RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 SVEP1Q4LDE5 3571 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 GOLGA3Q08378 1498 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 ARAP1Q96P48 1450 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 C2CD3Q4AC94 2353 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 TRBV7-1A0A0A6YYK4 115 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 A0A1B0GW64 132 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 TCRBV3S1A0A5B6 114 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 TMEM238C9JI98 176 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 M0R3E3 92 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 PGRMC1O00264 195 aaKnown RBP-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 TCRAP04437 139 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 SLC25A6P12236 298 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 NPC2P61916 151 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 LSM3P62310 102 aaKnown RBP-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 INSL4Q14641 139 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 OR8B8Q15620 311 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 Q5VSD8 79 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 C3orf33Q6P1S2 294 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 SLC25A26Q70HW3 274 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 THEM6Q8WUY1 208 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 IFI27L1Q96BM0 104 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 CCDC32Q9BV29 185 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 METTL1Q9UBP6 276 aaKnown RBP-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 PRO0255Q9UI72 69 aa-0.72□□□□□ -2.52
TUBE1-205ENST00000603651 MYH9P35579 1960 aaKnown RBP-0.72□□□□□ -2.53
TUBE1-205ENST00000603651 NBPF19A0A087WUL8 3843 aa-0.72□□□□□ -2.53
TUBE1-205ENST00000603651 PNMA8CA0A1B0GUJ8 204 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 TMEM14DPA8MWL7 114 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 G3V318 75 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 ACYP2P14621 99 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 PLGLB1Q02325 96 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 SSBP1Q04837 148 aaKnown RBP-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 SPAG11BQ08648 103 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 HSD17B12Q53GQ0 312 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 FAM74A4Q5TZK3 123 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 CYP2G1PQ6ZSU1 146 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 UBE2DNLQ8IWF7 75 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 C4orf33Q8N1A6 199 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 VPS25Q9BRG1 176 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 CNFNQ9BYD5 112 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 MED23Q9ULK4 1368 aa-0.73□□□□□ -2.53
TUBE1-205ENST00000603651 MXRA5Q9NR99 2828 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 SETD2Q9BYW2 2564 aaPredicted RBP-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 NRXN2Q9P2S2 1712 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 TGP01266 2768 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 TRGV1A0A0A0MS02 117 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 TRAV2A0A0B4J234 112 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 GCHFRP30047 84 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 SPRR2BP35325 72 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 RBM3P98179 157 aaKnown RBP-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 NDUFA11Q86Y39 141 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 C20orf197Q8N268 126 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 COX7B2Q8TF08 81 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 GID8Q9NWU2 228 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 TAS2R8Q9NYW2 309 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 CCDC171Q6TFL3 1326 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 ATRQ13535 2644 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 KDM5CP41229 1560 aa-0.74□□□□□ -2.53
TUBE1-205ENST00000603651 ARFGEF1Q9Y6D6 1849 aa-0.75□□□□□ -2.53
TUBE1-205ENST00000603651 FAM107AO95990 144 aa-0.75□□□□□ -2.53
TUBE1-205ENST00000603651 SPRR1AP35321 89 aa-0.75□□□□□ -2.53
TUBE1-205ENST00000603651 MRPS15P82914 257 aaKnown RBP-0.75□□□□□ -2.53
TUBE1-205ENST00000603651 SLC48A1Q6P1K1 146 aa-0.75□□□□□ -2.53
TUBE1-205ENST00000603651 SLC35B3Q9H1N7 401 aa-0.75□□□□□ -2.53
TUBE1-205ENST00000603651 BATF3Q9NR55 127 aa-0.75□□□□□ -2.53
TUBE1-205ENST00000603651 DNAJC15Q9Y5T4 150 aa-0.75□□□□□ -2.53
TUBE1-205ENST00000603651 V9GYV3 84 aa-0.75□□□□□ -2.53
TUBE1-205ENST00000603651 SIPA1L3O60292 1781 aaPredicted RBP-0.75□□□□□ -2.53
TUBE1-205ENST00000603651 PARP14Q460N5 1801 aa-0.75□□□□□ -2.53
TUBE1-205ENST00000603651 XIRP1Q702N8 1843 aaKnown RBP-0.75□□□□□ -2.53
TUBE1-205ENST00000603651 CNOT1A5YKK6 2376 aaKnown RBP-0.76□□□□□ -2.53
TUBE1-205ENST00000603651 A0A0D9SFI3 127 aa-0.76□□□□□ -2.53
TUBE1-205ENST00000603651 E7EQ34 232 aa-0.76□□□□□ -2.53
TUBE1-205ENST00000603651 E2F6O75461 281 aa-0.76□□□□□ -2.53
TUBE1-205ENST00000603651 HIST1H1BP16401 226 aaKnown RBP-0.76□□□□□ -2.53
TUBE1-205ENST00000603651 TRIQKQ629K1 86 aa-0.76□□□□□ -2.53
TUBE1-205ENST00000603651 MNS1Q8NEH6 495 aa-0.76□□□□□ -2.53
TUBE1-205ENST00000603651 DYNLRB2Q8TF09 96 aa-0.76□□□□□ -2.53
TUBE1-205ENST00000603651 CCDC115Q96NT0 180 aa-0.76□□□□□ -2.53
TUBE1-205ENST00000603651 EPPK1P58107 5090 aaKnown RBP-0.76□□□□□ -2.53
TUBE1-205ENST00000603651 BIRC6Q9NR09 4857 aa-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 USP9YO00507 2555 aaPredicted RBP-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 CSPG4Q6UVK1 2322 aa-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 MUC22E2RYF6 1773 aaPredicted RBP-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 ZMYM4Q5VZL5 1548 aa-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 UHRF1BP1LA0JNW5 1464 aa-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 ROCK1Q13464 1354 aa-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 TRBV10-3A0A0K0K1G6 114 aa-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 DEGS1O15121 323 aa-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 SPINK8P0C7L1 97 aa-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 PSPHP78330 225 aa-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 TMEM91Q6ZNR0 172 aa-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 SNX29P2Q8IUI4 249 aa-0.77□□□□□ -2.53
TUBE1-205ENST00000603651 SPTBN1Q01082 2364 aaKnown RBP-0.78□□□□□ -2.53
TUBE1-205ENST00000603651 PRKDCP78527 4128 aaKnown RBP-0.78□□□□□ -2.53
TUBE1-205ENST00000603651 G0S2P27469 103 aa-0.78□□□□□ -2.53
TUBE1-205ENST00000603651 Q8IZM0 81 aa-0.78□□□□□ -2.53
TUBE1-205ENST00000603651 OR9Q1Q8NGQ5 310 aa-0.78□□□□□ -2.53
TUBE1-205ENST00000603651 PCBD2Q9H0N5 130 aa-0.78□□□□□ -2.53
TUBE1-205ENST00000603651 ATPIF1Q9UII2 106 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms