RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	POM121L12	Q8N7R1	296 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	TOMM6	Q96B49	74 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	USMG5	Q96IX5	58 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	C20orf173	Q96LM9	149 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	DPH3P1	Q9H4G8	78 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	ESM1	Q9NQ30	184 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	IGHV3-49	A0A0A0MS15	119 aa		11.61	□□□□□ -0.55
CELF4-223	ENST00000603232		H7C1H1	209 aa		11.61	□□□□□ -0.55
CELF4-223	ENST00000603232	PPP1R17	O96001	155 aa		11.61	□□□□□ -0.55
CELF4-223	ENST00000603232	SUMO2	P61956	95 aa	Known RBP	11.61	□□□□□ -0.55
CELF4-223	ENST00000603232		Q6YL49	198 aa		11.61	□□□□□ -0.55
CELF4-223	ENST00000603232	OR10J6P	Q8NGY7	276 aa		11.61	□□□□□ -0.55
CELF4-223	ENST00000603232	TRAV26-2	A0A0B4J265	109 aa		11.6	□□□□□ -0.55
CELF4-223	ENST00000603232	TMEM219	Q86XT9	240 aa		11.6	□□□□□ -0.55
CELF4-223	ENST00000603232	FOXI2	Q6ZQN5	318 aa		11.6	□□□□□ -0.55
CELF4-223	ENST00000603232	DNAJC9-AS1	A6NH13	148 aa		11.59	□□□□□ -0.55
CELF4-223	ENST00000603232	ASIP	P42127	132 aa		11.59	□□□□□ -0.55
CELF4-223	ENST00000603232	RPL32	P62910	135 aa	Known RBP	11.59	□□□□□ -0.55
CELF4-223	ENST00000603232		Q6ZQT7	251 aa		11.59	□□□□□ -0.55
CELF4-223	ENST00000603232	NEXN-AS1	Q8NBZ9	246 aa		11.59	□□□□□ -0.55
CELF4-223	ENST00000603232	RASL10A	Q92737	203 aa		11.59	□□□□□ -0.55
CELF4-223	ENST00000603232	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.59	□□□□□ -0.55
CELF4-223	ENST00000603232	NHP2	Q9NX24	153 aa	Known RBP	11.59	□□□□□ -0.55
CELF4-223	ENST00000603232	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.59	□□□□□ -0.55
CELF4-223	ENST00000603232		A0A1B0GWB2	263 aa		11.58	□□□□□ -0.55
CELF4-223	ENST00000603232	LINC01549	A6NIU2	74 aa		11.58	□□□□□ -0.55
CELF4-223	ENST00000603232	NXPH4	O95158	308 aa		11.58	□□□□□ -0.55
CELF4-223	ENST00000603232	C12orf74	Q32Q52	190 aa		11.58	□□□□□ -0.55
CELF4-223	ENST00000603232	TRBV7-3	A0A075B6L6	115 aa		11.58	□□□□□ -0.56
CELF4-223	ENST00000603232		F8W1H4	67 aa		11.58	□□□□□ -0.56
CELF4-223	ENST00000603232	IGHG2	P01859	326 aa		11.58	□□□□□ -0.56
CELF4-223	ENST00000603232	UNQ9165/PRO28630	Q6UXU0	137 aa		11.58	□□□□□ -0.56
CELF4-223	ENST00000603232	SCGB1A1	P11684	91 aa		11.57	□□□□□ -0.56
CELF4-223	ENST00000603232	RPL24	P83731	157 aa	Known RBP	11.57	□□□□□ -0.56
CELF4-223	ENST00000603232	WFDC2	Q14508	124 aa		11.57	□□□□□ -0.56
CELF4-223	ENST00000603232	SCGB3A1	Q96QR1	104 aa		11.56	□□□□□ -0.56
CELF4-223	ENST00000603232	PRO0461	Q9UI25	63 aa		11.56	□□□□□ -0.56
CELF4-223	ENST00000603232	SCGB2A2	Q13296	93 aa		11.56	□□□□□ -0.56
CELF4-223	ENST00000603232	ZNF418	Q8TF45	676 aa	Predicted RBP	11.56	□□□□□ -0.56
CELF4-223	ENST00000603232	PHLDA3	Q9Y5J5	127 aa		11.56	□□□□□ -0.56
CELF4-223	ENST00000603232	C2CD3	Q4AC94	2353 aa		11.55	□□□□□ -0.56
CELF4-223	ENST00000603232	IGHV4OR15-8	A0A075B7B6	117 aa		11.55	□□□□□ -0.56
CELF4-223	ENST00000603232		A0A087WW49	117 aa		11.55	□□□□□ -0.56
CELF4-223	ENST00000603232		A6NDX4	124 aa		11.55	□□□□□ -0.56
CELF4-223	ENST00000603232	S100A4	P26447	101 aa	Known RBP	11.55	□□□□□ -0.56
CELF4-223	ENST00000603232	HILS1	P60008	231 aa		11.55	□□□□□ -0.56
CELF4-223	ENST00000603232	ANXA2R	Q3ZCQ2	193 aa		11.55	□□□□□ -0.56
CELF4-223	ENST00000603232	SAMD13	Q5VXD3	122 aa		11.55	□□□□□ -0.56
CELF4-223	ENST00000603232	ZNF580	Q9UK33	172 aa		11.55	□□□□□ -0.56
CELF4-223	ENST00000603232	VPREB3	Q9UKI3	123 aa		11.54	□□□□□ -0.56
CELF4-223	ENST00000603232	MYMX	A0A1B0GTQ4	84 aa		11.54	□□□□□ -0.56
CELF4-223	ENST00000603232	OR11H12	B2RN74	326 aa		11.54	□□□□□ -0.56
CELF4-223	ENST00000603232	TRBV12-3	P01733	135 aa		11.54	□□□□□ -0.56
CELF4-223	ENST00000603232	RNASE3	P12724	160 aa	Known RBP	11.54	□□□□□ -0.56
CELF4-223	ENST00000603232	RRN3P1	Q2M238	152 aa		11.54	□□□□□ -0.56
CELF4-223	ENST00000603232	CD300E	Q496F6	205 aa	Predicted RBP	11.54	□□□□□ -0.56
CELF4-223	ENST00000603232	OR11H1	Q8NG94	326 aa		11.54	□□□□□ -0.56
CELF4-223	ENST00000603232	OR11H2	Q8NH07	326 aa		11.54	□□□□□ -0.56
CELF4-223	ENST00000603232	ZNF479	Q96JC4	524 aa		11.54	□□□□□ -0.56
CELF4-223	ENST00000603232	KLLN	B2CW77	178 aa		11.53	□□□□□ -0.56
CELF4-223	ENST00000603232	CIDEA	O60543	219 aa		11.53	□□□□□ -0.56
CELF4-223	ENST00000603232	AZU1	P20160	251 aa		11.53	□□□□□ -0.56
CELF4-223	ENST00000603232	C2orf66	Q6UXQ4	117 aa		11.53	□□□□□ -0.56
CELF4-223	ENST00000603232	C14orf178	Q8N769	122 aa	Predicted RBP	11.53	□□□□□ -0.56
CELF4-223	ENST00000603232	SIGMAR1	Q99720	223 aa		11.53	□□□□□ -0.56
CELF4-223	ENST00000603232	SPATA25	Q9BR10	227 aa		11.53	□□□□□ -0.56
CELF4-223	ENST00000603232	KIF25-AS1	Q9Y6Z4	181 aa		11.53	□□□□□ -0.56
CELF4-223	ENST00000603232		K7EMT4	169 aa		11.52	□□□□□ -0.56
CELF4-223	ENST00000603232	IGLV1-40	P01703	118 aa		11.52	□□□□□ -0.56
CELF4-223	ENST00000603232	KRTAP21-3	Q3LHN1	58 aa		11.52	□□□□□ -0.56
CELF4-223	ENST00000603232	BAALC	Q8WXS3	180 aa		11.52	□□□□□ -0.56
CELF4-223	ENST00000603232	LINC00527	Q9UJ94	153 aa		11.52	□□□□□ -0.56
CELF4-223	ENST00000603232	PRIMA1	Q86XR5	153 aa		11.52	□□□□□ -0.57
CELF4-223	ENST00000603232	RPL39L	Q96EH5	51 aa	Known RBP	11.52	□□□□□ -0.57
CELF4-223	ENST00000603232	SPAG8	Q99932	426 aa	Predicted RBP	11.52	□□□□□ -0.57
CELF4-223	ENST00000603232	AGRN	O00468	2067 aa		11.51	□□□□□ -0.57
CELF4-223	ENST00000603232	GAGE12H	A6NDE8	117 aa		11.51	□□□□□ -0.57
CELF4-223	ENST00000603232	LINC00315	P59091	139 aa		11.51	□□□□□ -0.57
CELF4-223	ENST00000603232	PAPPA-AS1	Q5QFB9	102 aa		11.51	□□□□□ -0.57
CELF4-223	ENST00000603232		Q6ZS46	218 aa		11.51	□□□□□ -0.57
CELF4-223	ENST00000603232	HIST1H4G	Q99525	98 aa		11.51	□□□□□ -0.57
CELF4-223	ENST00000603232	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.51	□□□□□ -0.57
CELF4-223	ENST00000603232	ATR	Q13535	2644 aa		11.51	□□□□□ -0.57
CELF4-223	ENST00000603232		H3BMG7	143 aa		11.5	□□□□□ -0.57
CELF4-223	ENST00000603232	TMEM86B	Q8N661	226 aa		11.5	□□□□□ -0.57
CELF4-223	ENST00000603232	RHPN1-AS1	Q9BWJ2	59 aa		11.5	□□□□□ -0.57
CELF4-223	ENST00000603232	DAZ1	Q9NQZ3	744 aa	Known RBP	11.5	□□□□□ -0.57
CELF4-223	ENST00000603232	RNASE4	P34096	147 aa	Known RBP	11.5	□□□□□ -0.57
CELF4-223	ENST00000603232	BLCAP	P62952	87 aa		11.5	□□□□□ -0.57
CELF4-223	ENST00000603232	MORN3	Q6PF18	240 aa	Predicted RBP	11.5	□□□□□ -0.57
CELF4-223	ENST00000603232	PRSS29P	A6NIE9	313 aa		11.49	□□□□□ -0.57
CELF4-223	ENST00000603232	RNASE1	P07998	156 aa	Known RBP	11.49	□□□□□ -0.57
CELF4-223	ENST00000603232	CFHR3	Q02985	330 aa		11.49	□□□□□ -0.57
CELF4-223	ENST00000603232	SH2D6	Q7Z4S9	175 aa		11.49	□□□□□ -0.57
CELF4-223	ENST00000603232	ODF3	Q96PU9	254 aa		11.49	□□□□□ -0.57
CELF4-223	ENST00000603232	GTSF1L	Q9H1H1	148 aa		11.49	□□□□□ -0.57
CELF4-223	ENST00000603232	GNRH2	O43555	120 aa		11.48	□□□□□ -0.57
CELF4-223	ENST00000603232	LGALS1	P09382	135 aa	Known RBP	11.48	□□□□□ -0.57
CELF4-223	ENST00000603232	POLR2K	P53803	58 aa	Known RBP	11.48	□□□□□ -0.57
CELF4-223	ENST00000603232	MUC4	Q99102	2169 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms