L2 103 aa15.17■□□□□ 0.02
CBWD3-207ENST00000611426 IGHV3-16A0A0C4DH30 117 aa15.17■□□□□ 0.02
CBWD3-207ENST00000611426 GNRH2O43555 120 aa15.17■□□□□ 0.02
CBWD3-207ENST00000611426 S100A4P26447 101 aaKnown RBP15.17■□□□□ 0.02
CBWD3-207ENST00000611426 TWIST1Q15672 202 aa15.17■□□□□ 0.02
CBWD3-207ENST00000611426 ZNRF2Q8NHG8 242 aa15.17■□□□□ 0.02
CBWD3-207ENST00000611426 ALKBH7Q9BT30 221 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-207ENST00000611426 NBDYA0A0U1RRE5 68 aa15.15■□□□□ 0.02
CBWD3-207ENST00000611426 SRIP30626 198 aa15.15■□□□□ 0.02
CBWD3-207ENST00000611426 LINC00588Q9Y4M8 146 aa15.15■□□□□ 0.02
CBWD3-207ENST00000611426 GAGE12BA1L429 117 aa15.14■□□□□ 0.01
CBWD3-207ENST00000611426 GAGE7O76087 117 aa15.14■□□□□ 0.01
CBWD3-207ENST00000611426 GAGE12FP0CL80 117 aa15.14■□□□□ 0.01
CBWD3-207ENST00000611426 GAGE12GP0CL81 117 aa15.14■□□□□ 0.01
CBWD3-207ENST00000611426 GAGE12IP0CL82 117 aa15.14■□□□□ 0.01
CBWD3-207ENST00000611426 ESDP10768 282 aa15.14■□□□□ 0.01
CBWD3-207ENST00000611426 KIAA1644Q3SXP7 199 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms