RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 DMRTA1Q5VZB9 504 aa13.08□□□□□ -0.32
SGMS1-208ENST00000608287 JPT2Q9H910 190 aa13.08□□□□□ -0.32
SGMS1-208ENST00000608287 LINC00315P59091 139 aa13.07□□□□□ -0.32
SGMS1-208ENST00000608287 ALKAL2Q6UX46 152 aa13.07□□□□□ -0.32
SGMS1-208ENST00000608287 ZFP2Q6ZN57 461 aa13.07□□□□□ -0.32
SGMS1-208ENST00000608287 SH2D6Q7Z4S9 175 aa13.07□□□□□ -0.32
SGMS1-208ENST00000608287 M0R381 172 aa13.06□□□□□ -0.32
SGMS1-208ENST00000608287 PDE6DO43924 150 aa13.06□□□□□ -0.32
SGMS1-208ENST00000608287 BCL2P10415 239 aa13.06□□□□□ -0.32
SGMS1-208ENST00000608287 NKX2-5P52952 324 aaPredicted RBP13.06□□□□□ -0.32
SGMS1-208ENST00000608287 RPL19P84098 196 aaKnown RBP13.06□□□□□ -0.32
SGMS1-208ENST00000608287 CENPWQ5EE01 88 aa13.06□□□□□ -0.32
SGMS1-208ENST00000608287 VPS13BQ7Z7G8 4022 aa13.05□□□□□ -0.32
SGMS1-208ENST00000608287 SAMD10Q9BYL1 202 aa13.05□□□□□ -0.32
SGMS1-208ENST00000608287 MED9Q9NWA0 146 aa13.05□□□□□ -0.32
SGMS1-208ENST00000608287 VAX2Q9UIW0 290 aa13.05□□□□□ -0.32
SGMS1-208ENST00000608287 FAT1Q14517 4588 aa13.04□□□□□ -0.32
SGMS1-208ENST00000608287 RAB19A4D1S5 217 aa13.04□□□□□ -0.32
SGMS1-208ENST00000608287 FAM74A4Q5TZK3 123 aa13.04□□□□□ -0.32
SGMS1-208ENST00000608287 NFE4Q86UQ8 179 aa13.04□□□□□ -0.32
SGMS1-208ENST00000608287 WFDC10BQ8IUB3 73 aa13.04□□□□□ -0.32
SGMS1-208ENST00000608287 ZFP82Q8N141 532 aa13.04□□□□□ -0.32
SGMS1-208ENST00000608287 UBR4Q5T4S7 5183 aa13.04□□□□□ -0.32
SGMS1-208ENST00000608287 CXCL1P09341 107 aa13.03□□□□□ -0.32
SGMS1-208ENST00000608287 TAGLN2P37802 199 aaKnown RBP13.03□□□□□ -0.32
SGMS1-208ENST00000608287 GNG4P50150 75 aa13.03□□□□□ -0.32
SGMS1-208ENST00000608287 BLOC1S1P78537 153 aa13.03□□□□□ -0.32
SGMS1-208ENST00000608287 LY96Q9Y6Y9 160 aa13.03□□□□□ -0.32
SGMS1-208ENST00000608287 RHODO00212 210 aa13.02□□□□□ -0.33
SGMS1-208ENST00000608287 SMR3BP02814 79 aaPredicted RBP13.02□□□□□ -0.33
SGMS1-208ENST00000608287 UFSP1Q6NVU6 142 aa13.02□□□□□ -0.33
SGMS1-208ENST00000608287 Q6ZRN7 208 aaPredicted RBP13.02□□□□□ -0.33
SGMS1-208ENST00000608287 SFRP2Q96HF1 295 aa13.02□□□□□ -0.33
SGMS1-208ENST00000608287 BOLA1Q9Y3E2 137 aa13.02□□□□□ -0.33
SGMS1-208ENST00000608287 TRAV9-2A0A087WT02 112 aa13.01□□□□□ -0.33
SGMS1-208ENST00000608287 A0A087WWL8 130 aa13.01□□□□□ -0.33
SGMS1-208ENST00000608287 IGLV2-8P01709 118 aa13.01□□□□□ -0.33
SGMS1-208ENST00000608287 TIRAPP58753 221 aa13.01□□□□□ -0.33
SGMS1-208ENST00000608287 DAZAP1Q96EP5 407 aaKnown RBP13.01□□□□□ -0.33
SGMS1-208ENST00000608287 GAGE12JA6NER3 117 aa13□□□□□ -0.33
SGMS1-208ENST00000608287 GAGE1Q13065 139 aa13□□□□□ -0.33
SGMS1-208ENST00000608287 GAGE4Q13068 117 aa13□□□□□ -0.33
SGMS1-208ENST00000608287 GAGE5Q13069 117 aa13□□□□□ -0.33
SGMS1-208ENST00000608287 GAGE13Q4V321 117 aa13□□□□□ -0.33
SGMS1-208ENST00000608287 C14orf178Q8N769 122 aaPredicted RBP13□□□□□ -0.33
SGMS1-208ENST00000608287 OR10AG1Q8NH19 301 aa13□□□□□ -0.33
SGMS1-208ENST00000608287 ATP6V0E2Q8NHE4 81 aa13□□□□□ -0.33
SGMS1-208ENST00000608287 SMIM12Q96EX1 92 aa13□□□□□ -0.33
SGMS1-208ENST00000608287 KRTAP29-1A8MX34 341 aaPredicted RBP12.99□□□□□ -0.33
SGMS1-208ENST00000608287 EVI2AP22794 236 aa12.99□□□□□ -0.33
SGMS1-208ENST00000608287 GCSHP23434 173 aa12.99□□□□□ -0.33
SGMS1-208ENST00000608287 KRTAP10-1P60331 282 aa12.99□□□□□ -0.33
SGMS1-208ENST00000608287 TRBV20OR9-2A0A075B6H5 130 aa12.98□□□□□ -0.33
SGMS1-208ENST00000608287 TRAV8-6A0A0B4J262 113 aa12.98□□□□□ -0.33
SGMS1-208ENST00000608287 MUC21A0A0G2JKD1 596 aa12.98□□□□□ -0.33
SGMS1-208ENST00000608287 MUC21A0A140T8X8 626 aa12.98□□□□□ -0.33
SGMS1-208ENST00000608287 SNAI2O43623 268 aa12.98□□□□□ -0.33
SGMS1-208ENST00000608287 CRYGDP07320 174 aa12.98□□□□□ -0.33
SGMS1-208ENST00000608287 DNAH10OSP0CZ25 163 aa12.98□□□□□ -0.33
SGMS1-208ENST00000608287 OR10J3Q5JRS4 329 aa12.98□□□□□ -0.33
SGMS1-208ENST00000608287 SPANXN1Q5VSR9 72 aa12.98□□□□□ -0.33
SGMS1-208ENST00000608287 GTSF1LQ9H1H1 148 aa12.98□□□□□ -0.33
SGMS1-208ENST00000608287 OR5AL1P0C617 328 aa12.97□□□□□ -0.33
SGMS1-208ENST00000608287 SSTP61278 116 aa12.97□□□□□ -0.33
SGMS1-208ENST00000608287 OR2D3Q8NGH3 330 aa12.97□□□□□ -0.33
SGMS1-208ENST00000608287 TMEM70Q9BUB7 260 aa12.97□□□□□ -0.33
SGMS1-208ENST00000608287 SSBP4Q9BWG4 385 aaPredicted RBP12.97□□□□□ -0.33
SGMS1-208ENST00000608287 Q9UF83 564 aa12.97□□□□□ -0.33
SGMS1-208ENST00000608287 IGHV3-38A0A0C4DH36 116 aa12.96□□□□□ -0.33
SGMS1-208ENST00000608287 C19orf71A6NCJ1 209 aa12.96□□□□□ -0.33
SGMS1-208ENST00000608287 RBFOX3A6NFN3 312 aa12.96□□□□□ -0.33
SGMS1-208ENST00000608287 PLA2G1BP04054 148 aaKnown RBP12.96□□□□□ -0.33
SGMS1-208ENST00000608287 GZMBP10144 247 aa12.96□□□□□ -0.33
SGMS1-208ENST00000608287 LELP1Q5T871 98 aa12.96□□□□□ -0.33
SGMS1-208ENST00000608287 BIN3Q9NQY0 253 aa12.96□□□□□ -0.33
SGMS1-208ENST00000608287 TNFRSF18Q9Y5U5 241 aa12.96□□□□□ -0.33
SGMS1-208ENST00000608287 K7EP13 123 aa12.95□□□□□ -0.34
SGMS1-208ENST00000608287 P01737 135 aa12.95□□□□□ -0.34
SGMS1-208ENST00000608287 RPS20P60866 119 aaKnown RBP12.95□□□□□ -0.34
SGMS1-208ENST00000608287 LYPD6BQ8NI32 183 aa12.95□□□□□ -0.34
SGMS1-208ENST00000608287 TPPP3Q9BW30 176 aa12.95□□□□□ -0.34
SGMS1-208ENST00000608287 A0A087WTM6 91 aa12.94□□□□□ -0.34
SGMS1-208ENST00000608287 LINC00694P0DN24 101 aa12.94□□□□□ -0.34
SGMS1-208ENST00000608287 XKRY2A2RUG3 117 aa12.93□□□□□ -0.34
SGMS1-208ENST00000608287 FUSP35637 526 aaKnown RBP eCLIP12.93□□□□□ -0.342e-7■■□□□ 14.1
SGMS1-208ENST00000608287 ZNF56Q15929 161 aa12.93□□□□□ -0.34
SGMS1-208ENST00000608287 C10orf126Q8N4M7 172 aa12.93□□□□□ -0.34
SGMS1-208ENST00000608287 FER1L6-AS1Q8NA97 138 aa12.93□□□□□ -0.34
SGMS1-208ENST00000608287 MSRB1Q9NZV6 116 aa12.93□□□□□ -0.34
SGMS1-208ENST00000608287 TMEM250H0YL14 139 aa12.92□□□□□ -0.34
SGMS1-208ENST00000608287 LINC01556Q5JQF7 62 aa12.92□□□□□ -0.34
SGMS1-208ENST00000608287 TOR2AQ5JU69 321 aa12.92□□□□□ -0.34
SGMS1-208ENST00000608287 DEFB104AQ8WTQ1 72 aa12.92□□□□□ -0.34
SGMS1-208ENST00000608287 TRBV10-1A0A0K0K1A3 114 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 IGHV3-30P01768 117 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 IGHV3-33P01772 117 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 IGLC6P0CF74 106 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 SMIM17P0DL12 118 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 IGHV3-30-3P0DP02 117 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 IGHV3-30-5P0DP03 117 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms