RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 TRBV30A0A0K0K1B3 111 aa4.87□□□□□ -1.63
SRGAP2-211ENST00000604423 LY6LH3BQJ8 138 aa4.87□□□□□ -1.63
SRGAP2-211ENST00000604423 LEPROTO15243 131 aa4.87□□□□□ -1.63
SRGAP2-211ENST00000604423 BRI3O95415 125 aa4.87□□□□□ -1.63
SRGAP2-211ENST00000604423 C9orf153Q5TBE3 101 aa4.87□□□□□ -1.63
SRGAP2-211ENST00000604423 IGFL2Q6UWQ7 119 aa4.87□□□□□ -1.63
SRGAP2-211ENST00000604423 MUSTN1Q8IVN3 82 aa4.87□□□□□ -1.63
SRGAP2-211ENST00000604423 C1orf210Q8IVY1 113 aa4.87□□□□□ -1.63
SRGAP2-211ENST00000604423 RNASE6Q93091 150 aaKnown RBP4.87□□□□□ -1.63
SRGAP2-211ENST00000604423 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
SRGAP2-211ENST00000604423 ARRDC1-AS1Q9H2J1 176 aa4.87□□□□□ -1.63
SRGAP2-211ENST00000604423 IGHV3OR16-13A0A075B7E8 117 aa4.86□□□□□ -1.63
SRGAP2-211ENST00000604423 IGHV3-74A0A0B4J1X5 117 aa4.86□□□□□ -1.63
SRGAP2-211ENST00000604423 FAM236AA0A1B0GUQ0 79 aa4.86□□□□□ -1.63
SRGAP2-211ENST00000604423 FAM236BA0A1B0GV22 79 aa4.86□□□□□ -1.63
SRGAP2-211ENST00000604423 TRIAP1O43715 76 aa4.86□□□□□ -1.63
SRGAP2-211ENST00000604423 NDPQ00604 133 aa4.86□□□□□ -1.63
SRGAP2-211ENST00000604423 C15orf32Q32M92 178 aa4.86□□□□□ -1.63
SRGAP2-211ENST00000604423 ZNF876PQ49A33 203 aa4.86□□□□□ -1.63
SRGAP2-211ENST00000604423 SPANXDQ9BXN6 97 aa4.86□□□□□ -1.63
SRGAP2-211ENST00000604423 ZNF256Q9Y2P7 627 aaPredicted RBP4.86□□□□□ -1.63
SRGAP2-211ENST00000604423 LENEPQ9Y5L5 61 aa4.86□□□□□ -1.63
SRGAP2-211ENST00000604423 ICOSQ9Y6W8 199 aa4.86□□□□□ -1.63
SRGAP2-211ENST00000604423 IGHV3-64A0A075B6Q5 118 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 IGHV3-49A0A0A0MS15 119 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 TRBV7-7A0A0K0K1E9 115 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 IGIPA6NJ69 53 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 VCYO14598 125 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 TSHBP01222 138 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 ID1P41134 155 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 RPL39P62891 51 aaKnown RBP4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 ECSCRQ19T08 205 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 C9orf139Q6ZV77 190 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 C3orf56Q8N813 242 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 ZNRF2Q8NHG8 242 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 LINC01600Q96MT4 127 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 SDHAF1A6NFY7 115 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 F5H697 171 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 SPRY2O43597 315 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 ELANEP08246 267 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 PRR9Q5T870 116 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 AMELXQ99217 191 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 SPXQ9BT56 116 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 PPDPFQ9H3Y8 114 aa4.85□□□□□ -1.63
SRGAP2-211ENST00000604423 TMEM223A0PJW6 202 aa4.84□□□□□ -1.63
SRGAP2-211ENST00000604423 DEFB109BQ30KR1 87 aa4.84□□□□□ -1.63
SRGAP2-211ENST00000604423 DEFB104AQ8WTQ1 72 aa4.84□□□□□ -1.63
SRGAP2-211ENST00000604423 NRGNQ92686 78 aa4.84□□□□□ -1.63
SRGAP2-211ENST00000604423 EEF1AKMT3Q96AZ1 226 aa4.84□□□□□ -1.63
SRGAP2-211ENST00000604423 DNAJC30Q96LL9 226 aa4.84□□□□□ -1.63
SRGAP2-211ENST00000604423 LINC00477Q96M19 166 aa4.84□□□□□ -1.63
SRGAP2-211ENST00000604423 LINC01587Q99440 93 aa4.84□□□□□ -1.63
SRGAP2-211ENST00000604423 ZFHX4Q86UP3 3567 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 DMDP11532 3685 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 A0A0J9YX75 114 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 H7C423 109 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 IGHV1-69P01742 117 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 ACYP1P07311 99 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 PRSS2P07478 247 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 LY6DQ14210 128 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 C5orf47Q569G3 176 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 CLEC19AQ6UXS0 136 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 GPHB5Q86YW7 130 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 FAM110DQ8TAY7 271 aaPredicted RBP4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 DUX3Q96PT4 197 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 IMUPQ9GZP8 106 aa4.84□□□□□ -1.64
SRGAP2-211ENST00000604423 ARHGAP32A7KAX9 2087 aa4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 CFAP47Q6ZTR5 3102 aa4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 TRGV11A0A075B6L2 103 aa4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 J3KT08 172 aa4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 OVOL1O14753 267 aa4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 UQCRQO14949 82 aa4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 NDUFA7O95182 113 aa4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 RNASE4P34096 147 aaKnown RBP4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 SUMO4Q6EEV6 95 aa4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 C3orf22Q8N5N4 141 aa4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 WWC2-AS2Q96NR7 200 aa4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 TIMM21Q9BVV7 248 aa4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 CSDC2Q9Y534 153 aaKnown RBP4.83□□□□□ -1.64
SRGAP2-211ENST00000604423 A0A0J9YXY3 114 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 B9A039 149 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 LYNX1G3V0Z9 82 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 LST1O00453 97 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 ATP5G1P05496 136 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 LINC00694P0DN24 101 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 LYNX1P0DP58 116 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 UBE2E1P51965 193 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 RHOHQ15669 191 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 DSPP15924 2871 aaKnown RBP4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 IGHV4OR15-8A0A075B7B6 117 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 A0A087WW49 117 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 TRAV8-3A0A0A6YYJ7 113 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 TRBV7-1A0A0A6YYK4 115 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 IGHV7-81A0A0B4J1V7 117 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 CLPSL1A2RUU4 121 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 E7EQL1 145 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 TECTAO75443 2155 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 ZNF22P17026 224 aaPredicted RBP4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 POLR2KP53803 58 aaKnown RBP4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 NSUN5P1Q3KNT7 163 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms