RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 S100A9P06702 114 aaKnown RBP9.87□□□□□ -0.83
SSBP4-214ENST00000607020 GATA1P15976 413 aaPredicted RBP9.87□□□□□ -0.83
SSBP4-214ENST00000607020 MEF2BQ02080 365 aaPredicted RBP9.87□□□□□ -0.83
SSBP4-214ENST00000607020 COX8CQ7Z4L0 72 aa9.87□□□□□ -0.83
SSBP4-214ENST00000607020 LYPD6BQ8NI32 183 aa9.87□□□□□ -0.83
SSBP4-214ENST00000607020 C11orf52Q96A22 123 aa9.87□□□□□ -0.83
SSBP4-214ENST00000607020 CHAC1Q9BUX1 264 aa9.87□□□□□ -0.83
SSBP4-214ENST00000607020 PDE6DO43924 150 aa9.86□□□□□ -0.83
SSBP4-214ENST00000607020 TAGLN2P37802 199 aaKnown RBP9.86□□□□□ -0.83
SSBP4-214ENST00000607020 LELP1Q5T871 98 aa9.86□□□□□ -0.83
SSBP4-214ENST00000607020 TMEM183AQ8IXX5 376 aa9.86□□□□□ -0.83
SSBP4-214ENST00000607020 NHLRC2Q8NBF2 726 aa9.86□□□□□ -0.83
SSBP4-214ENST00000607020 KCNS1Q96KK3 526 aa9.86□□□□□ -0.83
SSBP4-214ENST00000607020 C11orf21Q9P2W6 132 aa9.86□□□□□ -0.83
SSBP4-214ENST00000607020 VAX2Q9UIW0 290 aa9.86□□□□□ -0.83
SSBP4-214ENST00000607020 M0R2P5 195 aa9.85□□□□□ -0.83
SSBP4-214ENST00000607020 OR10J3Q5JRS4 329 aa9.85□□□□□ -0.83
SSBP4-214ENST00000607020 TEX261Q6UWH6 196 aa9.85□□□□□ -0.83
SSBP4-214ENST00000607020 ZC2HC1AQ96GY0 325 aa9.85□□□□□ -0.83
SSBP4-214ENST00000607020 SDF2L1Q9HCN8 221 aa9.85□□□□□ -0.83
SSBP4-214ENST00000607020 TRAV8-3A0A0A6YYJ7 113 aa9.84□□□□□ -0.83
SSBP4-214ENST00000607020 CIDEAO60543 219 aa9.84□□□□□ -0.83
SSBP4-214ENST00000607020 IGHV3-30P01768 117 aa9.84□□□□□ -0.83
SSBP4-214ENST00000607020 IGHV3-33P01772 117 aa9.84□□□□□ -0.83
SSBP4-214ENST00000607020 IGHV3-30-3P0DP02 117 aa9.84□□□□□ -0.83
SSBP4-214ENST00000607020 IGHV3-30-5P0DP03 117 aa9.84□□□□□ -0.83
SSBP4-214ENST00000607020 RPL35P42766 123 aaKnown RBP9.84□□□□□ -0.83
SSBP4-214ENST00000607020 CIRBP-AS1Q8TBR5 109 aa9.84□□□□□ -0.83
SSBP4-214ENST00000607020 DERL1Q9BUN8 251 aa9.84□□□□□ -0.83
SSBP4-214ENST00000607020 IGHV3-16A0A0C4DH30 117 aa9.83□□□□□ -0.84
SSBP4-214ENST00000607020 FABP5P3A8MUU1 101 aa9.83□□□□□ -0.84
SSBP4-214ENST00000607020 GNRH2O43555 120 aa9.83□□□□□ -0.84
SSBP4-214ENST00000607020 IGLV2-8P01709 118 aa9.83□□□□□ -0.84
SSBP4-214ENST00000607020 TYMSP04818 313 aa9.83□□□□□ -0.84
SSBP4-214ENST00000607020 CRIP1P50238 77 aa9.83□□□□□ -0.84
SSBP4-214ENST00000607020 FAM162BQ5T6X4 162 aa9.83□□□□□ -0.84
SSBP4-214ENST00000607020 BAGE2Q86Y30 109 aa9.83□□□□□ -0.84
SSBP4-214ENST00000607020 MLST8Q9BVC4 326 aa9.83□□□□□ -0.84
SSBP4-214ENST00000607020 COX11Q9Y6N1 276 aa9.83□□□□□ -0.84
SSBP4-214ENST00000607020 TRBV6-4A0A1B0GX49 114 aa9.82□□□□□ -0.84
SSBP4-214ENST00000607020 RBFOX3A6NFN3 312 aa9.82□□□□□ -0.84
SSBP4-214ENST00000607020 SH2D1AO60880 128 aa9.82□□□□□ -0.84
SSBP4-214ENST00000607020 ZNF674Q2M3X9 581 aa9.82□□□□□ -0.84
SSBP4-214ENST00000607020 SLC25A29Q8N8R3 303 aa9.82□□□□□ -0.84
SSBP4-214ENST00000607020 PRADC1Q9BSG0 188 aa9.82□□□□□ -0.84
SSBP4-214ENST00000607020 GTSF1LQ9H1H1 148 aa9.82□□□□□ -0.84
SSBP4-214ENST00000607020 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.81□□□□□ -0.84
SSBP4-214ENST00000607020 IGKV3D-20A0A0C4DH25 116 aa9.81□□□□□ -0.84
SSBP4-214ENST00000607020 RS1O15537 224 aa9.81□□□□□ -0.84
SSBP4-214ENST00000607020 TOR2AQ5JU69 321 aa9.81□□□□□ -0.84
SSBP4-214ENST00000607020 ZNF506Q5JVG8 444 aa9.81□□□□□ -0.84
SSBP4-214ENST00000607020 Q8N976 141 aa9.81□□□□□ -0.84
SSBP4-214ENST00000607020 MED9Q9NWA0 146 aa9.81□□□□□ -0.84
SSBP4-214ENST00000607020 LECT2O14960 151 aa9.8□□□□□ -0.84
SSBP4-214ENST00000607020 RHOHQ15669 191 aa9.8□□□□□ -0.84
SSBP4-214ENST00000607020 LINC01620Q4KN68 170 aa9.8□□□□□ -0.84
SSBP4-214ENST00000607020 CENPWQ5EE01 88 aa9.8□□□□□ -0.84
SSBP4-214ENST00000607020 RNF213Q63HN8 5207 aa9.79□□□□□ -0.84
SSBP4-214ENST00000607020 B4DEV8 164 aa9.79□□□□□ -0.84
SSBP4-214ENST00000607020 TMEM250H0YL14 139 aa9.79□□□□□ -0.84
SSBP4-214ENST00000607020 M0R036 132 aa9.79□□□□□ -0.84
SSBP4-214ENST00000607020 GNG4P50150 75 aa9.79□□□□□ -0.84
SSBP4-214ENST00000607020 LINC01559Q495D7 138 aa9.79□□□□□ -0.84
SSBP4-214ENST00000607020 ATP6V0E2Q8NHE4 81 aa9.79□□□□□ -0.84
SSBP4-214ENST00000607020 BAALCQ8WXS3 180 aa9.79□□□□□ -0.84
SSBP4-214ENST00000607020 FAM210AQ96ND0 272 aa9.79□□□□□ -0.84
SSBP4-214ENST00000607020 TRBV20OR9-2A0A075B6H5 130 aa9.78□□□□□ -0.84
SSBP4-214ENST00000607020 RAB19A4D1S5 217 aa9.78□□□□□ -0.84
SSBP4-214ENST00000607020 KRBOX1C9JBD0 128 aa9.78□□□□□ -0.84
SSBP4-214ENST00000607020 RNASE3P12724 160 aaKnown RBP9.78□□□□□ -0.84
SSBP4-214ENST00000607020 ASIPP42127 132 aa9.78□□□□□ -0.84
SSBP4-214ENST00000607020 PRR27Q6MZM9 219 aa9.78□□□□□ -0.84
SSBP4-214ENST00000607020 SMIM12Q96EX1 92 aa9.78□□□□□ -0.84
SSBP4-214ENST00000607020 C9orf85Q96MD7 179 aa9.78□□□□□ -0.84
SSBP4-214ENST00000607020 EIF5A2Q9GZV4 153 aaKnown RBP9.78□□□□□ -0.84
SSBP4-214ENST00000607020 MT1HL1P0DM35 61 aa9.77□□□□□ -0.85
SSBP4-214ENST00000607020 S100A4P26447 101 aaKnown RBP9.77□□□□□ -0.85
SSBP4-214ENST00000607020 CFAP126Q5VTH2 177 aa9.77□□□□□ -0.85
SSBP4-214ENST00000607020 Q8N3U1 123 aa9.77□□□□□ -0.85
SSBP4-214ENST00000607020 TMSB15BA0A087X1C1 80 aa9.76□□□□□ -0.85
SSBP4-214ENST00000607020 NDUFS6O75380 124 aaKnown RBP9.76□□□□□ -0.85
SSBP4-214ENST00000607020 MGST1P10620 155 aaKnown RBP9.76□□□□□ -0.85
SSBP4-214ENST00000607020 DNLZQ5SXM8 178 aa9.76□□□□□ -0.85
SSBP4-214ENST00000607020 DAZ4Q86SG3 579 aaKnown RBP9.76□□□□□ -0.85
SSBP4-214ENST00000607020 PTH2Q96A98 100 aa9.76□□□□□ -0.85
SSBP4-214ENST00000607020 RMI2Q96E14 147 aa9.76□□□□□ -0.85
SSBP4-214ENST00000607020 DAZAP1Q96EP5 407 aaKnown RBP9.76□□□□□ -0.85
SSBP4-214ENST00000607020 PARLQ9H300 379 aa9.76□□□□□ -0.85
SSBP4-214ENST00000607020 DAZ3Q9NR90 486 aaKnown RBP9.76□□□□□ -0.85
SSBP4-214ENST00000607020 GRIFINA4D1Z8 144 aa9.75□□□□□ -0.85
SSBP4-214ENST00000607020 PGPEP1LA6NFU8 196 aa9.75□□□□□ -0.85
SSBP4-214ENST00000607020 RPL37AP61513 92 aaKnown RBP9.75□□□□□ -0.85
SSBP4-214ENST00000607020 ZNF876PQ49A33 203 aa9.75□□□□□ -0.85
SSBP4-214ENST00000607020 IL36BQ9NZH7 164 aa9.75□□□□□ -0.85
SSBP4-214ENST00000607020 LRP2P98164 4655 aa9.75□□□□□ -0.85
SSBP4-214ENST00000607020 PKHD1L1Q86WI1 4243 aa9.74□□□□□ -0.85
SSBP4-214ENST00000607020 H3BVH4 76 aa9.74□□□□□ -0.85
SSBP4-214ENST00000607020 HNRNPA3P51991 378 aaKnown RBP9.74□□□□□ -0.85
SSBP4-214ENST00000607020 CEBPGP53567 150 aa9.74□□□□□ -0.85
SSBP4-214ENST00000607020 RPL19P84098 196 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms